Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 6.8e-160 567.4 309 100.0
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 6.8e-152 540.8 316 94.9
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 1.1e-88 330.9 294 65.3
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 1.3e-86 323.9 295 60.0
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 8.5e-86 321.2 307 57.7
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 2.2e-81 306.6 306 61.8
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 2.6e-79 299.7 207 69.1
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 4.5e-79 298.9 198 72.2
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 1.0e-78 297.7 200 72.0
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 1.7e-78 297.0 304 54.6
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.7e-78 297.0 253 59.7
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 2.2e-78 296.6 268 60.1
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 1.1e-77 294.3 207 72.0
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 1.9e-77 293.5 228 64.5
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 1.9e-77 293.5 232 65.1
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 3.2e-77 292.7 252 68.3
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 2.1e-76 290.0 219 68.0
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 3.6e-76 289.3 253 60.1
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 3.6e-76 289.3 194 70.6
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 7.9e-76 288.1 253 59.3
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 1.0e-75 287.7 236 62.7
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 1.0e-75 287.7 202 68.8
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 1.8e-75 287.0 313 58.8
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 2.3e-75 286.6 267 57.3
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 3.9e-75 285.8 286 55.9
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 1.5e-74 283.9 245 62.0
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 1.5e-74 283.9 260 60.8
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 2.6e-74 283.1 208 65.4
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 2.6e-74 283.1 260 61.2
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 3.3e-74 282.7 206 67.0
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 3.3e-74 282.7 236 61.4
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 4.4e-74 282.3 208 65.4
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 4.4e-74 282.3 205 67.8
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 5.7e-74 282.0 185 71.9
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 5.7e-74 282.0 253 64.4
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 7.4e-74 281.6 228 64.0
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 9.7e-74 281.2 212 62.7
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 1.3e-73 280.8 255 59.2
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.3e-73 280.8 231 62.8
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 2.8e-73 279.6 181 74.0
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 2.8e-73 279.6 242 59.1
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 2.8e-73 279.6 253 59.3
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 3.7e-73 279.3 190 70.0
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 8.2e-73 278.1 185 69.7
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 1.8e-72 276.9 201 67.7
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 2.4e-72 276.6 207 65.7
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 2.4e-72 276.6 207 65.7
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 3.1e-72 276.2 195 66.2
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 4.1e-72 275.8 250 60.0
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 1.2e-71 274.2 178 72.5
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 1.2e-71 274.2 178 72.5
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 1.2e-71 274.2 178 72.5
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 1.6e-71 273.9 244 57.8
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 1.6e-71 273.9 176 71.6
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 1.6e-71 273.9 208 63.0
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 1.6e-71 273.9 178 72.5
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 3.5e-71 272.7 253 53.8
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 3.5e-71 272.7 176 72.7
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 4.5e-71 272.3 204 66.7
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 4.5e-71 272.3 234 60.3
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 5.9e-71 271.9 179 70.9
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 5.9e-71 271.9 178 71.9
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 1.0e-70 271.2 180 70.6
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 1.0e-70 271.2 187 69.0
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 1.3e-70 270.8 282 56.7
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 1.3e-70 270.8 208 63.0
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 1.7e-70 270.4 241 58.9
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 2.9e-70 269.6 208 64.9
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 3.8e-70 269.2 178 70.2
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 3.8e-70 269.2 264 62.9
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 6.5e-70 268.5 234 59.4
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 8.5e-70 268.1 225 59.1
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 1.1e-69 267.7 187 68.4
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 1.1e-69 267.7 228 57.9
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 1.5e-69 267.3 180 69.4
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 1.2e-68 264.2 247 57.1
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 1.2e-68 264.2 255 59.2
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 1.2e-68 264.2 216 63.0
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 1.6e-68 263.8 178 70.2
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 1.6e-68 263.8 221 61.1
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 1.6e-68 263.8 212 61.8
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 3.6e-68 262.7 190 65.3
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 1.4e-67 260.8 305 55.1
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 1.4e-67 260.8 186 67.7
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 5.2e-67 258.8 281 55.9
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 6.7e-67 258.5 253 58.9
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 2.0e-66 256.9 182 65.9
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 2.0e-66 256.9 211 58.8
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 2.6e-66 256.5 176 69.9
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 2.6e-66 256.5 253 56.5
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 1.8e-64 250.4 179 65.9
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 1.0e-62 244.6 188 59.6
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 1.5e-61 240.7 188 66.0
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 3.2e-61 239.6 230 57.0
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 1.4e-59 234.2 175 62.3
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 6.8e-59 231.9 150 71.3
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 7.5e-58 228.4 164 68.3
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 1.0e-54 218.0 230 54.3
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 6.1e-52 208.8 221 52.9
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 3.4e-50 203.0 115 83.5
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 2.4e-48 196.8 126 75.4
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 9.5e-45 184.9 172 55.8
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 1.6e-39 167.5 162 57.4
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 5.2e-35 152.5 119 62.2
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 9.8e-34 148.3 160 45.0
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 9.8e-34 148.3 160 45.0
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 6.0e-31 139.0 160 45.0
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 9.5e-29 131.7 93 63.4
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 4.7e-28 129.4 98 64.3
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 3.7e-25 119.8 143 42.0
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 8.3e-25 118.6 98 52.0
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 1.2e-18 98.2 78 60.3
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 1.1e-16 91.7 98 49.0
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 2.7e-15 87.0 127 40.2
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 1.0e-14 85.1 101 43.6
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 8.6e-14 82.0 72 56.9
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 4.3e-13 79.7 77 51.9
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 4.3e-13 79.7 77 51.9
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 1.5e-10 71.2 88 44.3
BcaB06g25810 Brassica carinata HOM05D006827 ORTHO05D023991 4.9e-09 66.2 41 75.6
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 3.2e-08 63.5 137 29.2
TAR633G1668 Trochodendron aralioides HOM05D006827 ORTHO05D023991 3.5e-07 60.1 42 69.0
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 1.0e-06 58.5 88 35.2


User provided reference genes

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