Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO173G0033 Papaver somniferum HOM05D004585 ORTHO05D005640 1.2e-124 449.9 228 100.0
PSO717G0039 Papaver somniferum HOM05D004585 ORTHO05D005640 3.2e-122 441.8 228 97.4
PSO675G5749 Papaver somniferum HOM05D004585 ORTHO05D005640 6.6e-120 434.1 228 96.5
PSO210G0756 Papaver somniferum HOM05D004585 ORTHO05D005640 2.3e-104 382.5 206 93.7
Dinv20840 Davidia involucrata HOM05D004585 ORTHO05D005640 9.0e-85 317.4 222 73.9
vmacro21510 Vaccinium macrocarpon HOM05D004585 ORTHO05D005640 5.8e-84 314.7 210 73.8
Actinidia18578 Actinidia chinensis HOM05D004585 ORTHO05D005640 2.9e-83 312.4 228 69.7
TAR633G1318 Trochodendron aralioides HOM05D004585 ORTHO05D005640 4.9e-83 311.6 228 68.0
Hma1.2p1_0567F.1_g180100 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 1.4e-82 310.1 228 71.1
TAR633G2635 Trochodendron aralioides HOM05D004585 ORTHO05D005640 3.2e-82 308.9 224 68.3
Cfa011225 Carpinus fangiana HOM05D004585 ORTHO05D005640 5.5e-82 308.1 228 71.1
Haze_02611 Corylus avellana HOM05D004585 ORTHO05D005640 6.1e-81 304.7 228 70.6
Eucgr.G02711 Eucalyptus grandis HOM05D004585 ORTHO05D005640 5.1e-80 301.6 228 68.0
THA.LOC104816458 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 5.1e-80 301.6 227 68.3
Rhsim03G0106100 Rhododendron simsii HOM05D004585 ORTHO05D005640 6.7e-80 301.2 228 68.9
TPR.G4853 Trifolium pratense HOM05D004585 ORTHO05D005640 1.1e-79 300.4 206 73.8
Medtr1g108290 Medicago truncatula HOM05D004585 ORTHO05D005640 1.5e-79 300.1 226 68.6
THA.LOC104823192 Tarenaya hassleriana HOM05D004585 ORTHO05D005640 1.5e-79 300.1 228 68.9
Sed0016970 Sechium edule HOM05D004585 ORTHO05D005640 1.9e-79 299.7 228 69.3
Sed0007729 Sechium edule HOM05D004585 ORTHO05D005640 3.3e-79 298.9 228 67.1
Cfa013557 Carpinus fangiana HOM05D004585 ORTHO05D005640 4.3e-79 298.5 228 68.9
Actinidia06707 Actinidia chinensis HOM05D004585 ORTHO05D005640 5.7e-79 298.1 228 67.5
ClCG08G008100 Citrullus lanatus HOM05D004585 ORTHO05D005640 5.7e-79 298.1 228 66.7
Cc02_g10240 Coffea canephora HOM05D004585 ORTHO05D005640 7.4e-79 297.7 225 68.0
Duzib128G1105 Durio zibethinus HOM05D004585 ORTHO05D005640 1.3e-78 297.0 233 67.0
Gorai.013G013300 Gossypium raimondii HOM05D004585 ORTHO05D005640 1.3e-78 297.0 228 67.1
Oeu027977.1 Olea europaea HOM05D004585 ORTHO05D005640 1.3e-78 297.0 228 65.8
CsaV3_6G004080 Cucumis sativus L. HOM05D004585 ORTHO05D005640 2.2e-78 296.2 228 67.1
Thecc.10G109700 Theobroma cacao HOM05D004585 ORTHO05D005640 2.2e-78 296.2 228 67.5
Thecc.K0008500 Theobroma cacao HOM05D004585 ORTHO05D005640 2.2e-78 296.2 228 67.5
CSS0035600 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 2.8e-78 295.8 228 66.7
MELO3C019883.2 Cucumis melo HOM05D004585 ORTHO05D005640 2.8e-78 295.8 228 66.7
Gohir.A13G011400 Gossypium hirsutum HOM05D004585 ORTHO05D005640 2.8e-78 295.8 228 66.7
Psat6g221600 Pisum sativum HOM05D004585 ORTHO05D005640 3.7e-78 295.4 226 67.7
