Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4636 Papaver somniferum HOM05D006587 ORTHO05D008487 7.4e-195 683.7 354 100.0
PSO302G0285 Papaver somniferum HOM05D006587 ORTHO05D008487 1.0e-188 663.3 354 97.2
CANSAT78G1956 Cannabis sativa HOM05D006587 ORTHO05D008487 1.3e-135 486.9 353 72.2
TAR362G0294 Trochodendron aralioides HOM05D006587 ORTHO05D008487 9.0e-132 474.2 358 70.7
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 3.8e-130 468.8 305 76.4
Ciclev10005176m.g Citrus clementina HOM05D006587 ORTHO05D008487 1.6e-128 463.4 367 65.9
HanXRQChr13g0400281 Helianthus annuus HOM05D006587 ORTHO05D008487 7.8e-128 461.1 301 75.1
Atru.chr4.2522 Acer truncatum HOM05D006587 ORTHO05D008487 2.3e-127 459.5 361 68.1
GSVIVG01017920001 Vitis vinifera HOM05D006587 ORTHO05D008487 2.3e-127 459.5 355 66.5
TAR633G1367 Trochodendron aralioides HOM05D006587 ORTHO05D008487 3.9e-127 458.8 359 71.0
Potri.008G149800 Populus trichocarpa HOM05D006587 ORTHO05D008487 5.6e-126 454.9 306 72.5
Cc03_g03390 Coffea canephora HOM05D006587 ORTHO05D008487 1.3e-125 453.8 304 72.4
Migut.N00169 Erythranthe guttata HOM05D006587 ORTHO05D008487 1.3e-125 453.8 302 70.9
Actinidia23494 Actinidia chinensis HOM05D006587 ORTHO05D008487 2.1e-125 453.0 303 73.6
TWI73G1280 Tripterygium wilfordii HOM05D006587 ORTHO05D008487 2.1e-125 453.0 353 68.8
PGR004G2885 Punica granatum HOM05D006587 ORTHO05D008487 2.8e-125 452.6 305 73.4
ECA236G2554 Erigeron canadensis HOM05D006587 ORTHO05D008487 8.1e-125 451.1 301 74.1
Lsat_1_v5_gn_9_80941 Lactuca sativa HOM05D006587 ORTHO05D008487 8.1e-125 451.1 301 74.8
CSS0008441 Camellia sinensis var. sinensis HOM05D006587 ORTHO05D008487 1.4e-124 450.3 306 72.9
Cfa015608 Carpinus fangiana HOM05D006587 ORTHO05D006035 1.4e-124 450.3 333 69.7
MD13G1186800 Malus domestica HOM05D006587 ORTHO05D008487 1.8e-124 449.9 302 72.8
MD16G1187700 Malus domestica HOM05D006587 ORTHO05D008487 1.8e-124 449.9 351 66.1
BolC9t58560H Brassica oleracea HOM05D006587 ORTHO05D008487 2.4e-124 449.5 307 71.3
Rhsim04G0204300 Rhododendron simsii HOM05D006587 ORTHO05D008487 3.1e-124 449.1 303 72.6
BcaC04g18580 Brassica carinata HOM05D006587 ORTHO05D008487 4.0e-124 448.7 307 71.3
C09p56970 Brassica napus HOM05D006587 ORTHO05D008487 4.0e-124 448.7 307 71.3
BcaB08g36587 Brassica carinata HOM05D006587 ORTHO05D008487 6.9e-124 448.0 308 71.1
Prupe.1G154500 Prunus persica HOM05D006587 ORTHO05D008487 9.0e-124 447.6 351 66.7
Sc19g0004360 Simmondsia chinensis HOM05D006587 ORTHO05D008487 1.2e-123 447.2 359 67.4
MSTRG.24750 Avicennia marina HOM05D006587 ORTHO05D008487 2.0e-123 446.4 352 63.4
ClCG05G005300 Citrullus lanatus HOM05D006587 ORTHO05D008487 5.8e-123 444.9 362 67.1
THA.LOC104818820 Tarenaya hassleriana HOM05D006587 ORTHO05D008487 7.6e-123 444.5 301 72.1
