Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 8.9e-193 676.8 348 100.0
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 8.4e-191 670.2 348 99.1
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 1.3e-186 656.4 348 96.0
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 2.8e-186 655.2 348 95.7
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 4.0e-185 651.4 348 95.4
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.9e-159 565.5 348 82.2
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.9e-159 565.5 348 82.2
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 6.5e-159 564.3 348 82.2
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 1.4e-158 563.1 348 80.7
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 5.5e-158 561.2 348 82.2
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 9.3e-158 560.5 332 83.7
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 2.7e-157 558.9 348 81.3
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 5.1e-156 554.7 323 85.4
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.5e-155 552.4 348 80.7
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 3.3e-155 552.0 331 82.5
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 9.7e-155 550.4 348 81.0
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.2e-154 549.3 348 79.6
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.2e-154 549.3 348 79.9
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 8.2e-154 547.4 348 79.6
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 1.4e-153 546.6 348 79.9
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 2.4e-153 545.8 348 79.9
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 2.4e-153 545.8 348 79.3
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 4.1e-153 545.0 348 79.0
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 5.3e-153 544.7 348 78.7
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 5.3e-153 544.7 348 77.9
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 9.0e-153 543.9 348 79.9
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 9.0e-153 543.9 348 79.6
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.5e-152 543.1 348 79.9
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 2.0e-152 542.7 349 77.7
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 4.5e-152 541.6 348 78.7
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 7.7e-152 540.8 348 79.3
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 2.2e-151 539.3 348 78.4
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.2e-151 539.3 348 78.4
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 2.2e-151 539.3 353 77.1
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 2.9e-151 538.9 319 84.3
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 2.9e-151 538.9 348 78.7
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 3.8e-151 538.5 348 77.9
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 5.0e-151 538.1 347 77.2
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 5.0e-151 538.1 348 77.9
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.4e-150 536.6 348 77.6
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 2.5e-150 535.8 356 76.1
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 3.2e-150 535.4 348 76.4
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 3.2e-150 535.4 353 76.2
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 5.5e-150 534.6 348 77.6
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 5.5e-150 534.6 348 77.6
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 7.2e-150 534.3 348 78.2
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 7.2e-150 534.3 349 78.5
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 7.2e-150 534.3 355 78.3
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.2e-149 533.5 348 77.6
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 2.7e-149 532.3 353 76.8
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 2.7e-149 532.3 348 78.4
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 4.6e-149 531.6 346 77.2
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 1.4e-148 530.0 352 77.3
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.8e-148 529.6 346 77.2
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 3.0e-148 528.9 353 76.2
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 5.1e-148 528.1 348 77.6
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 6.7e-148 527.7 348 76.1
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 1.5e-147 526.6 351 75.2
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.5e-147 526.6 348 77.3
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 2.0e-147 526.2 334 80.2
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 2.5e-147 525.8 348 75.9
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 2.5e-147 525.8 348 77.0
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 3.3e-147 525.4 353 76.8
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.3e-147 525.4 348 77.0
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 4.3e-147 525.0 348 75.6
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 3.7e-146 521.9 359 74.9
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.1e-145 520.4 348 74.4
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.1e-145 520.4 348 75.9
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.4e-145 520.0 348 75.9
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 2.4e-145 519.2 351 76.4
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 4.1e-145 518.5 376 71.3
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 6.9e-145 517.7 316 81.0
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 4.5e-144 515.0 363 73.8
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 5.9e-144 514.6 351 76.4
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 1.0e-143 513.8 331 77.6
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.0e-143 513.8 348 75.6
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 1.3e-143 513.5 312 80.8
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.7e-143 513.1 353 75.6
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.2e-143 512.7 348 73.9
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 2.9e-143 512.3 328 78.0
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 3.8e-143 511.9 348 72.4
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 3.8e-143 511.9 348 72.4
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 3.8e-143 511.9 348 72.7
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 5.0e-143 511.5 348 75.9
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.0e-143 511.5 353 75.4
