Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 3.1e-249 864.8 472 100.0
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.7e-234 815.8 472 94.3
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 2.0e-131 473.4 379 68.3
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 1.0e-130 471.1 378 68.3
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.3e-130 470.7 340 70.6
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.9e-130 469.5 379 66.8
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 1.1e-129 467.6 380 66.1
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.9e-129 466.8 381 67.2
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 1.6e-128 463.8 379 66.8
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 2.0e-126 456.8 373 66.2
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.7e-126 455.3 346 70.8
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.2e-125 453.4 346 70.5
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 2.8e-125 453.0 374 65.5
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 3.7e-125 452.6 375 65.9
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 4.9e-125 452.2 404 63.1
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 4.9e-125 452.2 346 70.5
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 8.3e-125 451.4 343 71.7
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.4e-124 450.7 377 66.6
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 2.4e-124 449.9 380 63.4
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 3.1e-124 449.5 380 64.7
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 4.1e-124 449.1 345 71.6
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 5.4e-124 448.7 343 69.4
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 1.6e-123 447.2 381 64.0
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 1.6e-123 447.2 370 65.7
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.7e-123 446.4 381 63.3
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 3.5e-123 446.0 380 64.5
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 5.9e-123 445.3 380 64.2
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 5.9e-123 445.3 383 63.7
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.3e-122 444.1 380 63.4
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 2.3e-122 443.4 342 68.4
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 3.8e-122 442.6 380 64.2
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 5.0e-122 442.2 372 65.3
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 6.6e-122 441.8 381 63.8
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 6.6e-122 441.8 379 63.1
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 8.6e-122 441.4 379 65.2
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 8.6e-122 441.4 433 58.9
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 8.6e-122 441.4 380 64.7
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 8.6e-122 441.4 375 62.7
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 1.9e-121 440.3 382 63.1
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.9e-121 440.3 380 63.7
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 1.9e-121 440.3 380 62.6
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 3.3e-121 439.5 380 63.4
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 4.3e-121 439.1 387 63.0
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 5.6e-121 438.7 380 63.4
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 5.6e-121 438.7 380 63.9
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 2.8e-120 436.4 381 61.9
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 3.6e-120 436.0 380 62.6
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 1.4e-119 434.1 436 57.6
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 1.4e-119 434.1 451 55.9
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.8e-119 433.7 375 64.3
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 3.0e-119 433.0 344 67.7
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 5.2e-119 432.2 371 62.5
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 5.2e-119 432.2 376 64.6
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 8.9e-119 431.4 376 65.4
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.5e-118 430.6 386 61.7
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 1.5e-118 430.6 374 63.4
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 3.4e-118 429.5 383 61.9
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 5.8e-118 428.7 374 62.0
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 7.5e-118 428.3 380 62.1
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 7.5e-118 428.3 380 61.8
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 9.8e-118 427.9 340 65.6
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.7e-117 427.2 377 63.1
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 2.2e-117 426.8 376 62.8
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 2.2e-117 426.8 380 61.6
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 2.9e-117 426.4 355 63.9
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 2.9e-117 426.4 380 63.2
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 2.9e-117 426.4 378 61.6
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 2.9e-117 426.4 381 62.7
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 4.9e-117 425.6 347 65.7
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 6.4e-117 425.2 344 66.0
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 8.3e-117 424.9 347 65.7
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 8.3e-117 424.9 372 62.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 2.4e-116 423.3 335 69.3
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 4.1e-116 422.5 374 61.8
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 7.0e-116 421.8 368 62.2
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 9.2e-116 421.4 385 62.1
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 2.7e-115 419.9 385 60.3
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 2.7e-115 419.9 328 66.5
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.7e-115 419.9 342 65.5
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 4.6e-115 419.1 360 64.4
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 6.0e-115 418.7 374 62.3
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.0e-114 417.9 349 64.5
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 3.0e-114 416.4 377 61.0
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 3.9e-114 416.0 351 64.4
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 1.9e-113 413.7 306 73.5
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 3.3e-113 412.9 339 66.4
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 2.8e-112 409.8 374 59.9
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.4e-110 402.5 363 63.4
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 4.9e-109 399.1 351 61.8
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 5.1e-106 389.0 374 58.8
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 2.5e-105 386.7 381 57.2
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 1.5e-102 377.5 294 68.7
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 3.0e-90 336.7 372 55.1
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 3.9e-90 336.3 344 57.0
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 9.0e-87 325.1 244 70.9
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 1.0e-82 311.6 260 63.8
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 3.9e-82 309.7 365 50.1
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 6.6e-82 308.9 381 49.3
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 2.5e-81 307.0 370 48.9
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.8e-72 276.2 211 70.6
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 3.0e-66 256.9 204 66.2
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 6.7e-66 255.8 361 44.9
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 5.3e-63 246.1 213 65.3
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 5.3e-63 246.1 343 44.6
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 6.5e-61 239.2 349 39.3
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 5.1e-58 229.6 350 42.0
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 7.7e-54 215.7 213 55.4
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 2.2e-45 187.6 178 61.8
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 3.7e-40 170.2 185 54.1
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 3.1e-31 140.6 247 38.5
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 3.0e-26 124.0 81 72.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 3.7e-24 117.1 95 66.3
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 1.2e-22 112.1 102 62.7
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 2.3e-18 97.8 355 27.0
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 4.0e-18 97.1 104 53.8
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 6.3e-16 89.7 352 27.6
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.8e-15 88.2 160 41.9
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 1.3e-13 82.0 113 46.9
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 4.9e-08 63.5 78 51.3
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 3.5e-06 57.4 35 71.4


User provided reference genes

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