Manes.03G181700 Manihot esculenta HOM05D006587 ORTHO05D008487 1.3e-122 443.7 305 72.5
AL6G30780 Arabidopsis lyrata HOM05D006587 ORTHO05D008487 2.9e-122 442.6 306 70.9
AT5G19300 Arabidopsis thaliana HOM05D006587 ORTHO05D008487 3.8e-122 442.2 306 71.2
Nitab4.5_0000144g0120 Nicotiana tabacum HOM05D006587 ORTHO05D008487 3.8e-122 442.2 358 64.8
Sp6g25120 Schrenkiella parvula HOM05D006587 ORTHO05D008487 3.8e-122 442.2 305 70.8
A10p20380 Brassica napus HOM05D006587 ORTHO05D008487 4.9e-122 441.8 305 71.1
MELO3C006549.2 Cucumis melo HOM05D006587 ORTHO05D008487 4.9e-122 441.8 362 66.0
Actinidia40165 Actinidia chinensis HOM05D006587 ORTHO05D008487 6.4e-122 441.4 299 72.2
BraA10t44108Z Brassica rapa HOM05D006587 ORTHO05D008487 6.4e-122 441.4 305 71.1
CAN.G69.11 Capsicum annuum HOM05D006587 ORTHO05D008487 6.4e-122 441.4 359 65.5
Sopen01g031480 Solanum pennellii HOM05D006587 ORTHO05D008487 6.4e-122 441.4 357 63.0
Thhalv10013731m.g Eutrema salsugineum HOM05D006587 ORTHO05D008487 1.4e-121 440.3 303 71.6
Solyc01g079710.3 Solanum lycopersicum HOM05D006587 ORTHO05D008487 1.9e-121 439.9 357 62.7
CiPaw.02G094600 Carya illinoinensis HOM05D006587 ORTHO05D008487 2.4e-121 439.5 353 66.6
CsaV3_3G013530 Cucumis sativus L. HOM05D006587 ORTHO05D008487 2.4e-121 439.5 362 65.7
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 2.4e-121 439.5 304 73.0
Glyma.20G143100 Glycine max HOM05D006587 ORTHO05D008487 3.2e-121 439.1 303 72.3
SalBow5G0644 Salvia bowleyana HOM05D006587 ORTHO05D008487 3.2e-121 439.1 301 70.4
Thecc.04G226500 Theobroma cacao HOM05D006587 ORTHO05D008487 5.4e-121 438.3 306 69.9
CARHR193670 Cardamine hirsuta HOM05D006587 ORTHO05D008487 1.2e-120 437.2 306 70.3
FAN07G2036 Fragaria x ananassa HOM05D006587 ORTHO05D008487 1.6e-120 436.8 354 66.1
VMungo0720G0184 Vigna mungo HOM05D006587 ORTHO05D008487 2.1e-120 436.4 303 71.3
Carub.0006s1763 Capsella rubella HOM05D006587 ORTHO05D008487 6.0e-120 434.9 306 69.6
MBI17_g12493_MAGBIO Magnolia biondii HOM05D006587 ORTHO05D008487 1.0e-119 434.1 278 74.5
DCAR_002398 Daucus carota HOM05D006587 ORTHO05D008487 1.3e-119 433.7 305 69.8
Ca_10966_v3 Cicer arietinum L. HOM05D006587 ORTHO05D008487 2.3e-119 433.0 301 70.8
Lalb_Chr06g0164781 Lupinus albus HOM05D006587 ORTHO05D008487 2.3e-119 433.0 301 71.4
TPR.G5533 Trifolium pratense HOM05D006587 ORTHO05D008487 2.3e-119 433.0 355 65.4
Eucgr.H03560 Eucalyptus grandis HOM05D006587 ORTHO05D008487 3.9e-119 432.2 304 70.1
Sed0010167 Sechium edule HOM05D006587 ORTHO05D008487 5.1e-119 431.8 304 70.4
Gorai.002G024100 Gossypium raimondii HOM05D006587 ORTHO05D008487 6.7e-119 431.4 363 61.2
Ah.13g074000 Amaranthus hybridus HOM05D006587 ORTHO05D008487 1.5e-118 430.3 302 68.9
Gohir.A01G023600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 2.5e-118 429.5 363 60.9
