Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 8.7e-168 593.6 303 100.0
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 3.5e-161 571.6 303 97.0
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.6e-134 483.0 303 80.2
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 3.7e-134 481.9 300 78.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 4.8e-134 481.5 303 77.9
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.1e-133 480.3 301 77.4
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 3.1e-133 478.8 303 76.9
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 9.1e-133 477.2 299 77.6
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.0e-131 473.8 301 76.1
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.3e-131 473.4 302 75.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 3.8e-131 471.9 303 73.9
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 3.8e-131 471.9 303 73.9
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.1e-130 470.3 299 75.9
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.4e-130 469.9 303 73.6
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 4.2e-130 468.4 300 75.7
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 5.5e-130 468.0 301 74.8
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.6e-129 466.5 300 75.3
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.6e-129 466.5 302 74.5
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.6e-129 466.5 300 75.3
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.1e-129 466.1 302 75.8
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.7e-129 465.7 301 74.4
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.6e-129 465.3 303 75.2
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 3.6e-129 465.3 303 75.2
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 4.6e-129 464.9 299 74.9
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 6.1e-129 464.5 299 75.3
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.0e-128 463.8 302 74.2
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.0e-128 463.8 302 74.2
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.8e-128 463.0 300 74.3
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.8e-128 463.0 305 78.4
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.3e-128 462.6 299 74.9
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 3.0e-128 462.2 299 74.6
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 3.9e-128 461.8 300 74.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 3.9e-128 461.8 299 74.6
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.1e-127 460.3 300 74.0
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.5e-127 459.9 299 74.6
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.0e-127 459.5 300 72.7
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 2.6e-127 459.1 301 73.4
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 3.3e-127 458.8 303 73.6
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 4.4e-127 458.4 300 72.7
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 5.7e-127 458.0 301 72.4
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 7.4e-127 457.6 299 74.2
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 9.7e-127 457.2 299 73.9
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.2e-126 456.1 300 71.7
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.2e-126 456.1 300 71.7
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 2.2e-126 456.1 300 73.7
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.2e-126 456.1 300 73.3
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.8e-126 455.7 300 73.0
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.8e-126 454.9 299 73.2
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.3e-126 454.5 301 72.8
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 6.3e-126 454.5 301 73.1
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 6.3e-126 454.5 300 71.3
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 4.1e-125 451.8 301 72.1
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.3e-125 451.4 299 72.6
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 6.9e-125 451.1 299 72.6
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 74.0
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 74.0
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.5e-124 449.9 300 74.0
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 2.0e-124 449.5 300 72.3
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 7.7e-124 447.6 301 71.1
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.4e-122 443.4 300 71.7
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 4.2e-122 441.8 311 71.1
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.5e-122 441.4 292 71.9
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 7.2e-122 441.0 301 70.8
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.0e-120 437.2 303 71.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.0e-120 437.2 293 74.7
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 3.3e-119 432.2 303 71.0
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 4.4e-119 431.8 301 70.1
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 5.3e-117 424.9 287 71.1
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 9.1e-117 424.1 300 70.3
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 9.1e-117 424.1 301 69.4
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 2.0e-116 422.9 300 70.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.6e-116 422.5 300 70.3
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 2.6e-116 422.5 300 69.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 7.7e-116 421.0 300 70.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 7.7e-116 421.0 300 70.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 7.7e-116 421.0 300 68.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 7.7e-116 421.0 300 69.3
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 1.3e-115 420.2 300 68.7
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.7e-115 419.9 300 69.3
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 1.7e-115 419.9 301 67.8
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.2e-115 419.5 304 67.4
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.8e-115 418.7 302 67.2
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 5.0e-115 418.3 300 68.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 6.5e-115 417.9 300 69.3
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 1.1e-114 417.2 300 68.0
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.1e-114 417.2 302 68.5
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 1.5e-114 416.8 300 70.0
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 1.5e-114 416.8 303 68.0
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.9e-114 416.4 275 74.2
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 2.5e-114 416.0 300 68.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 2.5e-114 416.0 300 68.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 2.5e-114 416.0 300 68.0
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 9.4e-114 414.1 300 68.0
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.6e-113 413.3 303 68.0
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.4e-112 410.2 304 66.8
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.2e-107 392.9 249 76.7
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.2e-105 387.1 249 74.3
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.8e-101 373.2 299 62.2
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.6e-100 370.2 302 61.6
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 1.2e-97 360.5 304 57.9
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.8e-97 359.4 249 70.7
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.5e-95 353.6 255 69.0
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.2e-94 349.7 225 74.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 6.3e-94 348.2 259 67.2
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 9.2e-93 344.4 219 76.3
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 3.5e-92 342.4 225 72.9
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.7e-91 340.1 215 75.3
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 3.3e-90 335.9 237 67.9
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.3e-90 335.5 218 72.9
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.3e-90 335.5 222 71.2
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 2.4e-85 319.7 303 57.8
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.3e-83 313.9 277 56.3
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 8.9e-80 301.2 343 49.0
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 3.7e-70 269.2 172 72.7
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.8e-57 226.5 312 42.0
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.3e-46 191.0 165 58.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 3.5e-44 183.0 140 66.4
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 3.1e-40 169.9 343 33.2
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.0e-39 167.2 105 75.2
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 2.0e-39 167.2 303 37.0
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 3.8e-38 162.9 177 48.6
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.7e-30 137.5 88 70.5
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 3.5e-28 129.8 89 68.5
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.9e-26 124.0 86 70.9
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 4.8e-25 119.4 352 32.4
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 6.3e-25 119.0 91 64.8
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 9.0e-24 115.2 72 70.8
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.6e-23 113.6 142 47.2
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 8.2e-17 92.0 60 63.3
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.2e-15 88.2 64 68.8
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 4.8e-09 66.2 39 74.4


User provided reference genes

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