Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4263 Papaver somniferum HOM05D004349 ORTHO05D005097 3.9e-105 384.8 193 100.0
PSO528G0119 Papaver somniferum HOM05D004349 ORTHO05D005097 1.8e-89 332.8 169 98.2
Aqoxy1G00443 Aquilegia oxysepala HOM05D004349 ORTHO05D005097 1.6e-82 309.7 168 91.1
GSVIVG01033427001 Vitis vinifera HOM05D004349 ORTHO05D005097 1.8e-81 306.2 169 89.3
Dinv25025 Davidia involucrata HOM05D004349 ORTHO05D005097 2.3e-81 305.8 168 88.1
Haze_20078 Corylus avellana HOM05D004349 ORTHO05D005097 6.7e-81 304.3 169 89.3
CiPaw.09G026100 Carya illinoinensis HOM05D004349 ORTHO05D005097 8.7e-81 303.9 169 88.8
Hma1.2p1_0516F.1_g170550 Hydrangea macrophylla HOM05D004349 ORTHO05D005097 8.7e-81 303.9 168 88.1
Atru.chr8.1222 Acer truncatum HOM05D004349 ORTHO05D005097 1.5e-80 303.1 169 88.8
Cfa020113 Carpinus fangiana HOM05D004349 ORTHO05D005097 1.9e-80 302.8 169 88.8
Nitab4.5_0001874g0080 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.9e-80 302.8 176 83.0
Prupe.7G086000 Prunus persica HOM05D004349 ORTHO05D005097 1.9e-80 302.8 166 88.0
Cc09_g02100 Coffea canephora HOM05D004349 ORTHO05D005097 2.5e-80 302.4 169 87.6
COL.COLO4_29437 Corchorus olitorius HOM05D004349 ORTHO05D005097 2.5e-80 302.4 167 88.0
Gohir.D11G331900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 2.5e-80 302.4 169 87.6
Gorai.007G362800 Gossypium raimondii HOM05D004349 ORTHO05D005097 2.5e-80 302.4 169 87.6
Solyc04g081430.3 Solanum lycopersicum HOM05D004349 ORTHO05D005097 4.3e-80 301.6 169 86.4
Sopen04g035040 Solanum pennellii HOM05D004349 ORTHO05D005097 4.3e-80 301.6 169 86.4
QL11p005722 Quercus lobata HOM05D004349 ORTHO05D005097 5.7e-80 301.2 168 86.9
Actinidia01590 Actinidia chinensis HOM05D004349 ORTHO05D005097 9.7e-80 300.4 168 86.3
TWI74G1533 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 1.3e-79 300.1 169 87.0
ClCG10G017820 Citrullus lanatus HOM05D004349 ORTHO05D005097 1.6e-79 299.7 169 86.4
Duzib093G0127 Durio zibethinus HOM05D004349 ORTHO05D005097 1.6e-79 299.7 169 87.0
Rhsim04G0092200 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.2e-79 299.3 168 86.9
EL10Ac2g02766 Beta vulgaris HOM05D004349 ORTHO05D005097 2.8e-79 298.9 167 85.6
Ciclev10012936m.g Citrus clementina HOM05D004349 ORTHO05D005097 2.8e-79 298.9 169 87.0
MELO3C009592.2 Cucumis melo HOM05D004349 ORTHO05D005097 2.8e-79 298.9 169 86.4
Peaxi162Scf00463g00127 Petunia axillaris HOM05D004349 ORTHO05D005097 2.8e-79 298.9 169 85.8
Rhsim04G0092400 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.8e-79 298.9 168 86.3
Sed0001935 Sechium edule HOM05D004349 ORTHO05D005097 3.7e-79 298.5 169 87.0
FAN05G0412 Fragaria x ananassa HOM05D004349 ORTHO05D005097 4.8e-79 298.1 167 87.4
FAN05G3233 Fragaria x ananassa HOM05D004349 ORTHO05D005097 4.8e-79 298.1 167 87.4
FvH4_6g21430 Fragaria vesca HOM05D004349 ORTHO05D005097 6.3e-79 297.7 166 88.0