Ca_04982_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 4.8e-78 295.0 226 66.8
Ca_11096_v3 Cicer arietinum L. HOM05D004585 ORTHO05D005640 4.8e-78 295.0 226 66.8
Hma1.2p1_0026F.1_g016750 Hydrangea macrophylla HOM05D004585 ORTHO05D005640 4.8e-78 295.0 228 68.9
PGR142G4346 Punica granatum HOM05D004585 ORTHO05D005640 4.8e-78 295.0 226 67.7
Thhalv10014607m.g Eutrema salsugineum HOM05D004585 ORTHO05D005640 6.3e-78 294.7 227 66.1
Gohir.D13G012100 Gossypium hirsutum HOM05D004585 ORTHO05D005640 1.1e-77 293.9 228 66.7
Lalb_Chr14g0365991 Lupinus albus HOM05D004585 ORTHO05D005640 1.8e-77 293.1 226 66.8
HanXRQChr14g0456901 Helianthus annuus HOM05D004585 ORTHO05D005640 3.1e-77 292.4 204 71.1
arahy.Tifrunner.gnm1.ann1.CB8VHN Arachis hypogaea HOM05D004585 ORTHO05D005640 5.3e-77 291.6 226 64.6
Sopen06g031130 Solanum pennellii HOM05D004585 ORTHO05D005640 6.9e-77 291.2 228 65.8
Peaxi162Scf00150g00411 Petunia axillaris HOM05D004585 ORTHO05D005640 9.0e-77 290.8 226 65.9
arahy.Tifrunner.gnm1.ann1.48LUDE Arachis hypogaea HOM05D004585 ORTHO05D005640 1.2e-76 290.4 226 65.0
SGA_v2.0_scaffold154G37190 Striga asiatica HOM05D004585 ORTHO05D005640 1.2e-76 290.4 227 65.2
CiPaw.01G204400 Carya illinoinensis HOM05D004585 ORTHO05D005640 1.5e-76 290.0 228 67.5
Sp6g38180 Schrenkiella parvula HOM05D004585 ORTHO05D005640 2.0e-76 289.7 228 64.5
Nitab4.5_0000442g0080 Nicotiana tabacum HOM05D004585 ORTHO05D005640 2.6e-76 289.3 225 66.7
SGA_v2.0_scaffold10G05319 Striga asiatica HOM05D004585 ORTHO05D005640 2.6e-76 289.3 228 66.2
CDE02G2408 Ceratophyllum demersum HOM05D000251 ORTHO05D002506 4.5e-76 288.5 205 68.3
Lj3A931T47 Lonicera japonica HOM05D004585 ORTHO05D005640 4.5e-76 288.5 211 70.1
HanXRQChr10g0319081 Helianthus annuus HOM05D004585 ORTHO05D005640 5.9e-76 288.1 201 72.1
Phvul.005G089300 Phaseolus vulgaris HOM05D004585 ORTHO05D005640 5.9e-76 288.1 226 65.9
GSVIVG01021851001 Vitis vinifera HOM05D004585 ORTHO05D005640 7.7e-76 287.7 228 67.1
TWI38G0710 Tripterygium wilfordii HOM05D004585 ORTHO05D005640 1.0e-75 287.3 228 65.8
Lj6g0005217 Lotus japonicus HOM05D004585 ORTHO05D005640 1.3e-75 287.0 206 68.9
Sabra10G0182000 Salix brachista HOM05D004585 ORTHO05D005640 1.3e-75 287.0 228 67.1
Sopen11g026360 Solanum pennellii HOM05D004585 ORTHO05D005640 1.3e-75 287.0 226 65.5
PGSC0003DMG400007128 Solanum tuberosum HOM05D004585 ORTHO05D005640 1.3e-75 287.0 228 65.4
Potri.010G234800 Populus trichocarpa HOM05D004585 ORTHO05D005640 2.9e-75 285.8 228 66.2
PGSC0003DMG400000462 Solanum tuberosum HOM05D004585 ORTHO05D005640 2.9e-75 285.8 226 65.0
C09p72190 Brassica napus HOM05D004585 ORTHO05D005640 3.8e-75 285.4 228 63.6
BolC9t59963H Brassica oleracea HOM05D004585 ORTHO05D005640 3.8e-75 285.4 228 63.6
CDE04G0123 Ceratophyllum demersum HOM05D004585 ORTHO05D005640 3.8e-75 285.4 204 67.2
ECA238G4124 Erigeron canadensis HOM05D004585 ORTHO05D005640 3.8e-75 285.4 226 66.4
