Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6051 Papaver somniferum HOM05D003539 ORTHO05D004111 0.0e+00 1204.1 609 100.0
PSO017G0405 Papaver somniferum HOM05D003539 ORTHO05D004111 0.0e+00 1135.6 613 93.6
Nn5g28137 Nelumbo nucifera HOM05D003539 ORTHO05D004111 1.2e-181 640.6 640 55.2
TAR381G1444 Trochodendron aralioides HOM05D003539 ORTHO05D004111 8.1e-181 637.9 633 54.7
GSVIVG01026448001 Vitis vinifera HOM05D003539 ORTHO05D004111 3.8e-170 602.4 618 52.1
Dinv40214 Davidia involucrata HOM05D003539 ORTHO05D004111 1.6e-168 597.0 634 50.6
Hma1.2p1_0085F.1_g044410 Hydrangea macrophylla HOM05D003539 ORTHO05D004111 4.3e-166 589.0 643 49.6
Manes.01G157300 Manihot esculenta HOM05D003539 ORTHO05D004111 1.2e-163 580.9 644 50.6
CSS0035723 Camellia sinensis var. sinensis HOM05D003539 ORTHO05D004111 5.8e-163 578.6 642 50.0
Dinv28297 Davidia involucrata HOM05D003539 ORTHO05D004111 7.6e-163 578.2 636 50.0
Sc06g0005250 Simmondsia chinensis HOM05D003539 ORTHO05D004111 1.3e-162 577.4 646 48.6
Eucgr.J02557 Eucalyptus grandis HOM05D003539 ORTHO05D004111 2.1e-160 570.1 644 48.9
CANSAT35G0647 Cannabis sativa HOM05D003539 ORTHO05D004111 4.6e-160 568.9 622 50.5
Atru.chr3.55 Acer truncatum HOM05D003539 ORTHO05D004111 1.5e-158 563.9 639 49.5
QL06p053198 Quercus lobata HOM05D003539 ORTHO05D004111 2.5e-158 563.1 615 51.4
vmacro18474 Vaccinium macrocarpon HOM05D003539 ORTHO05D004111 2.5e-158 563.1 653 49.6
Glyma.09G196200 Glycine max HOM05D003539 ORTHO05D004111 3.3e-158 562.8 644 50.3
TWI79G1391 Tripterygium wilfordii HOM05D003539 ORTHO05D004111 1.6e-157 560.5 642 48.0
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.6e-157 560.5 561 54.9
Glyma.16G112800 Glycine max HOM05D003539 ORTHO05D004111 1.1e-156 557.8 638 48.6
Gohir.D03G066500 Gossypium hirsutum HOM05D003539 ORTHO05D004111 1.4e-156 557.4 641 49.1
Gorai.003G064600 Gossypium raimondii HOM05D003539 ORTHO05D004111 5.3e-156 555.4 641 49.0
MBI04_g31205_MAGBIO Magnolia biondii HOM05D003539 ORTHO05D004111 2.2e-154 550.1 615 50.2
Cfa007110 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.9e-154 549.7 622 50.6
Aqoxy6G01535 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 4.9e-154 548.9 650 48.6
CiPaw.15G173100 Carya illinoinensis HOM05D003539 ORTHO05D004111 4.9e-154 548.9 601 50.9
Phvul.010G020100 Phaseolus vulgaris HOM05D003539 ORTHO05D004111 4.9e-154 548.9 616 49.0
Oeu063413.2 Olea europaea HOM05D003539 ORTHO05D004111 1.1e-153 547.7 632 48.9
Haze_03640 Corylus avellana HOM05D003539 ORTHO05D004111 1.4e-153 547.4 622 50.2
Oeu010807.1 Olea europaea HOM05D003539 ORTHO05D004111 1.4e-153 547.4 637 48.2
PGR044G1248 Punica granatum HOM05D003539 ORTHO05D004111 2.4e-153 546.6 641 47.0
ClCG02G000270 Citrullus lanatus HOM05D003539 ORTHO05D004111 5.4e-153 545.4 656 46.0
Sed0003470 Sechium edule HOM05D003539 ORTHO05D004111 5.4e-153 545.4 626 47.1
Lalb_Chr09g0334501 Lupinus albus HOM05D003539 ORTHO05D004111 3.5e-152 542.7 626 49.0
Thecc.01G002200 Theobroma cacao HOM05D003539 ORTHO05D004111 5.1e-151 538.9 639 47.9
Cc07_g12170 Coffea canephora HOM05D003539 ORTHO05D004111 6.7e-151 538.5 649 47.6
VMungo1309G1473 Vigna mungo HOM05D003539 ORTHO05D004111 8.7e-151 538.1 613 49.6
