Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 2.2e-149 532.7 375 100.0
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 3.7e-144 515.4 375 89.1
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 3.4e-113 412.5 297 86.5
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 2.1e-75 287.0 383 49.6
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 8.2e-75 285.0 339 61.1
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 1.6e-67 260.8 289 58.1
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 4.8e-67 259.2 289 56.4
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.1e-66 256.5 378 45.2
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 5.3e-66 255.8 290 61.7
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 5.3e-66 255.8 290 61.7
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 4.5e-65 252.7 295 61.7
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 5.0e-64 249.2 285 59.6
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 8.5e-64 248.4 388 51.0
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.1e-63 248.1 285 60.4
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 3.2e-63 246.5 301 55.8
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 3.2e-63 246.5 282 53.2
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 9.4e-63 245.0 297 52.9
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 1.2e-62 244.6 276 62.0
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 1.6e-62 244.2 381 49.6
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.6e-62 244.2 284 53.5
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 3.6e-62 243.0 290 56.2
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 6.1e-62 242.3 375 50.9
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 1.0e-61 241.5 283 49.1
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.0e-61 241.5 293 58.7
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 1.4e-61 241.1 278 56.1
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.8e-61 240.7 286 57.3
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 5.1e-61 239.2 277 55.6
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.0e-60 237.3 377 48.0
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 3.3e-60 236.5 292 60.3
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 5.7e-60 235.7 293 56.3
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 5.7e-60 235.7 285 51.9
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 7.4e-60 235.3 278 52.9
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 9.7e-60 235.0 281 53.7
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 9.7e-60 235.0 283 61.8
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 1.3e-59 234.6 297 53.2
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 1.3e-59 234.6 301 55.8
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 1.3e-59 234.6 286 61.5
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 3.7e-59 233.0 295 54.6
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 3.1e-58 229.9 304 46.7
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.1e-58 229.9 311 53.7
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.1e-58 229.9 374 50.5
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.1e-58 229.9 283 51.9
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 4.1e-58 229.6 289 47.8
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 5.3e-58 229.2 292 47.9
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 5.3e-58 229.2 372 53.0
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 9.1e-58 228.4 306 53.9
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 9.1e-58 228.4 279 49.1
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 9.1e-58 228.4 271 54.6
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 1.2e-57 228.0 379 51.2
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.5e-57 227.6 280 48.6
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 3.4e-57 226.5 288 53.1
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 5.9e-57 225.7 294 53.7
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.0e-56 224.9 286 47.2
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 1.7e-56 224.2 310 54.2
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 1.7e-56 224.2 306 53.6
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 6.5e-56 222.2 377 45.9
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 1.4e-55 221.1 278 53.2
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.9e-55 220.7 294 50.3
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.9e-55 220.7 279 58.1
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 3.2e-55 219.9 287 47.0
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 4.2e-55 219.5 282 53.2
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 2.7e-54 216.9 287 57.8
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 6.1e-54 215.7 279 47.3
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 7.9e-54 215.3 371 54.2
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.4e-53 214.5 296 48.3
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 3.0e-53 213.4 278 52.9
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 3.9e-53 213.0 287 54.0
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 3.9e-53 213.0 267 56.6
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 3.9e-53 213.0 276 54.0
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 3.9e-53 213.0 295 45.8
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 5.1e-53 212.6 284 50.4
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 5.1e-53 212.6 269 61.7
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 1.1e-52 211.5 284 54.2
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 2.0e-52 210.7 269 59.1
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 2.6e-52 210.3 283 47.0
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 2.6e-52 210.3 283 52.7
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 3.3e-52 209.9 283 48.8
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 5.7e-52 209.1 279 54.1
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 5.7e-52 209.1 269 58.7
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 7.4e-52 208.8 275 57.8
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 9.7e-52 208.4 286 46.9
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 9.7e-52 208.4 276 53.3
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 2.2e-51 207.2 285 48.8
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 1.4e-50 204.5 280 45.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 1.8e-50 204.1 283 45.2
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 3.1e-50 203.4 269 57.6
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.3e-50 202.6 254 61.0
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 5.9e-49 199.1 184 55.4
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 7.7e-49 198.7 328 43.3
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.3e-48 198.0 183 64.5
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 8.5e-48 195.3 282 44.3
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 2.5e-47 193.7 302 41.7
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.2e-46 191.4 281 44.8
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 1.0e-45 188.3 246 49.6
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.1e-42 178.3 172 58.7
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 7.0e-42 175.6 178 56.2
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 9.1e-42 175.3 163 60.7
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 1.6e-41 174.5 245 53.9
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 5.9e-41 172.6 274 48.9
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 1.7e-40 171.0 246 53.3
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 4.7e-38 162.9 163 58.3
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 6.1e-30 136.0 92 71.7
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 5.7e-28 129.4 284 40.8
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 2.3e-24 117.5 299 32.4
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 5.0e-24 116.3 267 36.0
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 2.9e-16 90.5 123 45.5
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 2.5e-15 87.4 88 52.3
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 5.2e-13 79.7 46 78.3
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 3.4e-12 77.0 259 29.7
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 2.2e-11 74.3 45 71.1
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 8.3e-11 72.4 141 47.5
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 6.0e-09 66.2 204 32.4
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 1.0e-08 65.5 136 35.3
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.3e-08 65.1 54 50.0
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 2.8e-06 57.4 116 58.6


User provided reference genes

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