Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5913 Papaver somniferum HOM05D041942 ORTHO05D002441 4.9e-165 584.3 285 100.0
PSO339G6139 Papaver somniferum HOM05D041942 ORTHO05D002441 3.0e-154 548.5 265 99.6
PSO170G6601 Papaver somniferum HOM05D041942 ORTHO05D302896 6.4e-96 354.8 166 100.0
PSO170G0827 Papaver somniferum HOM05D002230 ORTHO05D002441 1.7e-48 197.2 101 100.0
PSO725G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 4.2e-47 192.6 98 100.0
PSO173G0158 Papaver somniferum HOM05D002230 ORTHO05D002441 7.4e-28 128.6 150 50.7
PSO173G0025 Papaver somniferum HOM05D002230 ORTHO05D002441 1.8e-26 124.0 150 49.3
PSO673G0035 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-26 122.5 150 48.7
PSO017G6172 Papaver somniferum HOM05D002230 ORTHO05D002441 8.8e-21 105.1 152 45.4
PSO170G2940 Papaver somniferum HOM05D002230 ORTHO05D002441 1.1e-20 104.8 134 48.5
PSO541G3522 Papaver somniferum HOM05D002230 ORTHO05D002441 1.1e-20 104.8 159 47.8
PSO455G0070 Papaver somniferum HOM05D002230 ORTHO05D002441 5.7e-20 102.4 128 47.7
PSO421G0252 Papaver somniferum HOM05D002230 ORTHO05D002441 7.4e-20 102.1 154 43.5
PSO541G3453 Papaver somniferum HOM05D002230 ORTHO05D002441 4.8e-19 99.4 155 43.9
THA.LOC104815521 Tarenaya hassleriana HOM05D002230 ORTHO05D002441 1.2e-17 94.7 147 38.1
PSO782G1699 Papaver somniferum HOM05D002230 ORTHO05D002441 2.6e-17 93.6 132 43.2
PSO170G1574 Papaver somniferum HOM05D002230 ORTHO05D002441 3.5e-17 93.2 132 43.2
Thhalv10006612m.g Eutrema salsugineum HOM05D002230 ORTHO05D002441 4.5e-17 92.8 147 38.1
Aa31LG1G7760 Aethionema arabicum HOM05D002230 ORTHO05D002441 1.0e-16 91.7 141 41.1
PSO017G2413 Papaver somniferum HOM05D002230 ORTHO05D002441 1.0e-16 91.7 117 44.4
MELO3C013185.2 Cucumis melo HOM05D002230 ORTHO05D002441 1.7e-16 90.9 133 39.8
CsaV3_7G021630 Cucumis sativus L. HOM05D002230 ORTHO05D002441 1.7e-16 90.9 133 39.8
BraA09t42020Z Brassica rapa HOM05D002230 ORTHO05D002441 2.2e-16 90.5 125 40.8
ClCG09G010650 Citrullus lanatus HOM05D002230 ORTHO05D002441 2.9e-16 90.1 133 39.8
Nn3g21087 Nelumbo nucifera HOM05D002230 ORTHO05D002441 2.9e-16 90.1 132 40.9
unitig_748.g7990 Utricularia gibba HOM05D002230 ORTHO05D002441 2.9e-16 90.1 132 40.2
AT1G06720 Arabidopsis thaliana HOM05D002230 ORTHO05D002441 3.8e-16 89.7 125 40.0
BcaC07g42052 Brassica carinata HOM05D002230 ORTHO05D002441 3.8e-16 89.7 126 40.5
Glyma.11G125100 Glycine max HOM05D002230 ORTHO05D002441 3.8e-16 89.7 133 41.4
Glyma.12G049700 Glycine max HOM05D002230 ORTHO05D002441 3.8e-16 89.7 133 41.4
Manes.09G003400 Manihot esculenta HOM05D002230 ORTHO05D002441 5.0e-16 89.4 132 40.9
QL03p066506 Quercus lobata HOM05D002230 ORTHO05D002441 5.0e-16 89.4 132 40.9
Sc13g0000880 Simmondsia chinensis HOM05D002230 ORTHO05D002441 5.0e-16 89.4 132 40.9
AL1G16730 Arabidopsis lyrata HOM05D002230 ORTHO05D002441 6.5e-16 89.0 125 39.2