Aa31LG3G3420 Aethionema arabicum HOM05D004585 ORTHO05D005640 6.5e-75 284.6 228 63.6
Nn3g20167 Nelumbo nucifera HOM05D004585 ORTHO05D005640 6.5e-75 284.6 229 64.6
Prupe.1G580700 Prunus persica HOM05D004585 ORTHO05D005640 1.9e-74 283.1 224 69.2
BcaC06g32168 Brassica carinata HOM05D004585 ORTHO05D005640 3.2e-74 282.3 228 63.2
Lalb_Chr22g0354511 Lupinus albus HOM05D004585 ORTHO05D005640 3.2e-74 282.3 226 65.5
CARHR208690 Cardamine hirsuta HOM05D004585 ORTHO05D005640 4.2e-74 282.0 228 63.2
A10p31500 Brassica napus HOM05D004585 ORTHO05D005640 5.5e-74 281.6 228 63.2
BraA10t45196Z Brassica rapa HOM05D004585 ORTHO05D005640 5.5e-74 281.6 228 63.2
Manes.05G202500 Manihot esculenta HOM05D004585 ORTHO05D005640 7.2e-74 281.2 228 64.0
SalBow6G2458 Salvia bowleyana HOM05D004585 ORTHO05D005640 9.4e-74 280.8 247 59.5
Glyma.02G173000 Glycine max HOM05D004585 ORTHO05D005640 1.6e-73 280.0 227 64.3
Glyma.09G111400 Glycine max HOM05D004585 ORTHO05D005640 1.6e-73 280.0 229 65.1
SGA_v2.0_scaffold113G31721 Striga asiatica HOM05D004585 ORTHO05D005640 1.6e-73 280.0 228 62.7
CANSAT56G4487 Cannabis sativa HOM05D004585 ORTHO05D005640 2.1e-73 279.6 224 64.3
Lsat_1_v5_gn_2_86220 Lactuca sativa HOM05D004585 ORTHO05D005640 2.1e-73 279.6 226 63.3
BraA02t04819Z Brassica rapa HOM05D004585 ORTHO05D005640 2.7e-73 279.3 228 62.7
Carub.0006s0352 Capsella rubella HOM05D004585 ORTHO05D005640 2.7e-73 279.3 228 62.7
C02p02000 Brassica napus HOM05D004585 ORTHO05D005640 3.6e-73 278.9 228 63.2
QL04p041242 Quercus lobata HOM05D004585 ORTHO05D005640 6.1e-73 278.1 225 64.0
VMungo1080G1669 Vigna mungo HOM05D004585 ORTHO05D005640 6.1e-73 278.1 206 65.0
AL6G14230 Arabidopsis lyrata HOM05D004585 ORTHO05D005640 7.9e-73 277.7 228 62.3
Sc09g0005570 Simmondsia chinensis HOM05D004585 ORTHO05D005640 7.9e-73 277.7 204 64.2
BcaC03g12939 Brassica carinata HOM05D004585 ORTHO05D005640 1.8e-72 276.6 228 62.7
MSTRG.412 Avicennia marina HOM05D004585 ORTHO05D005640 3.0e-72 275.8 228 61.8
Dinv30656 Davidia involucrata HOM05D004585 ORTHO05D005640 3.9e-72 275.4 228 65.8
MD08G1243300 Malus domestica HOM05D004585 ORTHO05D005640 1.5e-71 273.5 214 65.9
Hund06922 Selenicereus undatus HOM05D004585 ORTHO05D005640 1.5e-71 273.5 203 67.0
Atru.chr12.969 Acer truncatum HOM05D004585 ORTHO05D005640 3.3e-71 272.3 228 64.0
RcHm_v2.0_Chr4g0433501 Rosa chinensis HOM05D004585 ORTHO05D005640 7.4e-71 271.2 223 65.5
AT5G04600 Arabidopsis thaliana HOM05D004585 ORTHO05D005640 1.3e-70 270.4 227 61.2
Cpa.g.sc128.48 Carica papaya HOM05D004585 ORTHO05D005640 1.3e-70 270.4 211 65.9
Ciclev10013752m.g Citrus clementina HOM05D004585 ORTHO05D005640 1.3e-70 270.4 225 64.0
Solyc06g074720.4 Solanum lycopersicum HOM05D004585 ORTHO05D005640 2.2e-70 269.6 212 66.0
Ah.03g136890 Amaranthus hybridus HOM05D004585 ORTHO05D005640 3.7e-70 268.9 186 68.8
Hund13887 Selenicereus undatus HOM05D004585 ORTHO05D005640 8.2e-70 267.7 205 63.9
