Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 0.0e+00 1295.8 658 100.0
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 0.0e+00 1255.7 658 96.7
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 6.3e-264 914.1 665 70.2
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 2.2e-253 879.0 661 67.8
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 9.4e-252 873.6 630 70.5
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 1.8e-250 869.4 667 67.5
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 5.7e-249 864.4 662 66.9
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 4.7e-243 844.7 662 66.3
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 7.5e-241 837.4 660 66.1
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 6.3e-240 834.3 667 63.7
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 1.2e-238 830.1 653 65.8
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 1.3e-237 826.6 675 64.6
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 8.6e-237 823.9 668 63.6
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 1.0e-234 817.0 664 64.6
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 8.9e-234 813.9 664 63.1
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 6.3e-232 807.7 661 64.4
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 1.4e-231 806.6 661 64.4
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.0e-230 802.7 657 64.5
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 7.8e-230 800.8 667 63.4
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.7e-229 799.7 661 64.1
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.7e-229 799.7 684 61.4
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.7e-229 799.7 684 61.4
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 2.9e-229 798.9 666 64.1
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 4.3e-228 795.0 669 60.8
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 1.2e-227 793.5 669 61.0
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.1e-227 792.7 668 61.8
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 2.8e-227 792.3 668 61.5
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 6.2e-227 791.2 665 61.8
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 8.9e-226 787.3 660 62.1
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 1.9e-223 779.6 673 61.5
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 2.7e-222 775.8 668 60.8
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 1.9e-220 769.6 760 57.0
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 4.3e-220 768.5 690 61.0
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 7.3e-220 767.7 635 63.9
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 9.5e-220 767.3 671 59.8
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 6.2e-219 764.6 673 59.4
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 5.2e-218 761.5 673 59.4
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 9.8e-217 757.3 671 59.8
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 1.3e-216 756.9 662 60.9
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 1.7e-216 756.5 662 60.1
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 1.7e-216 756.5 672 58.5
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 2.2e-216 756.1 657 61.5
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 2.9e-216 755.7 662 60.3
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 6.4e-216 754.6 663 59.9
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 1.9e-215 753.1 662 60.0
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 1.9e-215 753.1 666 59.6
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 4.1e-215 751.9 666 59.6
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 2.7e-214 749.2 674 59.2
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 8.1e-211 737.6 671 58.9
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 4.0e-210 735.3 659 59.0
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 2.9e-208 729.2 586 64.8
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 4.9e-208 728.4 670 58.5
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 1.2e-206 723.8 670 58.2
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 1.6e-206 723.4 667 56.5
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 4.6e-206 721.8 668 57.9
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 3.0e-205 719.2 669 58.6
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 3.0e-205 719.2 662 57.6
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 3.9e-205 718.8 917 46.3
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 2.5e-204 716.1 662 58.0
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 2.5e-204 716.1 638 59.2
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 2.1e-203 713.0 661 57.6
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 4.7e-203 711.8 659 57.2
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 8.1e-203 711.1 658 57.4
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 8.9e-202 707.6 675 56.7
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 9.9e-201 704.1 668 57.9
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 2.9e-200 702.6 670 57.6
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 8.4e-200 701.0 669 57.0
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 1.9e-199 699.9 659 56.3
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 3.2e-199 699.1 656 56.6
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 4.2e-199 698.7 680 55.7
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 7.1e-199 698.0 663 57.5
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 9.3e-199 697.6 746 52.3
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 6.0e-198 694.9 655 56.5
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 8.7e-197 691.0 673 55.4
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 2.5e-196 689.5 660 55.9
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 2.1e-195 686.4 638 58.0
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 4.0e-194 682.2 653 56.4
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 5.3e-194 681.8 667 54.9
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 6.9e-194 681.4 665 54.6
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 2.9e-192 676.0 668 54.6
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 1.1e-191 674.1 667 52.9
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 1.4e-191 673.7 669 54.3
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 1.9e-191 673.3 667 54.6
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 1.9e-191 673.3 663 54.4
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 4.2e-191 672.2 663 54.0
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 1.2e-190 670.6 663 54.4
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 4.6e-190 668.7 669 54.1
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 5.1e-189 665.2 667 53.8
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 5.6e-188 661.8 665 52.8
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 2.1e-187 659.8 666 53.5
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 6.2e-187 658.3 672 52.5
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 1.1e-186 657.5 666 53.9
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 4.5e-185 652.1 659 53.3
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 1.3e-184 650.6 660 52.9
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 2.6e-177 626.3 623 54.6
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 8.4e-176 621.3 663 50.5
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 1.9e-172 610.1 680 50.9
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 1.2e-169 600.9 683 51.7
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 3.8e-168 595.9 553 59.1
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 2.5e-164 583.2 712 45.4
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 5.5e-159 565.5 668 46.7
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 2.2e-152 543.5 491 56.2
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 5.5e-135 485.7 533 49.7
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 1.0e-133 481.5 656 42.5
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 4.2e-127 459.5 548 48.0
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 1.1e-98 365.2 715 35.7
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 8.6e-96 355.5 293 64.5
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 8.9e-85 318.9 666 33.5
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 1.2e-81 308.5 424 45.5
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 2.3e-80 304.3 539 37.3
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 1.5e-76 291.6 650 30.5
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.4e-61 241.9 369 43.4
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 3.8e-59 233.8 164 74.4
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 6.1e-49 199.9 466 34.1
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 2.0e-44 184.9 139 68.3
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 3.3e-39 167.5 183 49.2
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 7.7e-36 156.4 136 58.1
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 2.8e-30 137.9 174 53.4
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 2.6e-28 131.3 100 66.0
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 1.3e-27 129.0 346 30.1
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 5.5e-18 97.1 85 55.3
COL.COLO4_05779 Corchorus olitorius HOM05D005966 ORTHO05D007584 2.1e-17 95.1 58 67.2
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 8.0e-17 93.2 119 39.5
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 1.4e-16 92.4 55 80.0
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 1.4e-13 82.4 65 60.0
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 3.5e-12 77.8 50 76.0
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 1.7e-11 75.5 55 61.8
AUR62041250 Chenopodium quinoa HOM05D005966 ORTHO05D007584 8.8e-08 63.2 49 63.3
TAR626G0958 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.2e-07 62.8 37 83.8
TAR362G1246 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.7e-07 60.5 37 81.1
Pp3c19_8370 Physcomitrium patens HOM05D005966 ORTHO05D007584 4.9e-06 57.4 130 32.3


User provided reference genes

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