Cfa015221 Carpinus fangiana HOM05D002230 ORTHO05D002441 6.5e-16 89.0 132 40.2
Lalb_Chr01g0003061 Lupinus albus HOM05D002230 ORTHO05D002441 6.5e-16 89.0 132 40.9
MD00G1071300 Malus domestica HOM05D002230 ORTHO05D002441 6.5e-16 89.0 132 39.4
VMungo1127G0405 Vigna mungo HOM05D002230 ORTHO05D002441 6.5e-16 89.0 132 41.7
Aqoxy1G01987 Aquilegia oxysepala HOM05D002230 ORTHO05D002441 8.5e-16 88.6 130 41.5
C08p51050 Brassica napus HOM05D002230 ORTHO05D002441 8.5e-16 88.6 125 40.0
BolC8t52632H Brassica oleracea HOM05D002230 ORTHO05D002441 8.5e-16 88.6 125 40.0
CiPaw.01G173300 Carya illinoinensis HOM05D002230 ORTHO05D002441 8.5e-16 88.6 132 40.9
Sed0010811 Sechium edule HOM05D002230 ORTHO05D002441 8.5e-16 88.6 154 36.4
TAR627G1002 Trochodendron aralioides HOM05D002230 ORTHO05D002441 8.5e-16 88.6 132 40.2
CARHR006400 Cardamine hirsuta HOM05D002230 ORTHO05D002441 1.1e-15 88.2 134 40.3
Atru.chr4.1347 Acer truncatum HOM05D002230 ORTHO05D002441 1.5e-15 87.8 132 41.7
Haze_01398 Corylus avellana HOM05D002230 ORTHO05D002441 1.5e-15 87.8 129 40.3
ECA236G3424 Erigeron canadensis HOM05D002230 ORTHO05D002441 1.5e-15 87.8 136 41.9
Gohir.A10G197400 Gossypium hirsutum HOM05D002230 ORTHO05D002441 1.5e-15 87.8 132 40.9
Lalb_Chr19g0138431 Lupinus albus HOM05D002230 ORTHO05D002441 1.5e-15 87.8 132 40.2
MD03G1154000 Malus domestica HOM05D002230 ORTHO05D002441 1.5e-15 87.8 132 38.6
TWI38G2091 Tripterygium wilfordii HOM05D002230 ORTHO05D002441 1.5e-15 87.8 132 40.9
Ciclev10027707m.g Citrus clementina HOM05D002230 ORTHO05D002441 1.9e-15 87.4 130 43.1
Eucgr.A00036 Eucalyptus grandis HOM05D002230 ORTHO05D002441 1.9e-15 87.4 132 40.9
Lj1g0018031 Lotus japonicus HOM05D002230 ORTHO05D002441 1.9e-15 87.4 132 40.2
A09p66820 Brassica napus HOM05D002230 ORTHO05D002441 2.5e-15 87.0 125 39.2
CSS0042856 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 40.2
Gohir.A03G041200 Gossypium hirsutum HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 40.9
Gohir.D10G204500 Gossypium hirsutum HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 40.9
Gorai.003G133300 Gossypium raimondii HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 40.9
Gorai.011G229500 Gossypium raimondii HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 40.9
Lj3g0013974 Lotus japonicus HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 40.2
Thecc.10G116300 Theobroma cacao HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 40.9
GSVIVG01020936001 Vitis vinifera HOM05D002230 ORTHO05D002441 2.5e-15 87.0 132 39.4
CSS0011706 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 3.2e-15 86.7 132 40.2
Carub.0001s0605 Capsella rubella HOM05D002230 ORTHO05D002441 3.2e-15 86.7 125 38.4
Peaxi162Scf00282g00128 Petunia axillaris HOM05D002230 ORTHO05D002441 3.2e-15 86.7 132 40.2