Prupe.7G186400 Prunus persica HOM05D003539 ORTHO05D004111 1.1e-150 537.7 632 47.2
Lalb_Chr05g0229501 Lupinus albus HOM05D003539 ORTHO05D004111 4.3e-150 535.8 625 47.8
MD02G1108900 Malus domestica HOM05D003539 ORTHO05D004111 1.3e-149 534.3 643 48.1
arahy.Tifrunner.gnm1.ann1.PPI4NM Arachis hypogaea HOM05D003539 ORTHO05D004111 1.4e-148 530.8 692 44.8
arahy.Tifrunner.gnm1.ann1.4LH58N Arachis hypogaea HOM05D003539 ORTHO05D004111 4.0e-148 529.3 715 43.5
Aqoxy3G00418 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 1.2e-147 527.7 645 48.2
Potri.005G098500 Populus trichocarpa HOM05D003539 ORTHO05D004111 1.2e-147 527.7 643 46.5
HanXRQChr16g0510861 Helianthus annuus HOM05D003539 ORTHO05D004111 2.6e-147 526.6 605 48.4
Lsat_1_v5_gn_5_30740 Lactuca sativa HOM05D003539 ORTHO05D004111 1.3e-146 524.2 626 46.6
Manes.11G091200 Manihot esculenta HOM05D003539 ORTHO05D004111 1.3e-146 524.2 646 47.5
Lj4g0013403 Lotus japonicus HOM05D003539 ORTHO05D004111 1.7e-146 523.9 632 48.3
Rhsim08G0026200 Rhododendron simsii HOM05D003539 ORTHO05D004111 2.9e-146 523.1 660 47.4
arahy.Tifrunner.gnm1.ann1.VZS2MK Arachis hypogaea HOM05D003539 ORTHO05D004111 3.2e-145 519.6 727 42.4
THA.LOC104814350 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 4.2e-145 519.2 628 46.8
Nitab4.5_0000855g0080 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.2e-144 517.7 632 47.3
MSTRG.20424 Avicennia marina HOM05D003539 ORTHO05D004111 2.7e-144 516.5 633 45.3
Lj2C504G7 Lonicera japonica HOM05D003539 ORTHO05D004111 2.7e-144 516.5 537 50.1
Sed0013779 Sechium edule HOM05D003539 ORTHO05D004111 2.7e-144 516.5 539 50.1
Sabra05G0080900 Salix brachista HOM05D003539 ORTHO05D004111 3.5e-144 516.2 615 46.8
COL.COLO4_16224 Corchorus olitorius HOM05D003539 ORTHO05D004111 6.0e-144 515.4 617 47.6
ECA233G1070 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-144 515.4 611 46.8
arahy.Tifrunner.gnm1.ann1.UQ0JCX Arachis hypogaea HOM05D003539 ORTHO05D004111 7.9e-144 515.0 721 42.4
Nitab4.5_0000588g0180 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.3e-143 514.2 632 47.6
EL10Ac4g09711 Beta vulgaris HOM05D003539 ORTHO05D004111 3.0e-143 513.1 644 46.0
Ca_21575_v3 Cicer arietinum L. HOM05D003539 ORTHO05D004111 3.0e-143 513.1 606 47.7
AL4G30740 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 5.1e-143 512.3 612 47.1
Migut.A00468 Erythranthe guttata HOM05D003539 ORTHO05D004111 3.3e-142 509.6 633 44.7
Nitab4.5_0003096g0020 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.3e-141 507.7 613 48.0
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 3.7e-141 506.1 564 48.8
Carub.0004s1644 Capsella rubella HOM05D003539 ORTHO05D004111 1.4e-140 504.2 616 47.6
ClCG05G001500 Citrullus lanatus HOM05D003539 ORTHO05D004111 6.9e-140 501.9 655 43.4
SGA_v2.0_scaffold36G14401 Striga asiatica HOM05D003539 ORTHO05D004111 1.2e-139 501.1 629 45.5
Hund21770 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.5e-139 500.7 646 45.2
Aa31LG10G6570 Aethionema arabicum HOM05D003539 ORTHO05D004111 2.0e-139 500.4 630 46.2
Aqoxy3G00897 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 5.8e-139 498.8 590 49.3
