Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G3909 Papaver somniferum HOM05D003724 ORTHO05D004367 5.0e-120 434.5 227 100.0
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 2.4e-90 335.9 199 88.9
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 3.9e-72 275.4 154 92.9
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 8.7e-72 274.2 154 91.6
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 3.3e-71 272.3 154 90.9
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 3.7e-70 268.9 154 90.3
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 1.1e-69 267.3 154 88.3
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 1.2e-68 263.8 154 89.6
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 1.0e-64 250.8 154 83.1
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 7.7e-44 181.4 156 66.0
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 8.0e-41 171.4 188 54.3
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 1.5e-39 167.2 188 51.6
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.3e-35 154.1 171 52.0
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.9e-34 150.2 170 51.2
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 7.2e-34 148.3 151 58.3
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 9.4e-34 147.9 158 52.5
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 1.2e-33 147.5 164 54.3
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.6e-33 146.0 178 48.9
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 1.4e-32 144.1 165 52.1
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 2.3e-32 143.3 164 50.0
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 3.0e-32 142.9 191 42.4
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 8.8e-32 141.4 184 45.7
CAN.G804.3 Capsicum annuum HOM05D003724 ORTHO05D004367 1.2e-31 141.0 156 50.6
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.5e-31 140.6 162 49.4
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 2.0e-31 140.2 189 44.4
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.0e-31 140.2 128 59.4
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 4.4e-31 139.0 155 51.0
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.3e-30 137.5 129 59.7
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.3e-30 137.5 156 50.0
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 1.7e-30 137.1 180 43.9
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 1.7e-30 137.1 174 46.6
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.7e-30 137.1 154 50.6
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 1.7e-30 137.1 174 46.0
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 2.8e-30 136.3 169 47.9
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 4.8e-30 135.6 169 47.9
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 4.8e-30 135.6 145 51.7
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 8.3e-30 134.8 154 48.7
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 8.3e-30 134.8 157 48.4
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 1.1e-29 134.4 195 44.6
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.4e-29 134.0 174 46.6
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 2.4e-29 133.3 167 46.7
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 3.1e-29 132.9 158 46.8
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 5.4e-29 132.1 163 49.7
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 5.4e-29 132.1 171 46.2
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 7.0e-29 131.7 162 46.3
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 9.1e-29 131.3 152 51.3
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 9.1e-29 131.3 151 49.7
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 1.2e-28 131.0 145 52.4
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 2.0e-28 130.2 148 52.7
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 2.0e-28 130.2 161 48.4
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 2.0e-28 130.2 157 47.8
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 2.7e-28 129.8 161 47.2
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 2.7e-28 129.8 172 45.9
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 2.7e-28 129.8 138 52.9
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 3.5e-28 129.4 151 49.0
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 4.5e-28 129.0 171 46.2
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 7.7e-28 128.3 154 50.0
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 1.0e-27 127.9 157 46.5
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 1.0e-27 127.9 172 44.2
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 2.9e-27 126.3 157 49.0
BcaB03g15203 Brassica carinata HOM05D003724 ORTHO05D004367 3.8e-27 125.9 155 48.4
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 3.8e-27 125.9 168 48.2
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 6.5e-27 125.2 178 44.9
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 8.5e-27 124.8 168 45.2
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.5e-26 124.0 152 47.4
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 3.2e-26 122.9 146 49.3
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 3.2e-26 122.9 156 47.4
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 4.2e-26 122.5 163 43.6
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 5.5e-26 122.1 165 44.2
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 7.2e-26 121.7 173 44.5
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 9.4e-26 121.3 157 47.1
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 9.4e-26 121.3 157 47.8
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 1.2e-25 120.9 155 47.1
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 1.2e-25 120.9 155 47.1
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 1.2e-25 120.9 168 44.6
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 1.6e-25 120.6 155 47.1
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 1.6e-25 120.6 157 47.1
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.1e-25 120.2 176 44.9
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 2.1e-25 120.2 186 39.8
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 2.7e-25 119.8 155 46.5
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 2.7e-25 119.8 165 44.2
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 2.7e-25 119.8 160 46.2
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 3.6e-25 119.4 167 48.5
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 4.7e-25 119.0 149 49.0
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 6.1e-25 118.6 173 42.2
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 6.1e-25 118.6 122 50.8
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 8.0e-25 118.2 153 45.1
FvH4_2g22740 Fragaria vesca HOM05D003724 ORTHO05D004367 8.0e-25 118.2 174 43.7
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 8.0e-25 118.2 174 43.7
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 1.0e-24 117.9 154 45.5
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.0e-24 117.9 129 50.4
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 1.0e-24 117.9 156 47.4
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 1.4e-24 117.5 155 45.8
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 2.3e-24 116.7 172 43.0
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 4.0e-24 115.9 138 49.3
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 5.2e-24 115.5 160 45.6
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 5.2e-24 115.5 173 42.8
FAN12G4010 Fragaria x ananassa HOM05D003724 ORTHO05D004367 6.8e-24 115.2 152 44.1
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 1.5e-23 114.0 146 45.9
FvH4_4g23791 Fragaria vesca HOM05D003724 ORTHO05D004367 1.5e-23 114.0 162 43.2
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 2.0e-23 113.6 158 43.0
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 3.4e-23 112.8 173 41.6
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 3.4e-23 112.8 176 44.3
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 3.4e-23 112.8 173 41.6
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 9.8e-23 111.3 170 41.2
SHI17969 Sapria himalayana HOM05D003724 ORTHO05D004367 1.3e-22 110.9 120 53.3
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 6.3e-22 108.6 158 46.2
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 1.1e-21 107.8 138 45.7
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 1.1e-21 107.8 159 45.9
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 1.4e-21 107.5 157 42.7
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 1.4e-21 107.5 157 42.7
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 1.4e-21 107.5 138 46.4
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 1.8e-21 107.1 146 43.8
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 2.4e-21 106.7 176 41.5
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 9.1e-21 104.8 130 45.4
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 1.2e-20 104.4 102 55.9
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 7.7e-20 101.7 146 43.8
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 3.8e-19 99.4 80 62.5
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 3.8e-19 99.4 178 38.8
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 1.1e-18 97.8 108 50.0
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.7e-14 84.0 81 51.9
Phvul.001G261701 Phaseolus vulgaris HOM05D003724 ORTHO05D004367 2.2e-14 83.6 139 38.1
FAN07G2055 Fragaria x ananassa HOM05D003724 ORTHO05D004367 8.3e-14 81.6 136 39.7
Solyc05g015380.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.5e-10 70.9 131 39.7
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 1.8e-08 63.9 94 40.4
DCAR_028604 Daucus carota HOM05D000366 ORTHO05D000437 1.7e-06 57.4 68 42.6


User provided reference genes

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