Phvul.011G051900 Phaseolus vulgaris HOM05D002230 ORTHO05D002441 3.2e-15 86.7 132 40.9
Sp1g05450 Schrenkiella parvula HOM05D002230 ORTHO05D002441 3.2e-15 86.7 125 40.0
A10p05300 Brassica napus HOM05D002230 ORTHO05D002441 4.2e-15 86.3 125 40.0
C05p04900 Brassica napus HOM05D002230 ORTHO05D002441 4.2e-15 86.3 125 40.0
BolC5t29262H Brassica oleracea HOM05D002230 ORTHO05D002441 4.2e-15 86.3 125 40.0
BraA10t42795Z Brassica rapa HOM05D002230 ORTHO05D002441 4.2e-15 86.3 125 40.0
Prupe.8G069100 Prunus persica HOM05D002230 ORTHO05D002441 4.2e-15 86.3 132 37.9
RcHm_v2.0_Chr4g0406311 Rosa chinensis HOM05D002230 ORTHO05D002441 4.2e-15 86.3 133 37.6
Ciclev10018567m.g Citrus clementina HOM05D002230 ORTHO05D002441 5.5e-15 85.9 132 41.7
Cc03_g10880 Coffea canephora HOM05D002230 ORTHO05D002441 5.5e-15 85.9 130 39.2
Prupe.1G548200 Prunus persica HOM05D002230 ORTHO05D002441 5.5e-15 85.9 132 37.9
Ca_20807_v3 Cicer arietinum L. HOM05D002230 ORTHO05D002441 7.2e-15 85.5 132 40.2
Dinv36883 Davidia involucrata HOM05D002230 ORTHO05D002441 7.2e-15 85.5 132 38.6
Solyc01g097640.3 Solanum lycopersicum HOM05D002230 ORTHO05D002441 7.2e-15 85.5 132 39.4
Sopen00g003550 Solanum pennellii HOM05D002230 ORTHO05D002441 7.2e-15 85.5 132 39.4
Sopen01g041250 Solanum pennellii HOM05D002230 ORTHO05D002441 7.2e-15 85.5 132 39.4
PGSC0003DMG403019442 Solanum tuberosum HOM05D002230 ORTHO05D002441 7.2e-15 85.5 132 39.4
TPR.G34218 Trifolium pratense HOM05D002230 ORTHO05D002441 7.2e-15 85.5 132 39.4
HanXRQChr14g0454041 Helianthus annuus HOM05D002230 ORTHO05D002441 9.4e-15 85.1 130 40.8
Medtr4g068150 Medicago truncatula HOM05D002230 ORTHO05D002441 9.4e-15 85.1 132 39.4
Nitab4.5_0005729g0040 Nicotiana tabacum HOM05D002230 ORTHO05D002441 9.4e-15 85.1 132 38.6
Nitab4.5_0009733g0020 Nicotiana tabacum HOM05D002230 ORTHO05D002441 9.4e-15 85.1 132 38.6
SHI00660 Sapria himalayana HOM05D002230 ORTHO05D002441 9.4e-15 85.1 124 42.7
arahy.Tifrunner.gnm1.ann1.W5M1I0 Arachis hypogaea HOM05D002230 ORTHO05D002441 1.2e-14 84.7 132 40.2
arahy.Tifrunner.gnm1.ann1.XT66D5 Arachis hypogaea HOM05D002230 ORTHO05D002441 1.2e-14 84.7 132 40.2
Dinv44229 Davidia involucrata HOM05D002230 ORTHO05D002441 1.2e-14 84.7 132 39.4
Duzib114G0665 Durio zibethinus HOM05D002230 ORTHO05D002441 1.2e-14 84.7 132 40.2
Hma1.2p1_0007F.1_g004970 Hydrangea macrophylla HOM05D002230 ORTHO05D002441 1.2e-14 84.7 132 38.6
Potri.017G017700 Populus trichocarpa HOM05D002230 ORTHO05D002441 1.2e-14 84.7 130 40.0
ATR0317G080 Amborella trichopoda HOM05D002230 ORTHO05D002441 1.6e-14 84.3 144 38.2
Cpa.g.sc9.331 Carica papaya HOM05D002230 ORTHO05D002441 1.6e-14 84.3 132 40.2
SGA_v2.0_scaffold172G39053 Striga asiatica HOM05D002230 ORTHO05D002441 1.6e-14 84.3 154 35.7
Psat7g208680 Pisum sativum HOM05D002230 ORTHO05D002441 2.1e-14 84.0 132 38.6