CAN.G1428.5 Capsicum annuum HOM05D003539 ORTHO05D004111 7.6e-139 498.4 638 45.6
SGA_v2.0_scaffold172G38971 Striga asiatica HOM05D003539 ORTHO05D004111 3.2e-137 493.0 691 43.0
Medtr4g117680 Medicago truncatula HOM05D003539 ORTHO05D004111 2.7e-136 490.0 641 45.1
arahy.Tifrunner.gnm1.ann1.JIK3X3 Arachis hypogaea HOM05D003539 ORTHO05D004111 6.0e-136 488.8 702 41.6
Sp4g17040 Schrenkiella parvula HOM05D003539 ORTHO05D004111 6.0e-136 488.8 604 45.7
Aa31LG6G11830 Aethionema arabicum HOM05D003539 ORTHO05D004111 1.3e-135 487.6 624 46.3
Solyc02g082340.3 Solanum lycopersicum HOM05D003539 ORTHO05D004111 1.8e-135 487.3 618 46.0
AT2G34750 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 1.1e-134 484.6 612 45.4
Thhalv10007103m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 1.5e-134 484.2 604 47.2
Sopen02g027000 Solanum pennellii HOM05D003539 ORTHO05D004111 1.9e-134 483.8 618 45.5
Thhalv10016395m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 5.7e-134 482.3 609 45.3
Psat3g044960 Pisum sativum HOM05D003539 ORTHO05D004111 5.7e-134 482.3 616 46.8
FAN28G2151 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.6e-133 480.7 643 44.3
FvH4_1g10010 Fragaria vesca HOM05D003539 ORTHO05D004111 2.1e-133 480.3 643 44.3
RcHm_v2.0_Chr2g0096801 Rosa chinensis HOM05D003539 ORTHO05D004111 2.1e-133 480.3 642 44.4
MELO3C006107.2 Cucumis melo HOM05D003539 ORTHO05D004111 4.8e-133 479.2 539 47.3
FAN26G1725 Fragaria x ananassa HOM05D003539 ORTHO05D004111 6.3e-133 478.8 643 44.3
BcaB06g28796 Brassica carinata HOM05D003539 ORTHO05D004111 1.1e-132 478.0 617 44.7
Carub.0001s2885 Capsella rubella HOM05D003539 ORTHO05D004111 1.8e-132 477.2 596 47.0
TPR.G29658 Trifolium pratense HOM05D003539 ORTHO05D004111 1.8e-132 477.2 632 45.3
CARHR128910 Cardamine hirsuta HOM05D003539 ORTHO05D004111 1.5e-131 474.2 609 46.0
HanXRQChr09g0270331 Helianthus annuus HOM05D003539 ORTHO05D004111 4.5e-131 472.6 543 46.8
FAN19G1026 Fragaria x ananassa HOM05D003539 ORTHO05D004111 5.9e-131 472.2 654 43.6
Psat7g042440 Pisum sativum HOM05D003539 ORTHO05D004111 5.9e-131 472.2 649 44.2
Sc09g0001980 Simmondsia chinensis HOM05D003539 ORTHO05D004111 1.3e-130 471.1 520 48.8
Peaxi162Scf00677g00114 Petunia axillaris HOM05D003539 ORTHO05D004111 1.1e-129 468.0 633 44.5
SEGI_33601 Sequoiadendron giganteum HOM05D003539 ORTHO05D004111 1.9e-129 467.2 626 43.8
Cfa016374 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.5e-129 466.8 562 47.0
Haze_00123 Corylus avellana HOM05D003539 ORTHO05D004111 2.5e-129 466.8 602 45.8
FAN23G2523 Fragaria x ananassa HOM05D003539 ORTHO05D004111 2.5e-129 466.8 662 42.9
Ah.06g188300 Amaranthus hybridus HOM05D003539 ORTHO05D004111 4.2e-129 466.1 641 43.2
A04p26550 Brassica napus HOM05D003539 ORTHO05D004111 5.5e-129 465.7 627 44.7
CDE07G0217 Ceratophyllum demersum HOM05D003539 ORTHO05D004111 2.1e-128 463.8 547 47.2
AUR62006940 Chenopodium quinoa HOM05D003539 ORTHO05D004111 3.6e-128 463.0 622 44.4
BolC3t14644H Brassica oleracea HOM05D003539 ORTHO05D004111 4.6e-128 462.6 617 44.1
BraA04t18159Z Brassica rapa HOM05D003539 ORTHO05D004111 4.6e-128 462.6 643 43.5
AL1G44630 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 6.1e-128 462.2 608 45.7