FAN02G1450 Fragaria x ananassa HOM05D004349 ORTHO05D005097 6.3e-79 297.7 166 88.0
Manes.08G039900 Manihot esculenta HOM05D004349 ORTHO05D005097 6.3e-79 297.7 169 87.0
RcHm_v2.0_Chr4g0406251 Rosa chinensis HOM05D004349 ORTHO05D005097 6.3e-79 297.7 166 88.0
Potri.016G062800 Populus trichocarpa HOM05D004349 ORTHO05D005097 1.8e-78 296.2 169 86.4
Migut.L01584 Erythranthe guttata HOM05D004349 ORTHO05D005097 2.4e-78 295.8 169 84.6
Sed0019694 Sechium edule HOM05D004349 ORTHO05D005097 2.4e-78 295.8 169 86.4
CANSAT54G2032 Cannabis sativa HOM05D004349 ORTHO05D005097 5.3e-78 294.7 169 84.6
QL05p072253 Quercus lobata HOM05D004349 ORTHO05D005097 5.3e-78 294.7 168 84.5
MD14G1049500 Malus domestica HOM05D004349 ORTHO05D005097 6.9e-78 294.3 166 85.5
MSTRG.10496 Avicennia marina HOM05D004349 ORTHO05D005097 9.0e-78 293.9 169 85.8
TWI77G0543 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 1.2e-77 293.5 168 85.7
ECA240G0294 Erigeron canadensis HOM05D004349 ORTHO05D005097 2.6e-77 292.4 169 85.2
arahy.Tifrunner.gnm1.ann1.9IE653 Arachis hypogaea HOM05D004349 ORTHO05D005097 3.4e-77 292.0 166 84.9
CsaV3_7G005510 Cucumis sativus L. HOM05D004349 ORTHO05D005097 3.4e-77 292.0 169 85.8
MD12G1050700 Malus domestica HOM05D004349 ORTHO05D005097 3.4e-77 292.0 166 84.9
arahy.Tifrunner.gnm1.ann1.FMT65J Arachis hypogaea HOM05D004349 ORTHO05D005097 1.0e-76 290.4 166 83.7
Glyma.07G029300 Glycine max HOM05D004349 ORTHO05D005097 1.0e-76 290.4 169 82.8
Psat5g280400 Pisum sativum HOM05D004349 ORTHO05D005097 1.7e-76 289.7 169 82.8
Ah.13g075520 Amaranthus hybridus HOM05D004349 ORTHO05D005097 2.2e-76 289.3 169 82.8
Glyma.08G213500 Glycine max HOM05D004349 ORTHO05D005097 2.2e-76 289.3 169 82.2
Medtr6g471120 Medicago truncatula HOM05D004349 ORTHO05D005097 2.2e-76 289.3 169 82.2
Phvul.010G156700 Phaseolus vulgaris HOM05D004349 ORTHO05D005097 3.8e-76 288.5 169 82.2
Nn2g15821 Nelumbo nucifera HOM05D004349 ORTHO05D005097 5.0e-76 288.1 167 85.6
PGSC0003DMG401009863 Solanum tuberosum HOM05D004349 ORTHO05D005097 5.0e-76 288.1 186 78.0
Cpa.g.sc85.16 Carica papaya HOM05D004349 ORTHO05D005097 6.5e-76 287.7 169 84.0
Medtr2g094720 Medicago truncatula HOM05D004349 ORTHO05D005097 6.5e-76 287.7 169 81.7
Ca_01401_v3 Cicer arietinum L. HOM05D004349 ORTHO05D005097 8.5e-76 287.3 169 81.1
LjContig00564g0000037 Lotus japonicus HOM05D004349 ORTHO05D005097 8.5e-76 287.3 169 82.8
THA.LOC104821832 Tarenaya hassleriana HOM05D004349 ORTHO05D005097 8.5e-76 287.3 169 82.8
DCAR_018883 Daucus carota HOM05D004349 ORTHO05D005097 1.4e-75 286.6 182 78.6
Nitab4.5_0000571g0040 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.9e-75 286.2 192 76.0
Hund26707 Selenicereus undatus HOM05D004349 ORTHO05D005097 2.5e-75 285.8 207 71.0
FAN09G4703 Fragaria x ananassa HOM05D004349 ORTHO05D005097 3.2e-75 285.4 183 79.2
