Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1656 Papaver somniferum HOM05D004907 ORTHO05D005707 9.1e-237 823.2 409 100.0
PSO170G6868 Papaver somniferum HOM05D004907 ORTHO05D005707 3.7e-137 492.3 378 63.2
PSO441G0001 Papaver somniferum HOM05D004907 ORTHO05D005707 3.7e-137 492.3 378 63.2
PSO144G0054 Papaver somniferum HOM05D004907 ORTHO05D005707 2.0e-135 486.5 384 62.8
PSO782G1891 Papaver somniferum HOM05D004907 ORTHO05D005707 2.0e-135 486.5 377 63.7
PSO063G4965 Papaver somniferum HOM05D004907 ORTHO05D005707 2.2e-129 466.5 376 60.4
TAR374G1110 Trochodendron aralioides HOM05D004907 ORTHO05D005707 4.7e-108 395.6 376 52.9
PSO357G0455 Papaver somniferum HOM05D004907 ORTHO05D005707 1.4e-91 340.9 224 74.1
Nn4g22709 Nelumbo nucifera HOM05D004907 ORTHO05D005707 7.5e-90 335.1 393 44.3
Aqoxy3G02876 Aquilegia oxysepala HOM05D004907 ORTHO05D005707 2.2e-89 333.6 372 45.4
Lsat_1_v5_gn_3_28580 Lactuca sativa HOM05D004907 ORTHO05D005707 4.1e-88 329.3 358 45.5
Lj6P808T27 Lonicera japonica HOM05D004907 ORTHO05D005707 4.1e-88 329.3 359 46.8
PGSC0003DMG400013488 Solanum tuberosum HOM05D004907 ORTHO05D005707 1.7e-86 323.9 374 43.6
Hma1.2p1_0160F.1_g071120 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 2.3e-86 323.6 378 43.4
Nitab4.5_0000338g0040 Nicotiana tabacum HOM05D004907 ORTHO05D005707 2.9e-86 323.2 374 42.5
Duzib268G1138 Durio zibethinus HOM05D004907 ORTHO05D005707 3.9e-86 322.8 369 43.9
Haze_12215 Corylus avellana HOM05D004907 ORTHO05D005707 6.6e-86 322.0 357 43.1
Nitab4.5_0015209g0010 Nicotiana tabacum HOM05D004907 ORTHO05D005707 2.5e-85 320.1 374 42.0
CAN.G728.4 Capsicum annuum HOM05D004907 ORTHO05D005707 3.3e-85 319.7 373 42.4
CiPaw.05G186900 Carya illinoinensis HOM05D004907 ORTHO05D005707 4.3e-85 319.3 377 42.2
Cfa009181 Carpinus fangiana HOM05D004907 ORTHO05D005707 5.6e-85 318.9 367 42.5
Thecc.02G254700 Theobroma cacao HOM05D004907 ORTHO05D005707 7.3e-85 318.5 379 43.5
Sopen05g001160 Solanum pennellii HOM05D004907 ORTHO05D005707 2.8e-84 316.6 372 43.8
Gohir.D02G160600 Gossypium hirsutum HOM05D004907 ORTHO05D005707 4.7e-84 315.8 375 43.5
Hma1.2p1_0223F.1_g094330 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 1.0e-83 314.7 382 42.9
Solyc05g005150.1 Solanum lycopersicum HOM05D004907 ORTHO05D005707 4.0e-83 312.8 372 43.0
CSS0001528 Camellia sinensis var. sinensis HOM05D004907 ORTHO05D005707 6.8e-83 312.0 373 42.4
AUR62014077 Chenopodium quinoa HOM05D004907 ORTHO05D005707 6.8e-83 312.0 361 42.9
Sc04g0009300 Simmondsia chinensis HOM05D004907 ORTHO05D005707 2.6e-82 310.1 375 42.1