Sed0001302 Sechium edule HOM05D002230 ORTHO05D002441 2.1e-14 84.0 130 37.7
CANSAT54G2648 Cannabis sativa HOM05D002230 ORTHO05D002441 6.1e-14 82.4 132 37.1
CAN.G134.124 Capsicum annuum HOM05D002230 ORTHO05D002441 6.1e-14 82.4 132 37.9
Lsat_1_v5_gn_6_31421 Lactuca sativa HOM05D002230 ORTHO05D002441 6.1e-14 82.4 130 39.2
RcHm_v2.0_Chr5g0051051 Rosa chinensis HOM05D002230 ORTHO05D002441 6.1e-14 82.4 133 36.8
vmacro16180 Vaccinium macrocarpon HOM05D002230 ORTHO05D002441 6.1e-14 82.4 134 35.8
Ciclev10027721m.g Citrus clementina HOM05D002230 ORTHO05D002441 8.0e-14 82.0 132 40.2
SalBow4G2246 Salvia bowleyana HOM05D002230 ORTHO05D002441 8.0e-14 82.0 132 36.4
SHI22050 Sapria himalayana HOM05D002230 ORTHO05D002441 8.0e-14 82.0 126 42.1
HPP92_015122 Vanilla planifolia HOM05D002230 ORTHO05D002441 8.0e-14 82.0 132 37.1
FvH4_4g10660 Fragaria vesca HOM05D002230 ORTHO05D002441 1.4e-13 81.3 132 36.4
FAN07G1373 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.4e-13 81.3 132 36.4
FAN12G3082 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.4e-13 81.3 132 36.4
FAN12G3273 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.4e-13 81.3 132 36.4
FAN17G0610 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.8e-13 80.9 132 36.4
Lj1A1071T61 Lonicera japonica HOM05D002230 ORTHO05D002441 2.3e-13 80.5 130 38.5
PSO339G1305 Papaver somniferum HOM05D002230 ORTHO05D002441 2.3e-13 80.5 114 42.1
BcaC05g24645 Brassica carinata HOM05D002230 ORTHO05D002441 4.0e-13 79.7 132 37.9
Ah.04g150630 Amaranthus hybridus HOM05D002230 ORTHO05D002441 8.8e-13 78.6 133 36.1
ECA233G0320 Erigeron canadensis HOM05D002230 ORTHO05D002441 8.8e-13 78.6 129 39.5
PSO332G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 8.8e-13 78.6 114 42.1
PSO421G0346 Papaver somniferum HOM05D002230 ORTHO05D002441 8.8e-13 78.6 114 42.1
EL10Ac3g07289 Beta vulgaris HOM05D002230 ORTHO05D002441 1.2e-12 78.2 133 33.8
Hund16448 Selenicereus undatus HOM05D002230 ORTHO05D002441 1.2e-12 78.2 132 36.4
AUR62021045 Chenopodium quinoa HOM05D002230 ORTHO05D002441 2.0e-12 77.4 132 36.4
PSO264G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 2.0e-12 77.4 114 41.2
PSO673G0034 Papaver somniferum HOM05D002230 ORTHO05D002441 2.0e-12 77.4 114 41.2
Os03g0333100 Oryza sativa ssp. japonica HOM05D002230 ORTHO05D002441 2.6e-12 77.0 131 38.2
Zm00001eb015920 Zea mays HOM05D002230 ORTHO05D002441 3.4e-12 76.6 131 38.2
DCAR_027245 Daucus carota HOM05D002230 ORTHO05D002441 5.7e-12 75.9 129 38.0
SEGI_31495 Sequoiadendron giganteum HOM05D002230 ORTHO05D002441 5.7e-12 75.9 122 36.9
Migut.A00192 Erythranthe guttata HOM05D002230 ORTHO05D002441 7.5e-12 75.5 130 35.4
MBI04_g09487_MAGBIO Magnolia biondii HOM05D002230 ORTHO05D002441 7.5e-12 75.5 132 34.1
CDE06G0512 Ceratophyllum demersum HOM05D002230 ORTHO05D002441 1.3e-11 74.7 133 34.6