Phvul.007G053900 Phaseolus vulgaris HOM05D006587 ORTHO05D008487 4.3e-118 428.7 309 69.6
EL10As3g23313 Beta vulgaris HOM05D006587 ORTHO05D008487 7.4e-118 427.9 358 64.0
Lj5g0006939 Lotus japonicus HOM05D006587 ORTHO05D008487 7.4e-118 427.9 355 67.0
Gohir.D01G021600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 9.6e-118 427.6 363 60.6
Medtr1g105065 Medicago truncatula HOM05D006587 ORTHO05D008487 1.3e-117 427.2 353 63.2
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea HOM05D006587 ORTHO05D008487 1.6e-117 426.8 304 71.4
PGSC0003DMG400008999 Solanum tuberosum HOM05D006587 ORTHO05D008487 1.6e-117 426.8 388 58.5
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea HOM05D006587 ORTHO05D008487 2.1e-117 426.4 304 71.4
RcHm_v2.0_Chr4g0417131 Rosa chinensis HOM05D006587 ORTHO05D008487 2.1e-117 426.4 353 66.3
Aa31LG11G10390 Aethionema arabicum HOM05D006587 ORTHO05D008487 1.4e-116 423.7 301 68.8
Sabra08G0113900 Salix brachista HOM05D006587 ORTHO05D008487 8.4e-114 414.5 288 70.8
HPP92_010726 Vanilla planifolia HOM05D006587 ORTHO05D008487 1.4e-113 413.7 304 68.8
Psat6g209880 Pisum sativum HOM05D006587 ORTHO05D008487 7.1e-113 411.4 351 62.1
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.2e-112 410.6 289 71.3
SalBow5G2730 Salvia bowleyana HOM05D006587 ORTHO05D008487 3.5e-112 409.1 285 69.1
Haze_00934 Corylus avellana HOM05D006587 ORTHO05D008487 1.0e-111 407.5 360 63.6
Potri.010G091400 Populus trichocarpa HOM05D006587 ORTHO05D008487 1.0e-111 407.5 359 64.3
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 2.3e-111 406.4 361 63.7
Os04g0244500 Oryza sativa ssp. japonica HOM05D006587 ORTHO05D008487 4.3e-110 402.1 302 65.9
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 5.6e-110 401.7 286 69.9
Aqoxy2G03329 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 1.3e-109 400.6 304 64.8
SGA_v2.0_scaffold10G05110 Striga asiatica HOM05D006587 ORTHO05D008487 6.2e-109 398.3 307 64.8
Peaxi162Scf01336g00122 Petunia axillaris HOM05D006587 ORTHO05D008487 4.5e-107 392.1 353 62.0
Dinv44504 Davidia involucrata HOM05D006587 ORTHO05D008487 3.2e-105 386.0 246 74.8
Lj3A741G38 Lonicera japonica HOM05D006587 ORTHO05D008487 1.9e-102 376.7 290 68.6
Dinv38415 Davidia involucrata HOM05D006587 ORTHO05D008487 7.4e-102 374.8 261 71.6
Nitab4.5_0000180g0030 Nicotiana tabacum HOM05D006587 ORTHO05D008487 7.4e-102 374.8 358 57.8
AUR62043415 Chenopodium quinoa HOM05D006587 ORTHO05D008487 2.0e-99 366.7 264 67.0
ATR0626G244 Amborella trichopoda HOM05D006587 ORTHO05D008487 1.3e-93 347.4 257 65.8
QL06p003535 Quercus lobata HOM05D006587 ORTHO05D008487 1.4e-92 344.0 244 69.7
Cpa.g.sc147.29 Carica papaya HOM05D006587 ORTHO05D008487 3.1e-92 342.8 237 70.5
SMO364G0578 Selaginella moellendorffii HOM05D006587 ORTHO05D008487 3.2e-89 332.8 307 56.7