Duzib268G1696 Durio zibethinus HOM05D004907 ORTHO05D005707 9.8e-82 308.1 375 42.4
MD16G1096500 Malus domestica HOM05D004907 ORTHO05D005707 1.3e-81 307.8 381 44.1
QL03p059196 Quercus lobata HOM05D004907 ORTHO05D005707 1.3e-81 307.8 374 40.9
PGR119G0630 Punica granatum HOM05D004907 ORTHO05D005707 2.2e-81 307.0 370 42.2
Eucgr.H02549 Eucalyptus grandis HOM05D004907 ORTHO05D005707 2.9e-81 306.6 374 42.0
Prupe.1G249900 Prunus persica HOM05D004907 ORTHO05D005707 1.9e-80 303.9 377 44.3
Eucgr.H02548 Eucalyptus grandis HOM05D004907 ORTHO05D005707 2.4e-80 303.5 375 42.4
Manes.13G027600 Manihot esculenta HOM05D004907 ORTHO05D005707 3.2e-80 303.1 396 39.9
Lsat_1_v5_gn_8_154601 Lactuca sativa HOM05D004907 ORTHO05D005707 9.2e-80 301.6 356 41.3
Cc11_g15390 Coffea canephora HOM05D004907 ORTHO05D005707 1.2e-79 301.2 379 42.2
DCAR_007072 Daucus carota HOM05D004907 ORTHO05D005707 3.5e-79 299.7 366 41.5
FAN07G1203 Fragaria x ananassa HOM05D004907 ORTHO05D005707 3.5e-79 299.7 369 41.7
AUR62005416 Chenopodium quinoa HOM05D004907 ORTHO05D005707 4.6e-79 299.3 360 43.6
FAN12G3344 Fragaria x ananassa HOM05D004907 ORTHO05D005707 6.0e-79 298.9 389 41.1
Rhsim12G0042700 Rhododendron simsii HOM05D004907 ORTHO05D005707 6.0e-79 298.9 380 40.5
RcHm_v2.0_Chr4g0441991 Rosa chinensis HOM05D004907 ORTHO05D005707 1.3e-78 297.7 366 41.3
Gohir.A03G137500 Gossypium hirsutum HOM05D004907 ORTHO05D005707 3.0e-78 296.6 375 41.6
Gohir.A05G313700 Gossypium hirsutum HOM05D004907 ORTHO05D005707 3.0e-78 296.6 381 40.9
Psat5g210760 Pisum sativum HOM05D004907 ORTHO05D005707 3.0e-78 296.6 376 42.6
FvH4_4g32970 Fragaria vesca HOM05D004907 ORTHO05D005707 3.9e-78 296.2 389 40.6
Ciclev10031561m.g Citrus clementina HOM05D004907 ORTHO05D005707 5.0e-78 295.8 371 41.8
Gohir.D01G149900 Gossypium hirsutum HOM05D004907 ORTHO05D005707 1.5e-77 294.3 387 40.6
CANSAT01G1025 Cannabis sativa HOM05D004907 ORTHO05D005707 1.9e-77 293.9 362 41.2
Gorai.005G180700 Gossypium raimondii HOM05D004907 ORTHO05D005707 2.5e-77 293.5 375 41.1
Cfa009182 Carpinus fangiana HOM05D004907 ORTHO05D005707 4.3e-77 292.7 372 38.2
Glyma.08G284600 Glycine max HOM05D004907 ORTHO05D005707 9.5e-77 291.6 370 41.1
FAN17G0584 Fragaria x ananassa HOM05D004907 ORTHO05D005707 1.6e-76 290.8 365 41.6
HanXRQChr06g0173591 Helianthus annuus HOM05D004907 ORTHO05D005707 2.1e-76 290.4 376 40.2
CiPaw.06G069900 Carya illinoinensis HOM05D004907 ORTHO05D005707 3.6e-76 289.7 393 39.9
Gorai.002G186000 Gossypium raimondii HOM05D004907 ORTHO05D005707 3.6e-76 289.7 387 40.1