EL10Ac2g03709 Beta vulgaris HOM05D004585 ORTHO05D005640 1.1e-69 267.3 185 70.8
Ah.16g102420 Amaranthus hybridus HOM05D004585 ORTHO05D005640 1.8e-69 266.5 187 69.5
AUR62003699 Chenopodium quinoa HOM05D004585 ORTHO05D005640 2.4e-69 266.2 188 66.5
Migut.F01706 Erythranthe guttata HOM05D004585 ORTHO05D005640 6.9e-69 264.6 229 61.1
COL.COLO4_33895 Corchorus olitorius HOM05D004585 ORTHO05D005640 9.1e-69 264.2 173 74.6
Nitab4.5_0003470g0110 Nicotiana tabacum HOM05D004585 ORTHO05D005640 2.6e-68 262.7 212 65.6
ATR0068G115 Amborella trichopoda HOM05D004585 ORTHO05D005640 5.9e-68 261.5 205 60.5
FvH4_5g27351 Fragaria vesca HOM05D004585 ORTHO05D005640 1.9e-66 256.5 229 62.4
FAN26G1691 Fragaria x ananassa HOM05D004585 ORTHO05D005640 1.9e-66 256.5 231 61.9
Atru.chr10.1244 Acer truncatum HOM05D004585 ORTHO05D005640 5.5e-66 255.0 185 70.3
EL10Ac4g08678 Beta vulgaris HOM05D004585 ORTHO05D005640 1.2e-65 253.8 173 71.7
Haze_22178 Corylus avellana HOM05D004585 ORTHO05D005640 2.7e-65 252.7 231 62.8
EL10Ac4g08675 Beta vulgaris HOM05D004585 ORTHO05D005640 1.0e-64 250.8 176 70.5
Os08g0412200 Oryza sativa ssp. japonica HOM05D004585 ORTHO05D005640 2.8e-62 242.7 228 55.3
FAN13G1680 Fragaria x ananassa HOM05D005925 ORTHO05D007270 2.4e-61 239.6 262 54.6
FAN18G1621 Fragaria x ananassa HOM05D005925 ORTHO05D007270 2.4e-61 239.6 262 54.6
HPP92_008213 Vanilla planifolia HOM05D004585 ORTHO05D005640 5.3e-61 238.4 227 54.6
CSS0012030 Camellia sinensis var. sinensis HOM05D004585 ORTHO05D005640 2.6e-60 236.1 232 56.9
Medtr4g127330 Medicago truncatula HOM05D004585 ORTHO05D005640 3.5e-60 235.7 194 66.0
COL.COLO4_27310 Corchorus olitorius HOM05D004585 ORTHO05D005640 2.1e-57 226.5 146 73.3
Ciclev10033004m.g Citrus clementina HOM05D004585 ORTHO05D005640 3.7e-54 215.7 145 71.0
DCAR_012470 Daucus carota HOM05D004585 ORTHO05D005640 3.1e-53 212.6 145 71.7
Zm00001eb178930 Zea mays HOM05D004585 ORTHO05D005640 1.3e-51 207.2 204 54.9
Pp3c8_3240 Physcomitrium patens HOM05D004585 ORTHO05D005640 8.0e-49 198.0 219 46.6
Oeu046197.1 Olea europaea HOM05D004585 ORTHO05D005640 1.0e-48 197.6 142 64.8
Mapoly0059s0023 Marchantia polymorpha HOM05D004585 ORTHO05D005640 2.3e-48 196.4 187 51.3
Pp3c3_32540 Physcomitrium patens HOM05D004585 ORTHO05D005640 1.2e-47 194.1 198 48.0
BolC2t06157H Brassica oleracea HOM05D004585 ORTHO05D005640 2.0e-47 193.4 162 60.5
Lj9A82T44 Lonicera japonica HOM05D004585 ORTHO05D005640 2.6e-47 193.0 162 64.8
TPR.G31410 Trifolium pratense HOM05D004585 ORTHO05D005640 4.4e-47 192.2 150 67.3
DCAR_001331 Daucus carota HOM05D004585 ORTHO05D005640 2.1e-41 173.3 145 62.1
AUR62018007 Chenopodium quinoa HOM05D004585 ORTHO05D005640 1.8e-40 170.2 125 65.6
Aqoxy1G00240 Aquilegia oxysepala HOM05D004585 ORTHO05D005640 4.0e-40 169.1 106 75.5
AagrBONN_evm.TU.Sc2ySwM_228.827 Anthoceros agrestis HOM05D004585 ORTHO05D005640 8.8e-40 167.9 142 55.6
Lj6g0027575 Lotus japonicus HOM05D004585 ORTHO05D005640 8.8e-40 167.9 117 73.5