Pp3c7_20660 Physcomitrium patens HOM05D006587 ORTHO05D008487 4.7e-88 328.9 304 55.9
Mapoly0049s0075 Marchantia polymorpha HOM05D006587 ORTHO05D008487 5.1e-87 325.5 302 52.6
unitig_899.g15640 Utricularia gibba HOM05D006587 ORTHO05D008487 1.1e-84 317.8 303 57.1
Sabra10G0051900 Salix brachista HOM05D006587 ORTHO05D008487 5.3e-84 315.5 300 55.3
Aqoxy2G03328 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 1.1e-76 291.2 357 53.5
Duzib151G0305 Durio zibethinus HOM05D006587 ORTHO05D008487 5.9e-75 285.4 307 52.4
PRCOL_00002662 Prasinoderma coloniale HOM05D006587 ORTHO05D008487 1.3e-74 284.3 324 50.0
AUR62038173 Chenopodium quinoa HOM05D006587 ORTHO05D008487 1.5e-73 280.8 279 52.3
Zm00001eb373340 Zea mays HOM05D006587 ORTHO05D008487 9.7e-70 268.1 208 66.3
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 2.6e-62 243.4 240 54.6
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 4.8e-61 239.2 297 49.5
FvH4_4g14960 Fragaria vesca HOM05D006587 ORTHO05D008487 1.9e-57 227.3 163 73.0
CDE05G0907 Ceratophyllum demersum HOM05D006587 ORTHO05D008487 1.7e-53 214.2 172 63.4
Oeu040660.1 Olea europaea HOM05D006587 ORTHO05D008487 3.3e-49 199.9 146 67.8
Cfa024389 Carpinus fangiana HOM05D006587 ORTHO05D008487 1.2e-48 198.0 373 38.6
Cre16.g670617 Chlamydomonas reinhardtii HOM05D006587 ORTHO05D008487 7.5e-46 188.7 341 36.1
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis HOM05D006587 ORTHO05D008487 1.4e-44 184.5 182 57.7
Glyma.10G250600 Glycine max HOM05D006587 ORTHO05D008487 1.6e-43 181.0 121 74.4
COL.COLO4_06205 Corchorus olitorius HOM05D006587 ORTHO05D008487 5.6e-41 172.6 195 51.8
Lalb_Chr02g0144661 Lupinus albus HOM05D006587 ORTHO05D008487 3.7e-37 159.8 181 50.8
QL06p003531 Quercus lobata HOM05D006587 ORTHO05D008487 3.0e-26 123.6 68 83.8
PSO151G0052 Papaver somniferum HOM05D004736 ORTHO05D030424 3.1e-23 113.6 75 77.3
Lalb_Chr02g0144651 Lupinus albus HOM05D006587 ORTHO05D008487 2.9e-13 80.5 62 62.9
PSO541G6250 Papaver somniferum HOM05D004736 ORTHO05D030424 1.1e-12 78.6 43 88.4
Lsat_1_v5_gn_9_31900 Lactuca sativa HOM05D006587 ORTHO05D011576 7.8e-11 72.4 82 42.7
TAR362G0446 Trochodendron aralioides HOM05D006587 ORTHO05D008487 1.7e-10 71.2 91 59.3
AUR62038172 Chenopodium quinoa HOM05D006503 ORTHO05D008116 2.3e-10 70.9 101 40.6
SEGI_15408 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 3.9e-10 70.1 45 68.9
arahy.Tifrunner.gnm1.ann1.Y836FI Arachis hypogaea HOM05D000158 ORTHO05D000197 1.5e-09 68.2 98 37.8
Gorai.004G106600 Gossypium raimondii HOM05D006587 ORTHO05D008487 3.6e-08 63.5 39 76.9
SEGI_20820 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 3.1e-07 60.5 38 78.9
Gorai.012G092500 Gossypium raimondii HOM05D006587 ORTHO05D008487 5.3e-07 59.7 52 61.5


User provided reference genes

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