FAN22G1867 Fragaria x ananassa HOM05D004907 ORTHO05D005707 4.7e-76 289.3 387 40.3
Atru.chr11.2072 Acer truncatum HOM05D004907 ORTHO05D005707 1.8e-75 287.3 364 42.3
MD13G1095300 Malus domestica HOM05D004907 ORTHO05D005707 1.8e-75 287.3 365 41.4
Oeu001729.1 Olea europaea HOM05D004907 ORTHO05D005707 3.1e-75 286.6 365 41.1
MD16G1096400 Malus domestica HOM05D004907 ORTHO05D005707 2.0e-74 283.9 359 40.9
Lj4g0000696 Lotus japonicus HOM05D004907 ORTHO05D005707 4.4e-74 282.7 377 39.3
Phvul.003G062300 Phaseolus vulgaris HOM05D004907 ORTHO05D005707 4.4e-74 282.7 395 39.5
CDE06G1150 Ceratophyllum demersum HOM05D004907 ORTHO05D005707 5.8e-74 282.3 340 42.6
CsaV3_5G031400 Cucumis sativus L. HOM05D004907 ORTHO05D005707 5.8e-74 282.3 368 39.1
TPR.G24774 Trifolium pratense HOM05D004907 ORTHO05D005707 5.8e-74 282.3 372 39.2
Potri.010G042900 Populus trichocarpa HOM05D004907 ORTHO05D005707 9.8e-74 281.6 389 41.4
Sabra10G0024600 Salix brachista HOM05D004907 ORTHO05D005707 1.7e-73 280.8 390 40.8
TWI36G0219 Tripterygium wilfordii HOM05D004907 ORTHO05D005707 1.7e-73 280.8 390 40.8
Lj2g0022644 Lotus japonicus HOM05D004907 ORTHO05D005707 3.7e-73 279.6 363 40.5
ClCG05G025500 Citrullus lanatus HOM05D004907 ORTHO05D005707 8.3e-73 278.5 375 38.4
Rhsim12G0113900 Rhododendron simsii HOM05D004907 ORTHO05D005707 8.3e-73 278.5 373 40.2
Glyma.01G028800 Glycine max HOM05D004907 ORTHO05D005707 1.9e-72 277.3 374 40.6
Glyma.02G036400 Glycine max HOM05D004907 ORTHO05D005707 3.2e-72 276.6 375 40.0
MELO3C011980.2 Cucumis melo HOM05D004907 ORTHO05D005707 9.2e-72 275.0 368 38.3
Gorai.009G337200 Gossypium raimondii HOM05D004907 ORTHO05D005707 9.2e-72 275.0 381 40.2
MSTRG.7910 Avicennia marina HOM05D004907 ORTHO05D005707 2.1e-71 273.9 369 40.9
Psat2g106360 Pisum sativum HOM05D004907 ORTHO05D005707 6.0e-71 272.3 363 39.9
Glyma.18G141000 Glycine max HOM05D004907 ORTHO05D005707 7.8e-71 271.9 371 38.8
Lalb_Chr05g0216711 Lupinus albus HOM05D004907 ORTHO05D005707 1.3e-70 271.2 362 38.7
Medtr8g069800 Medicago truncatula HOM05D004907 ORTHO05D005707 1.6e-68 264.2 363 38.6
Actinidia27794 Actinidia chinensis HOM05D004907 ORTHO05D005707 1.4e-67 261.2 367 38.1
Ca_03137_v3 Cicer arietinum L. HOM05D004907 ORTHO05D005707 1.8e-67 260.8 367 38.7
Dinv15270 Davidia involucrata HOM05D004907 ORTHO05D005707 2.3e-67 260.4 273 46.2
Gohir.A01G160100 Gossypium hirsutum HOM05D004907 ORTHO05D005707 3.1e-67 260.0 323 42.4
A09p41240 Brassica napus HOM05D004907 ORTHO05D005707 5.2e-67 259.2 369 38.8