FAN14G0676 Fragaria x ananassa HOM05D004349 ORTHO05D005097 4.2e-75 285.0 183 79.2
FAN14G3215 Fragaria x ananassa HOM05D004349 ORTHO05D005097 4.2e-75 285.0 183 79.2
TAR623G1044 Trochodendron aralioides HOM05D004349 ORTHO05D005097 7.2e-75 284.3 169 85.2
ECA248G3305 Erigeron canadensis HOM05D004349 ORTHO05D005097 9.4e-75 283.9 169 83.4
TPR.G11586 Trifolium pratense HOM05D004349 ORTHO05D005097 9.4e-75 283.9 169 81.7
SGA_v2.0_scaffold21G09532 Striga asiatica HOM05D004349 ORTHO05D005097 4.6e-74 281.6 169 82.2
Lalb_Chr23g0277751 Lupinus albus HOM05D004349 ORTHO05D005097 1.8e-73 279.6 169 78.1
TAR623G0936 Trochodendron aralioides HOM05D004349 ORTHO05D005097 3.0e-73 278.9 149 90.6
Lj2C360G6 Lonicera japonica HOM05D004349 ORTHO05D005097 5.1e-73 278.1 149 89.9
HPP92_013495 Vanilla planifolia HOM05D004349 ORTHO05D005097 6.7e-73 277.7 158 87.3
SEGI_10501 Sequoiadendron giganteum HOM05D004349 ORTHO05D005097 8.8e-73 277.3 168 77.4
arahy.Tifrunner.gnm1.ann1.2RRL5Q Arachis hypogaea HOM05D004349 ORTHO05D005097 1.1e-72 276.9 194 72.7
Sabra06G0151800 Salix brachista HOM05D004349 ORTHO05D005097 2.0e-72 276.2 226 66.4
AL6G12510 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 2.5e-72 275.8 169 79.3
Sp6g39510 Schrenkiella parvula HOM05D004349 ORTHO05D005097 2.5e-72 275.8 169 79.3
Thhalv10021663m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 3.3e-72 275.4 169 78.7
Rhsim10G0130900 Rhododendron simsii HOM05D004349 ORTHO05D005097 3.3e-72 275.4 214 68.2
HPP92_026048 Vanilla planifolia HOM05D004349 ORTHO05D005097 5.7e-72 274.6 158 86.7
Aa31LG1G21860 Aethionema arabicum HOM05D004349 ORTHO05D005097 9.7e-72 273.9 169 78.7
Thhalv10014853m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 1.7e-71 273.1 169 78.7
Thecc.05G180500 Theobroma cacao HOM05D004349 ORTHO05D005097 2.8e-71 272.3 149 87.9
Carub.0006s0201 Capsella rubella HOM05D004349 ORTHO05D005097 3.7e-71 271.9 169 77.5
Lalb_Chr19g0125421 Lupinus albus HOM05D004349 ORTHO05D005097 4.8e-71 271.6 169 76.9
AL6G12940 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 8.2e-71 270.8 167 78.4
AT5G03220 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 8.2e-71 270.8 169 77.5
CDE02G3593 Ceratophyllum demersum HOM05D000001 ORTHO05D000424 1.8e-70 269.6 154 85.1
Lsat_1_v5_gn_1_58740 Lactuca sativa HOM05D004349 ORTHO05D005097 1.8e-70 269.6 145 91.0
AUR62015286 Chenopodium quinoa HOM05D004349 ORTHO05D005097 2.4e-70 269.2 149 85.9
Eucgr.A02508 Eucalyptus grandis HOM05D004349 ORTHO05D005097 2.4e-70 269.2 149 87.2
TPR.G23269 Trifolium pratense HOM05D004349 ORTHO05D005097 2.4e-70 269.2 169 76.3
SHI30021 Sapria himalayana HOM05D004349 ORTHO05D005097 9.1e-70 267.3 167 76.0
AT5G03500 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 1.2e-69 266.9 169 76.9
MBI18_g03872_MAGBIO Magnolia biondii HOM05D004349 ORTHO05D005097 2.6e-69 265.8 166 80.7
ATR0580G353 Amborella trichopoda HOM05D004349 ORTHO05D005097 3.4e-69 265.4 147 86.4
