Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.7e-91 339.3 172 100.0
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.2e-89 333.2 172 98.8
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.0e-56 223.8 164 72.0
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.3e-56 223.4 149 73.2
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 1.8e-53 213.0 165 67.3
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 2.4e-53 212.6 167 67.1
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 2.9e-51 205.7 151 67.5
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 8.4e-51 204.1 147 72.8
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 8.4e-51 204.1 167 67.1
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.9e-50 203.0 158 68.4
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 1.9e-50 203.0 195 59.0
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 2.4e-50 202.6 157 68.2
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 3.2e-50 202.2 167 65.9
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 4.2e-50 201.8 167 65.9
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 5.4e-50 201.4 150 64.0
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 7.1e-50 201.1 171 64.9
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 9.3e-50 200.7 135 75.6
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.2e-49 200.3 153 69.9
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 2.1e-49 199.5 158 66.5
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 4.6e-49 198.4 171 63.7
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 4.6e-49 198.4 153 66.0
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 6.0e-49 198.0 164 65.9
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.0e-48 197.2 125 77.6
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.3e-48 196.8 162 64.2
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.8e-48 196.4 164 62.8
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 1.8e-48 196.4 124 78.2
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 3.0e-48 195.7 165 66.7
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 3.3e-47 192.2 163 63.8
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 5.6e-47 191.4 120 80.0
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 9.6e-47 190.7 165 63.0
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 9.6e-47 190.7 159 67.9
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.6e-46 189.9 161 62.7
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.6e-46 189.9 165 63.6
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 1.6e-46 189.9 165 65.5
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 1.6e-46 189.9 124 75.0
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.6e-46 189.9 135 71.9
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 2.8e-46 189.1 151 68.9
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 2.8e-46 189.1 146 67.8
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 3.7e-46 188.7 170 58.8
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 3.7e-46 188.7 162 64.2
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.8e-46 188.3 162 63.6
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 6.2e-46 188.0 165 64.8
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.4e-45 186.8 124 75.0
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 1.4e-45 186.8 165 64.8
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 4.0e-45 185.3 146 65.8
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 5.3e-45 184.9 149 67.8
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 9.0e-45 184.1 161 64.0
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.2e-44 183.7 145 66.2
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.5e-44 183.3 145 66.2
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 1.5e-44 183.3 145 66.2
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 1.5e-44 183.3 145 66.2
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.5e-44 183.3 145 66.2
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.5e-44 183.3 167 61.7
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 2.0e-44 183.0 161 63.4
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 2.0e-44 183.0 123 74.0
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 2.0e-44 183.0 145 66.2
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 2.0e-44 183.0 173 58.4
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 4.5e-44 181.8 157 63.7
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 5.8e-44 181.4 153 60.8
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 7.6e-44 181.0 109 82.6
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 7.6e-44 181.0 108 80.6
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 9.9e-44 180.6 166 59.6
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 9.9e-44 180.6 154 63.0
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 1.7e-43 179.9 161 60.9
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 2.9e-43 179.1 108 83.3
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 3.8e-43 178.7 150 63.3
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 4.9e-43 178.3 174 59.2
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.9e-42 176.4 168 57.1
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 2.4e-42 176.0 164 62.2
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.2e-41 173.7 155 60.0
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.0e-40 170.6 162 51.2
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.0e-40 170.6 170 57.1
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 2.3e-40 169.5 161 57.8
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 6.7e-40 167.9 143 65.0
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 2.1e-38 162.9 169 51.5
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 2.1e-38 162.9 159 57.9
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 3.7e-38 162.2 103 77.7
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 4.8e-38 161.8 165 55.2
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.1e-37 160.6 102 78.4
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 5.3e-37 158.3 160 51.2
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 9.0e-37 157.5 121 62.8
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.5e-36 156.8 98 78.6
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.5e-36 156.8 98 78.6
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 2.0e-36 156.4 158 55.1
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 2.6e-36 156.0 136 59.6
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.0e-35 154.1 184 50.0
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.3e-35 153.7 108 70.4
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 2.9e-35 152.5 139 57.6
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 9.3e-34 147.5 108 67.6
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.6e-33 146.7 102 73.5
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 3.5e-33 145.6 161 52.2
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 6.0e-33 144.8 116 62.1
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 1.3e-32 143.7 124 60.5
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 2.3e-32 142.9 160 51.9
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.9e-31 139.8 99 73.7
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 9.0e-29 131.0 86 70.9
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 8.5e-27 124.4 90 63.3
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 4.7e-17 92.0 92 56.5
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.7e-14 83.6 103 49.5
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 1.7e-11 73.6 135 31.9
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 4.2e-10 68.9 110 36.4
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 2.7e-09 66.2 68 52.9
Pp3c22_3530 Physcomitrium patens HOM05D007331 ORTHO05D009273 2.2e-06 56.6 120 34.2


User provided reference genes

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