BraA09t39619Z Brassica rapa HOM05D004907 ORTHO05D005707 5.2e-67 259.2 369 38.8
Hund25371 Selenicereus undatus HOM05D004907 ORTHO05D005707 6.8e-67 258.8 366 38.5
Thecc.02G254800 Theobroma cacao HOM05D004907 ORTHO05D005707 6.8e-67 258.8 377 37.9
VMungo1215G1811 Vigna mungo HOM05D004907 ORTHO05D005707 2.6e-66 256.9 372 39.8
Medtr5g043750 Medicago truncatula HOM05D004907 ORTHO05D005707 3.4e-66 256.5 362 39.5
PGR102G3060 Punica granatum HOM05D004907 ORTHO05D005707 4.4e-66 256.1 384 39.1
AT1G23390 Arabidopsis thaliana HOM05D004907 ORTHO05D005707 9.9e-66 255.0 379 38.5
Oeu056417.1 Olea europaea HOM05D004907 ORTHO05D005707 9.9e-66 255.0 376 38.0
THA.LOC104822976 Tarenaya hassleriana HOM05D004907 ORTHO05D005707 2.9e-65 253.4 372 39.8
Thhalv10007835m.g Eutrema salsugineum HOM05D004907 ORTHO05D005707 4.9e-65 252.7 372 36.3
C05p22690 Brassica napus HOM05D004907 ORTHO05D005707 8.3e-65 251.9 369 38.2
BolC5t30967H Brassica oleracea HOM05D004907 ORTHO05D005707 2.4e-64 250.4 369 37.9
Medtr5g033880 Medicago truncatula HOM05D004907 ORTHO05D005707 2.4e-64 250.4 381 37.3
GSVIVG01013786001 Vitis vinifera HOM05D004907 ORTHO05D005707 3.2e-64 250.0 272 43.0
MSTRG.2405 Avicennia marina HOM05D004907 ORTHO05D005707 5.4e-64 249.2 375 38.7
SalBow3G2985 Salvia bowleyana HOM05D004907 ORTHO05D005707 5.4e-64 249.2 371 38.3
Haze_12216 Corylus avellana HOM05D004907 ORTHO05D005707 7.1e-64 248.8 369 34.7
BcaC05g26256 Brassica carinata HOM05D004907 ORTHO05D005707 9.2e-64 248.4 367 37.9
Migut.L01466 Erythranthe guttata HOM05D004907 ORTHO05D005707 1.3e-62 244.6 376 37.2
Aa31LG7G7420 Aethionema arabicum HOM05D004907 ORTHO05D005707 1.1e-61 241.5 364 36.3
Oeu056415.1 Olea europaea HOM05D004907 ORTHO05D005707 1.1e-61 241.5 378 36.0
CARHR023830 Cardamine hirsuta HOM05D004907 ORTHO05D005707 1.5e-61 241.1 379 36.1
Sp1g20830 Schrenkiella parvula HOM05D004907 ORTHO05D005707 2.5e-61 240.4 373 37.3
AL1G37180 Arabidopsis lyrata HOM05D004907 ORTHO05D005707 4.3e-61 239.6 377 36.9
Sed0025966 Sechium edule HOM05D002061 ORTHO05D005707 4.3e-61 239.6 372 36.6
Carub.0001s2297 Capsella rubella HOM05D004907 ORTHO05D005707 5.6e-61 239.2 375 37.1
SalBow2G1155 Salvia bowleyana HOM05D004907 ORTHO05D005707 9.6e-61 238.4 367 36.8
PSO478G2945 Papaver somniferum HOM05D004907 ORTHO05D005707 1.2e-60 238.0 192 61.5
BcaB07g32334 Brassica carinata HOM05D004907 ORTHO05D005707 1.6e-60 237.7 370 35.9
Peaxi162Scf00158g00003 Petunia axillaris HOM05D004907 ORTHO05D005707 2.1e-60 237.3 271 42.8
Ah.03g132850 Amaranthus hybridus HOM05D000168 ORTHO05D000811 4.7e-60 236.1 290 40.0