CARHR210130 Cardamine hirsuta HOM05D004349 ORTHO05D005097 3.4e-69 265.4 169 76.3
BcaC03g13019 Brassica carinata HOM05D004349 ORTHO05D005097 7.7e-69 264.2 172 75.6
CARHR040500 Cardamine hirsuta HOM05D004349 ORTHO05D005097 7.7e-69 264.2 169 75.1
Gohir.A11G314900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 7.7e-69 264.2 143 88.8
Os04g0661800 Oryza sativa ssp. japonica HOM05D004349 ORTHO05D005097 7.7e-69 264.2 169 79.3
VMungo0331G0313 Vigna mungo HOM05D004349 ORTHO05D005097 2.2e-68 262.7 148 84.5
BolC2t06089H Brassica oleracea HOM05D004349 ORTHO05D005097 2.9e-68 262.3 171 75.4
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 2.9e-68 262.3 169 76.3
CSS0044984 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 5.0e-68 261.5 153 84.3
Mapoly0052s0099 Marchantia polymorpha HOM05D004349 ORTHO05D005097 1.4e-67 260.0 168 74.4
vmacro17893 Vaccinium macrocarpon HOM05D004349 ORTHO05D005097 1.9e-67 259.6 239 59.8
Prupe.6G266300 Prunus persica HOM05D004349 ORTHO05D005097 6.1e-66 254.6 177 75.1
BraA02t04750Z Brassica rapa HOM05D004349 ORTHO05D005097 7.9e-66 254.2 150 81.3
Zm00001eb067450 Zea mays HOM05D004349 ORTHO05D005097 3.0e-65 252.3 168 75.6
BraA10t45308Z Brassica rapa HOM05D004349 ORTHO05D005097 2.4e-62 242.7 149 78.5
Zm00001eb432780 Zea mays HOM05D004349 ORTHO05D005097 2.4e-62 242.7 167 74.3
A10p32710 Brassica napus HOM05D004349 ORTHO05D005097 5.9e-61 238.0 155 74.2
CAN.G311.28 Capsicum annuum HOM05D004349 ORTHO05D005097 8.5e-60 234.2 124 87.9
Prupe.1G181600 Prunus persica HOM05D004349 ORTHO05D005097 8.5e-60 234.2 156 77.6
PGR004G2245 Punica granatum HOM05D004349 ORTHO05D005097 4.2e-59 231.9 126 85.7
arahy.Tifrunner.gnm1.ann1.UX8DIM Arachis hypogaea HOM05D004349 ORTHO05D005097 1.2e-58 230.3 166 73.5
Carub.0006s2456 Capsella rubella HOM05D004349 ORTHO05D005097 3.6e-58 228.8 170 71.8
C02p00910 Brassica napus HOM05D004349 ORTHO05D005097 6.1e-58 228.0 152 73.7
Sc13g0002530 Simmondsia chinensis HOM05D004349 ORTHO05D005097 8.8e-57 224.2 123 84.6
CBR_g46752 Chara braunii HOM05D004349 ORTHO05D005097 5.7e-56 221.5 189 59.8
HanXRQChr01g0024771 Helianthus annuus HOM05D004349 ORTHO05D005097 5.7e-56 221.5 127 89.0
BcaNung06685 Brassica carinata HOM05D004349 ORTHO05D005097 4.8e-55 218.4 152 71.7
Prupe.8G249100 Prunus persica HOM05D004349 ORTHO05D005097 1.8e-54 216.5 166 68.7
HanXRQChr03g0090511 Helianthus annuus HOM05D004349 ORTHO05D005097 2.0e-53 213.0 124 85.5
Prupe.1G300700 Prunus persica HOM05D004349 ORTHO05D005097 2.0e-53 213.0 132 81.1
Prupe.1G547000 Prunus persica HOM05D004349 ORTHO05D005097 4.5e-53 211.8 121 86.8
Prupe.3G021700 Prunus persica HOM05D004349 ORTHO05D005097 4.5e-53 211.8 132 80.3
Prupe.7G024200 Prunus persica HOM05D004349 ORTHO05D005097 5.9e-53 211.5 121 86.0
Prupe.1G035300 Prunus persica HOM05D004349 ORTHO05D005097 1.7e-52 209.9 123 84.6