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 8.5e-143 510.8 349 74.2
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 8.5e-143 510.8 348 74.7
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.1e-142 510.4 348 74.1
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 2.5e-142 509.2 348 72.7
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 4.2e-142 508.4 348 74.1
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 5.5e-142 508.1 348 72.4
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 7.2e-142 507.7 351 72.9
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 9.4e-142 507.3 348 73.6
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 9.4e-142 507.3 351 72.9
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 2.1e-141 506.1 348 73.6
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 2.1e-141 506.1 348 73.6
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 2.1e-141 506.1 348 73.6
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 2.7e-141 505.8 352 72.2
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 6.1e-141 504.6 349 71.9
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 7.9e-141 504.2 349 72.8
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.4e-140 503.4 355 71.8
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 3.0e-140 502.3 354 72.3
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 3.9e-140 501.9 353 72.0
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 8.8e-140 500.7 348 72.1
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 8.8e-140 500.7 348 72.1
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 1.1e-139 500.4 351 71.5
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 2.2e-138 496.1 348 71.8
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 2.8e-138 495.7 354 71.8
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 3.7e-138 495.4 369 69.9
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 8.2e-138 494.2 348 71.6
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 5.3e-137 491.5 351 74.4
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.2e-134 482.3 349 70.5
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.6e-131 472.6 283 80.2
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 2.6e-131 472.6 389 65.8
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 7.5e-131 471.1 349 68.5
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 1.8e-129 466.5 348 68.7
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 2.4e-129 466.1 348 70.1
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 3.5e-128 462.2 352 67.6
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 1.0e-127 460.7 352 67.0
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-127 459.9 351 71.5
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.7e-127 459.9 325 72.9
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 2.2e-127 459.5 318 70.1
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 6.5e-127 458.0 349 69.9
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 5.5e-126 454.9 326 71.2
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 5.5e-126 454.9 352 66.8
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 2.1e-125 453.0 348 67.5
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 2.1e-125 453.0 348 67.5
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.0e-124 449.1 320 68.1
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 4.0e-124 448.7 320 69.1
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.5e-123 446.8 300 76.0
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.5e-123 446.8 300 76.0
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 2.2e-122 443.0 335 69.6
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 7.0e-121 438.0 318 66.7
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.0e-115 419.9 340 62.1
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 5.4e-113 411.8 348 60.1
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 7.0e-113 411.4 333 61.9
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 1.3e-111 407.1 278 74.1
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 8.6e-111 404.4 215 96.3
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 1.4e-105 387.1 231 81.0
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.9e-98 362.1 228 76.3
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 1.9e-94 350.1 256 68.4
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 1.7e-90 337.0 199 81.4
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 7.3e-86 321.6 298 57.0
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 5.2e-76 288.9 248 61.3
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 9.6e-70 268.1 185 68.1
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 9.6e-70 268.1 185 68.1
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 2.8e-69 266.5 185 74.6
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.2e-56 224.6 165 64.2
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 5.1e-55 219.2 131 80.9
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.5e-54 217.6 122 83.6
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 2.5e-54 216.9 119 85.7
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 2.4e-52 210.3 123 82.1
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 6.9e-44 182.2 164 60.4
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 3.4e-43 179.9 164 60.4
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 1.1e-41 174.9 164 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 6.7e-39 165.6 129 62.8
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 4.8e-29 132.9 179 45.3
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 8.2e-29 132.1 118 63.6
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 5.0e-26 122.9 92 66.3
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 1.9e-25 120.9 70 81.4
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 7.2e-25 119.0 92 68.5
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 1.2e-19 101.7 78 62.8
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 2.6e-19 100.5 71 69.0
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.5e-18 95.9 118 46.6
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 4.4e-14 83.2 78 53.8
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 4.4e-14 83.2 145 42.1
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 6.1e-08 62.8 51 60.8
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 1.8e-07 61.2 42 71.4
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 4.0e-07 60.1 36 69.4


User provided reference genes

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