ATR1091G111 Amborella trichopoda HOM05D004907 ORTHO05D005707 6.2e-60 235.7 370 37.6
Oeu055460.1 Olea europaea HOM05D004907 ORTHO05D005707 1.1e-59 235.0 383 38.4
COL.COLO4_24215 Corchorus olitorius HOM05D004907 ORTHO05D005707 2.0e-58 230.7 270 43.3
ClCG08G017860 Citrullus lanatus HOM05D002061 ORTHO05D005707 1.7e-57 227.6 404 36.9
Sed0027759 Sechium edule HOM05D004907 ORTHO05D005707 2.9e-57 226.9 368 34.8
Phvul.002G064500 Phaseolus vulgaris HOM05D004907 ORTHO05D005707 4.9e-57 226.1 250 46.4
Oeu056728.1 Olea europaea HOM05D004907 ORTHO05D005707 3.3e-53 213.4 286 41.6
SGA_v2.0_scaffold63G21708 Striga asiatica HOM05D004907 ORTHO05D005707 8.4e-49 198.7 370 35.1
Gohir.D05G315200 Gossypium hirsutum HOM05D004907 ORTHO05D005707 1.1e-48 198.4 226 44.2
Actinidia08149 Actinidia chinensis HOM05D004907 ORTHO05D005707 1.9e-45 187.6 263 39.5
Lalb_Chr09g0326261 Lupinus albus HOM05D004907 ORTHO05D005707 3.1e-43 180.3 362 30.4
EL10Ac6g13709 Beta vulgaris HOM05D004907 ORTHO05D005707 1.2e-42 178.3 216 40.7
Nn3g16812 Nelumbo nucifera HOM05D004907 ORTHO05D005707 4.0e-35 153.3 200 42.0
Zm00001eb155550 Zea mays HOM05D004907 ORTHO05D005707 1.8e-30 137.9 387 28.4
HPP92_008048 Vanilla planifolia HOM05D004907 ORTHO05D005707 1.9e-29 134.4 356 29.2
Os09g0292900 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 9.6e-29 132.1 394 28.2
vmacro14766 Vaccinium macrocarpon HOM05D007853 ORTHO05D009873 1.8e-27 127.9 375 27.7
COL.COLO4_24217 Corchorus olitorius HOM05D004907 ORTHO05D005707 4.5e-26 123.2 205 33.2
MD13G1280300 Malus domestica HOM05D004907 ORTHO05D005707 1.7e-25 121.3 189 33.9
Lj1C83T5 Lonicera japonica HOM05D007853 ORTHO05D009873 5.0e-25 119.8 345 29.6
Hma1.2p1_1061F.1_g253350 Hydrangea macrophylla HOM05D007853 ORTHO05D009873 6.5e-25 119.4 375 29.9
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.2e-23 115.2 326 31.3
CiPaw.04G106700 Carya illinoinensis HOM05D007853 ORTHO05D009873 2.7e-23 114.0 352 28.4
Lalb_Chr03g0041891 Lupinus albus HOM05D007853 ORTHO05D009873 3.5e-23 113.6 347 28.0
TWI18G0437 Tripterygium wilfordii HOM05D007853 ORTHO05D009873 6.1e-23 112.8 370 26.8
Glyma.18G173200 Glycine max HOM05D007853 ORTHO05D009873 3.9e-22 110.2 389 27.5
Cfa002555 Carpinus fangiana HOM05D007853 ORTHO05D009873 5.1e-22 109.8 349 27.5
Phvul.008G123400 Phaseolus vulgaris HOM05D007853 ORTHO05D009873 8.7e-22 109.0 353 28.0
Gohir.A11G136300 Gossypium hirsutum HOM05D007853 ORTHO05D009873 3.3e-21 107.1 346 28.0
Glyma.08G356100 Glycine max HOM05D007853 ORTHO05D009873 4.3e-21 106.7 362 27.6