SMO117G0347 Selaginella moellendorffii HOM05D004585 ORTHO05D005640 1.7e-38 163.7 206 44.2
CBR_g11154 Chara braunii HOM05D004585 ORTHO05D005640 1.8e-37 160.2 227 42.3
MCO05G308 Micromonas commoda HOM05D004585 ORTHO05D005640 5.0e-35 152.1 148 45.3
PRCOL_00003387 Prasinoderma coloniale HOM05D004585 ORTHO05D005640 1.8e-32 143.7 149 45.0
Cre08.g368500 Chlamydomonas reinhardtii HOM05D004585 ORTHO05D005640 3.0e-32 142.9 180 38.9
Cfa021710 Carpinus fangiana HOM05D004585 ORTHO05D005640 1.7e-27 127.1 221 37.6
unitig_26.g9455 Utricularia gibba HOM05D004585 ORTHO05D005640 1.9e-26 123.6 221 40.3
BcaC06g32170 Brassica carinata HOM05D004585 ORTHO05D005640 2.2e-22 110.2 77 63.6
Haze_26093 Corylus avellana HOM05D004585 ORTHO05D005640 1.1e-21 107.8 147 38.1
TPR.G32073 Trifolium pratense HOM05D004585 ORTHO05D005640 4.1e-21 105.9 75 64.0
COL.COLO4_14104 Corchorus olitorius HOM05D004585 ORTHO05D005736 1.1e-18 97.8 75 62.7
COL.COLO4_17533 Corchorus olitorius HOM05D001240 ORTHO05D002450 2.1e-17 93.6 75 60.0
EL10Ac7g17659 Beta vulgaris HOM05D004585 ORTHO05D005640 4.0e-16 89.4 69 58.0
Oeu060262.1 Olea europaea HOM05D004585 ORTHO05D005640 4.0e-16 89.4 102 52.0
MD15G1437000 Malus domestica HOM05D004585 ORTHO05D005640 2.6e-15 86.7 49 79.6
MD15G1436900 Malus domestica HOM05D004585 ORTHO05D005640 5.8e-15 85.5 73 58.9
Oeu053518.1 Olea europaea HOM05D004585 ORTHO05D005640 2.9e-14 83.2 49 73.5
BcaB01g05909 Brassica carinata HOM05D004585 ORTHO05D005640 3.7e-14 82.8 55 67.3
MD15G1437100 Malus domestica HOM05D004585 ORTHO05D005640 2.3e-11 73.6 72 54.2
EL10Ac2g02998 Beta vulgaris HOM05D000461 ORTHO05D005640 3.3e-10 69.7 56 60.7
PSO478G2622 Papaver somniferum HOM05D004585 ORTHO05D037280 5.6e-10 68.9 33 93.9
SalBow3G2087 Salvia bowleyana HOM05D004585 ORTHO05D005640 2.1e-09 67.0 41 73.2
vmacro07224 Vaccinium macrocarpon HOM05D004585 ORTHO05D037280 2.8e-09 66.6 44 68.2
PSO447G0101 Papaver somniferum HOM05D004585 ORTHO05D037280 3.6e-09 66.2 33 90.9
PSO063G7338 Papaver somniferum HOM05D004585 ORTHO05D302184 5.2e-08 62.4 127 37.8
DCAR_009360 Daucus carota HOM05D003145 ORTHO05D003586 2.6e-07 60.1 86 33.7
Glyma.09G232800 Glycine max HOM05D004585 ORTHO05D005640 2.6e-07 60.1 83 48.2
Rhsim03G0179900 Rhododendron simsii HOM05D003145 ORTHO05D003586 7.6e-07 58.5 85 35.3
Lj1P996T49 Lonicera japonica HOM05D003145 ORTHO05D003586 2.2e-06 57.0 88 31.8
FAN15G1856 Fragaria x ananassa HOM05D001495 ORTHO05D001391 4.9e-06 55.8 108 33.3
Oeu024228.1 Olea europaea HOM05D003145 ORTHO05D003586 4.9e-06 55.8 99 30.3
AUR62006166 Chenopodium quinoa HOM05D000604 ORTHO05D004856 8.4e-06 55.1 101 31.7
AUR62026050 Chenopodium quinoa HOM05D000604 ORTHO05D004856 8.4e-06 55.1 101 31.7
FAN20G2774 Fragaria x ananassa HOM05D001495 ORTHO05D001391 8.4e-06 55.1 108 32.4
Lsat_1_v5_gn_8_8220 Lactuca sativa HOM05D001543 ORTHO05D001722 8.4e-06 55.1 54 46.3


User provided reference genes

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