SMO340G0091 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 3.8e-52 208.8 155 66.5
BolC9t60086H Brassica oleracea HOM05D004349 ORTHO05D005097 6.5e-52 208.0 168 64.9
AL3G38450 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.1e-51 207.2 131 77.1
Dinv24030 Davidia involucrata HOM05D004349 ORTHO05D005097 3.2e-51 205.7 131 81.7
C09p73550 Brassica napus HOM05D004349 ORTHO05D005097 7.2e-51 204.5 152 71.1
CSS0033717 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 2.3e-49 199.5 141 73.8
ATR0564G039 Amborella trichopoda HOM05D004349 ORTHO05D005097 5.7e-48 194.9 155 68.4
SMO358G0681 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 6.3e-47 191.4 134 68.7
RcHm_v2.0_Chr3g0478001 Rosa chinensis HOM05D004349 ORTHO05D005097 8.8e-41 171.0 106 81.1
Oeu057599.1 Olea europaea HOM05D004349 ORTHO05D005097 3.4e-40 169.1 90 85.6
Prupe.2G085900 Prunus persica HOM05D004349 ORTHO05D005097 5.7e-40 168.3 90 91.1
FAN05G0350 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.0e-37 159.8 94 88.3
Sabra16G0064800 Salix brachista HOM05D004349 ORTHO05D005097 1.0e-33 147.5 83 90.4
Pp3c5_20850 Physcomitrium patens HOM05D004349 ORTHO05D005097 4.4e-32 142.1 103 68.0
AagrBONN_evm.TU.Sc2ySwM_362.1623 Anthoceros agrestis HOM05D004349 ORTHO05D005097 2.0e-29 133.3 103 66.0
AagrBONN_evm.TU.Sc2ySwM_117.2767 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.3e-28 130.6 86 74.4
Rhsim04G0093300 Rhododendron simsii HOM05D004349 ORTHO05D005097 9.5e-27 124.4 73 87.7
CARHR099790 Cardamine hirsuta HOM05D004349 ORTHO05D005097 8.0e-26 121.3 82 72.0
RcHm_v2.0_Chr3g0478061 Rosa chinensis HOM05D004349 ORTHO05D005097 1.7e-23 113.6 103 58.3
CSS0042444 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 5.4e-22 108.6 75 70.7
CARHR251030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 7.0e-22 108.2 72 72.2
AL6G12900 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.0e-20 104.4 78 62.8
CARHR218030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 5.6e-19 98.6 64 75.0
MCO10G402 Micromonas commoda HOM05D004349 ORTHO05D005097 1.2e-18 97.4 156 39.1
CARHR258920 Cardamine hirsuta HOM05D004349 ORTHO05D005097 6.8e-17 91.7 65 70.8
PRCOL_00002553 Prasinoderma coloniale HOM05D004349 ORTHO05D005097 5.8e-16 88.6 130 38.5
RcHm_v2.0_Chr3g0478211 Rosa chinensis HOM05D004349 ORTHO05D005097 2.4e-14 83.2 49 83.7
RcHm_v2.0_Chr3g0478341 Rosa chinensis HOM05D004349 ORTHO05D005097 2.4e-14 83.2 49 83.7
Cre01.g062902 Chlamydomonas reinhardtii HOM05D004349 ORTHO05D005097 1.6e-13 80.5 169 33.1
Rhsim04G0093100 Rhododendron simsii HOM05D004349 ORTHO05D005097 3.5e-13 79.3 44 77.3
RcHm_v2.0_Chr3g0478621 Rosa chinensis HOM05D004349 ORTHO05D005097 4.6e-13 79.0 108 49.1
FAN04G2473 Fragaria x ananassa HOM05D004349 ORTHO05D005097 1.1e-11 74.3 39 82.1


User provided reference genes

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