Mapoly0119s0024 Marchantia polymorpha HOM05D007853 ORTHO05D009873 9.7e-21 105.5 285 27.0
VMungo1383G0232 Vigna mungo HOM05D007853 ORTHO05D009873 9.7e-21 105.5 381 27.6
Os01g0704300 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 1.3e-20 105.1 264 32.2
Psat3g143800 Pisum sativum HOM05D007853 ORTHO05D009873 1.3e-20 105.1 292 28.1
Gohir.D11G142600 Gossypium hirsutum HOM05D007853 ORTHO05D009873 2.2e-20 104.4 345 27.5
Gorai.007G152900 Gossypium raimondii HOM05D007853 ORTHO05D009873 2.8e-20 104.0 346 28.3
HanXRQChr01g0014671 Helianthus annuus HOM05D007853 ORTHO05D009873 2.8e-20 104.0 374 24.3
SEGI_08843 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 6.3e-20 102.8 262 27.9
Lsat_1_v5_gn_5_179800 Lactuca sativa HOM05D007853 ORTHO05D009873 1.1e-19 102.1 341 27.0
CiPaw.03G151300 Carya illinoinensis HOM05D007853 ORTHO05D009873 1.8e-19 101.3 349 27.8
ATR0787G102 Amborella trichopoda HOM05D007853 ORTHO05D009873 2.4e-19 100.9 327 27.8
Mapoly0119s0021 Marchantia polymorpha HOM05D007853 ORTHO05D009873 2.0e-18 97.8 286 25.9
Cfa009183 Carpinus fangiana HOM05D004907 ORTHO05D005707 2.2e-17 94.4 130 34.6
Thhalv10002571m.g Eutrema salsugineum HOM05D007853 ORTHO05D009873 5.0e-17 93.2 348 25.6
Pp3c2_14180 Physcomitrium patens HOM05D007853 ORTHO05D009873 8.5e-17 92.4 334 25.4
Os02g0465600 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 1.9e-16 91.3 218 28.0
TPR.G21504 Trifolium pratense HOM05D004907 ORTHO05D005707 2.5e-16 90.9 154 33.8
Nn2g13937 Nelumbo nucifera HOM05D004907 ORTHO05D005707 7.2e-16 89.4 93 46.2
Haze_24777 Corylus avellana HOM05D007853 ORTHO05D009873 1.4e-14 85.1 273 27.5
CARHR101120 Cardamine hirsuta HOM05D007853 ORTHO05D009873 3.0e-14 84.0 288 27.4
unitig_8.g2924 Utricularia gibba HOM05D004907 ORTHO05D005707 1.5e-13 81.6 118 39.8
Nn2g13938 Nelumbo nucifera HOM05D004907 ORTHO05D005707 4.1e-11 73.6 94 37.2
unitig_8.g2923 Utricularia gibba HOM05D004907 ORTHO05D005707 1.5e-10 71.6 92 39.1
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 2.5e-08 64.3 291 23.0
SEGI_19660 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 2.7e-07 60.8 307 28.0
SEGI_20973 Sequoiadendron giganteum HOM05D007753 ORTHO05D009385 2.7e-07 60.8 307 28.0
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 7.9e-07 59.3 346 24.0
SEGI_19761 Sequoiadendron giganteum HOM05D041656 ORTHO05D009873 1.0e-06 58.9 57 49.1
SEGI_28857 Sequoiadendron giganteum HOM05D041656 ORTHO05D009873 1.0e-06 58.9 57 49.1


User provided reference genes

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