C03p22480 Brassica napus HOM05D003539 ORTHO05D004111 6.1e-128 462.2 617 43.8
A03p19290 Brassica napus HOM05D003539 ORTHO05D004111 5.1e-127 459.1 622 43.6
BraA03t11183Z Brassica rapa HOM05D003539 ORTHO05D004111 6.7e-127 458.8 622 43.6
Hund28202 Selenicereus undatus HOM05D003539 ORTHO05D004111 7.4e-126 455.3 672 41.2
Hund28214 Selenicereus undatus HOM05D003539 ORTHO05D004111 7.4e-126 455.3 672 41.2
unitig_699.g19839 Utricularia gibba HOM05D003539 ORTHO05D004111 1.4e-124 451.1 598 43.5
Os06g0688100 Oryza sativa ssp. japonica HOM05D003539 ORTHO05D004111 5.3e-124 449.1 637 41.6
THA.LOC104798595 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 3.2e-121 439.9 565 44.6
Actinidia28753 Actinidia chinensis HOM05D003539 ORTHO05D004111 7.2e-121 438.7 621 42.8
AT1G30590 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 2.1e-120 437.2 602 45.2
Duzib147G0916 Durio zibethinus HOM05D003539 ORTHO05D004111 5.1e-119 432.6 620 43.1
Peaxi162Scf00344g01722 Petunia axillaris HOM05D003539 ORTHO05D004111 4.4e-118 429.5 659 41.4
Gohir.A02G120000 Gossypium hirsutum HOM05D003539 ORTHO05D004111 3.4e-115 419.9 457 51.0
ATR0605G358 Amborella trichopoda HOM05D003539 ORTHO05D004111 3.2e-113 413.3 567 42.0
AUR62000583 Chenopodium quinoa HOM05D003539 ORTHO05D004111 1.2e-112 411.4 621 40.9
BraA05t20035Z Brassica rapa HOM05D003539 ORTHO05D004111 1.4e-111 407.9 604 41.7
Pp3c18_6750 Physcomitrium patens HOM05D003539 ORTHO05D004111 1.5e-110 404.4 601 38.8
Pp3c18_6751 Physcomitrium patens HOM05D003539 ORTHO05D004111 1.5e-110 404.4 601 38.8
Peaxi162Scf00015g00939 Petunia axillaris HOM05D003539 ORTHO05D004111 4.4e-110 402.9 631 41.4
BolC4t22991H Brassica oleracea HOM05D003539 ORTHO05D004111 9.7e-110 401.7 610 41.5
Pp3c21_14490 Physcomitrium patens HOM05D003539 ORTHO05D004111 3.1e-108 396.7 623 37.4
Zm00001eb226160 Zea mays HOM05D003539 ORTHO05D004111 5.3e-108 396.0 593 42.0
C04p14010 Brassica napus HOM05D003539 ORTHO05D004111 7.0e-108 395.6 610 41.1
BcaC06g35972 Brassica carinata HOM05D003539 ORTHO05D004111 2.0e-107 394.0 605 42.5
AL4G35010 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 7.7e-107 392.1 603 42.3
C07p01640 Brassica napus HOM05D003539 ORTHO05D004111 8.5e-106 388.7 575 43.5
Mapoly0144s0013 Marchantia polymorpha HOM05D003539 ORTHO05D004111 2.1e-104 384.0 612 38.2
Carub.0004s2129 Capsella rubella HOM05D003539 ORTHO05D004111 4.7e-104 382.9 603 41.3
AT2G39240 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 4.4e-102 376.3 619 41.2
SMO356G0429 Selaginella moellendorffii HOM05D003539 ORTHO05D004111 5.9e-99 365.9 616 36.9
BcaC02g11551 Brassica carinata HOM05D003539 ORTHO05D004111 4.8e-93 346.3 612 39.1
C04p63970 Brassica napus HOM05D003539 ORTHO05D004111 4.5e-83 313.2 455 41.8
AL4G36550 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 2.9e-82 310.5 585 38.3
AagrBONN_evm.TU.Sc2ySwM_368.2744 Anthoceros agrestis HOM05D003539 ORTHO05D004111 5.0e-82 309.7 556 35.1
SalBow7G2073 Salvia bowleyana HOM05D003539 ORTHO05D004111 8.0e-80 302.4 363 47.7
C07p01430 Brassica napus HOM05D003539 ORTHO05D004111 1.8e-79 301.2 443 43.1
HPP92_018392 Vanilla planifolia HOM05D003539 ORTHO05D004111 3.0e-79 300.4 441 39.2