Pp3c13_14960 Physcomitrium patens HOM05D002230 ORTHO05D002441 1.3e-11 74.7 150 32.0
PSO421G0277 Papaver somniferum HOM05D002230 ORTHO05D002441 1.7e-11 74.3 114 40.4
PSO832G2976 Papaver somniferum HOM05D002230 ORTHO05D002441 1.7e-11 74.3 113 46.0
Mapoly0040s0120 Marchantia polymorpha HOM05D002230 ORTHO05D002441 2.2e-11 73.9 122 35.2
AUR62018398 Chenopodium quinoa HOM05D002230 ORTHO05D002441 2.8e-11 73.6 132 35.6
PSO384G3823 Papaver somniferum HOM05D002230 ORTHO05D002441 3.7e-11 73.2 134 37.3
SMO358G0014 Selaginella moellendorffii HOM05D002230 ORTHO05D002441 3.7e-11 73.2 144 31.9
AagrBONN_evm.TU.Sc2ySwM_369.529 Anthoceros agrestis HOM05D002230 ORTHO05D002441 1.1e-10 71.6 114 36.8
PSO675G3184 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-10 69.3 117 37.6
PSO781G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-10 69.3 117 37.6
PSO781G0074 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-10 69.3 117 37.6
PSO781G0106 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-10 69.3 117 37.6
PSO781G0261 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-10 69.3 117 37.6
PSO781G0262 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-10 69.3 117 37.6
Haze_26692 Corylus avellana HOM05D002230 ORTHO05D002441 1.6e-09 67.8 132 35.6
PSO017G1730 Papaver somniferum HOM05D002230 ORTHO05D002441 7.7e-09 65.5 124 37.9
PSO423G0165 Papaver somniferum HOM05D002230 ORTHO05D002441 7.7e-09 65.5 79 53.2
Actinidia32938 Actinidia chinensis HOM05D002230 ORTHO05D002441 1.0e-08 65.1 85 40.0
PSO063G5780 Papaver somniferum HOM05D002230 ORTHO05D002441 1.7e-08 64.3 79 53.2
Cre10.g445600 Chlamydomonas reinhardtii HOM05D002230 ORTHO05D002441 2.2e-08 63.9 110 34.5
PSO782G4102 Papaver somniferum HOM05D002230 ORTHO05D302329 2.2e-08 63.9 113 35.4
PSO017G6673 Papaver somniferum HOM05D002230 ORTHO05D002441 5.0e-08 62.8 161 33.5
FAN22G2096 Fragaria x ananassa HOM05D002230 ORTHO05D002441 6.5e-08 62.4 85 36.5
PSO170G0074 Papaver somniferum HOM05D002230 ORTHO05D002441 6.5e-08 62.4 101 43.6
PRCOL_00006812 Prasinoderma coloniale HOM05D002230 ORTHO05D002441 1.5e-07 61.2 107 33.6
MCO01G316 Micromonas commoda HOM05D002230 ORTHO05D002441 4.2e-07 59.7 131 29.8
Oeu023211.3 Olea europaea HOM05D002230 ORTHO05D002441 9.4e-07 58.5 181 26.0
PSO017G2604 Papaver somniferum HOM05D002230 ORTHO05D002441 1.6e-06 57.8 118 33.1
PSO170G5838 Papaver somniferum HOM05D002230 ORTHO05D002441 2.7e-06 57.0 93 43.0
GSVIVG01021891001 Vitis vinifera HOM05D002230 ORTHO05D002441 4.7e-06 56.2 85 35.3
PSO170G1887 Papaver somniferum HOM05D002230 ORTHO05D002441 8.0e-06 55.5 118 32.2
PSO210G5793 Papaver somniferum HOM05D002230 ORTHO05D002441 8.0e-06 55.5 118 32.2
PSO339G4603 Papaver somniferum HOM05D002230 ORTHO05D002441 8.0e-06 55.5 118 32.2


User provided reference genes

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