BcaC01g05764 Brassica carinata HOM05D003539 ORTHO05D004111 1.2e-78 298.5 406 42.1
Actinidia20762 Actinidia chinensis HOM05D003539 ORTHO05D004111 4.7e-72 276.6 296 51.0
FAN23G0637 Fragaria x ananassa HOM05D003539 ORTHO05D004111 8.9e-71 272.3 384 43.5
Actinidia02872 Actinidia chinensis HOM05D003539 ORTHO05D004111 3.4e-70 270.4 330 45.8
Actinidia20763 Actinidia chinensis HOM05D003539 ORTHO05D004111 2.3e-66 257.7 347 45.0
PSO782G3432 Papaver somniferum HOM05D003539 ORTHO05D004111 2.3e-63 247.7 315 49.2
DCAR_007550 Daucus carota HOM05D003539 ORTHO05D004111 4.7e-56 223.4 259 47.9
BolC4t27866H Brassica oleracea HOM05D003539 ORTHO05D004111 2.6e-54 217.6 265 47.9
Oeu000297.1 Olea europaea HOM05D003539 ORTHO05D004111 5.8e-54 216.5 247 48.6
BcaC06g35980 Brassica carinata HOM05D003539 ORTHO05D004111 2.2e-53 214.5 261 47.5
SHI13961 Sapria himalayana HOM05D003539 ORTHO05D004111 3.5e-51 207.2 354 40.7
SalBow7G0297 Salvia bowleyana HOM05D003539 ORTHO05D004111 6.0e-51 206.5 258 45.0
Cre03.g207950 Chlamydomonas reinhardtii HOM05D003539 ORTHO05D004111 2.1e-48 198.0 624 25.6
BcaB05g23816 Brassica carinata HOM05D003539 ORTHO05D004111 3.0e-42 177.6 324 39.2
DCAR_007549 Daucus carota HOM05D003539 ORTHO05D004111 4.0e-39 167.2 193 47.7
Ciclev10010838m.g Citrus clementina HOM05D003539 ORTHO05D004111 5.3e-39 166.8 186 50.0
GSVIVG01026439001 Vitis vinifera HOM05D003539 ORTHO05D004111 2.9e-37 161.0 163 49.1
PRCOL_00004831 Prasinoderma coloniale HOM05D003539 ORTHO05D004111 5.4e-36 156.8 475 27.4
Gohir.A02G119802 Gossypium hirsutum HOM05D003539 ORTHO05D004111 4.5e-30 137.1 174 45.4
CBR_g23271 Chara braunii HOM05D003539 ORTHO05D004111 2.9e-29 134.4 361 29.4
CBR_g23267 Chara braunii HOM05D000019 ORTHO05D000048 8.4e-29 132.9 188 38.3
Cfa022324 Carpinus fangiana HOM05D003539 ORTHO05D004111 9.3e-28 129.4 617 22.9
MCO15G598 Micromonas commoda HOM05D003539 ORTHO05D004111 9.3e-28 129.4 637 23.5
RcHm_v2.0_Chr2g0096841 Rosa chinensis HOM05D003539 ORTHO05D004111 1.6e-27 128.6 201 40.8
arahy.Tifrunner.gnm1.ann1.PJLZ8M Arachis hypogaea HOM05D003539 ORTHO05D004111 2.1e-27 128.3 151 47.7
BcaC06g35981 Brassica carinata HOM05D003539 ORTHO05D004111 2.4e-23 114.8 190 40.0
EL10Ac6g14558 Beta vulgaris HOM05D003539 ORTHO05D004111 1.6e-19 102.1 109 50.5
Cfa022001 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.1e-19 101.7 138 40.6
Cpa.g.sc7.212 Carica papaya HOM05D003539 ORTHO05D004111 6.0e-19 100.1 176 38.1
HanXRQChr05g0145981 Helianthus annuus HOM05D003539 ORTHO05D004111 4.3e-17 94.0 175 33.7
Cpa.g.sc7.213 Carica papaya HOM05D003539 ORTHO05D004111 4.8e-16 90.5 78 50.0
Medtr8g085920 Medicago truncatula HOM05D003539 ORTHO05D004111 3.0e-10 71.2 78 53.8
C03p59690 Brassica napus HOM05D003539 ORTHO05D004111 6.7e-10 70.1 112 37.5
BolC3t18231H Brassica oleracea HOM05D003539 ORTHO05D004111 6.7e-10 70.1 112 37.5
Potri.007G065101 Populus trichocarpa HOM05D003539 ORTHO05D004111 2.4e-07 61.6 131 37.4
Medtr4g117730 Medicago truncatula HOM05D003539 ORTHO05D004111 9.1e-07 59.7 59 52.5
Psat0s4462g0080 Pisum sativum HOM05D003539 ORTHO05D004111 4.5e-06 57.4 63 50.8


User provided reference genes

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