Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1523 Papaver somniferum HOM05D031015 ORTHO05D002188 0.0e+00 1311.6 923 100.0
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 0.0e+00 1106.7 1017 79.2
PSO135G0315 Papaver somniferum HOM05D031015 ORTHO05D002188 3.5e-305 1051.6 1017 73.0
PSO170G1432 Papaver somniferum HOM05D031015 ORTHO05D002188 2.5e-133 480.7 457 79.2
TAR374G1003 Trochodendron aralioides HOM05D002129 ORTHO05D002188 1.6e-26 125.9 287 38.0
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 3.6e-23 114.8 718 26.6
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 2.3e-22 112.1 710 27.6
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 1.2e-21 109.8 723 24.5
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 8.3e-20 103.6 296 30.1
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 1.1e-19 103.2 256 41.4
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 1.1e-19 103.2 298 28.9
FvH4_5g04071 Fragaria vesca HOM05D002129 ORTHO05D002188 1.6e-18 99.4 736 22.7
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 5.9e-18 97.4 726 25.9
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 1.3e-17 96.3 357 31.9
FAN04G1467 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.8e-17 94.7 736 24.7
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 1.5e-16 92.8 227 32.2
MBI07_g09921_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 2.5e-16 92.0 291 28.5
FAN18G1710 Fragaria x ananassa HOM05D002129 ORTHO05D002188 9.5e-16 90.1 975 20.9
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 1.6e-15 89.4 310 30.3
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 3.6e-15 88.2 222 31.5
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 3.6e-15 88.2 301 34.2
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 2.6e-13 82.0 190 37.4
Aqoxy5G04152 Aquilegia oxysepala HOM05D002129 ORTHO05D002188 4.4e-13 81.3 294 35.0
Atru.chr9.2043 Acer truncatum HOM05D002129 ORTHO05D002188 5.8e-13 80.9 560 24.6
Ca_17494_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 1.3e-12 79.7 577 27.0
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.3e-12 79.7 201 32.8
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 1.3e-12 79.7 701 24.4
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 1.7e-12 79.3 735 27.3
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 2.2e-12 79.0 450 25.8
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 2.9e-12 78.6 806 23.7
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 2.9e-12 78.6 203 43.8
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 3.7e-12 78.2 594 22.7
Medtr8g099290 Medicago truncatula HOM05D002129 ORTHO05D002188 4.9e-12 77.8 694 25.2
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 6.4e-12 77.4 270 28.9
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 6.4e-12 77.4 197 35.0
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 8.3e-12 77.0 646 24.3
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 8.3e-12 77.0 620 26.3
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 1.4e-11 76.3 764 22.3
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 2.4e-11 75.5 323 28.2
Migut.A00679 Erythranthe guttata HOM05D002129 ORTHO05D002188 4.1e-11 74.7 298 27.9
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 4.1e-11 74.7 195 32.3
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 5.4e-11 74.3 307 32.9
Cc08_g15770 Coffea canephora HOM05D002129 ORTHO05D002188 1.2e-10 73.2 646 25.7
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 1.6e-10 72.8 627 24.7
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 2.7e-10 72.0 300 25.0
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.7e-10 72.0 318 27.4
Thecc.03G293100 Theobroma cacao HOM05D002129 ORTHO05D002188 2.7e-10 72.0 652 26.7
RcHm_v2.0_Chr7g0195441 Rosa chinensis HOM05D002129 ORTHO05D002188 4.6e-10 71.2 435 23.4
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 6.0e-10 70.9 307 26.7
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 6.0e-10 70.9 254 29.1
PGSC0003DMG400004988 Solanum tuberosum HOM05D002129 ORTHO05D002188 6.0e-10 70.9 626 22.5
MSTRG.1816 Avicennia marina HOM05D002129 ORTHO05D002188 7.8e-10 70.5 294 32.0
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 7.8e-10 70.5 949 26.6
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 7.8e-10 70.5 314 27.7
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 1.7e-09 69.3 183 32.2
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.3e-09 68.9 326 27.6
Lalb_Chr05g0224251 Lupinus albus HOM05D002129 ORTHO05D002188 2.3e-09 68.9 451 22.6
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 2.3e-09 68.9 289 30.4
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 3.0e-09 68.6 188 31.4
SGA_v2.0_scaffold173G39089 Striga asiatica HOM05D002129 ORTHO05D002188 3.0e-09 68.6 257 29.6
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 3.9e-09 68.2 677 24.1
FAN18G4347 Fragaria x ananassa HOM05D002129 ORTHO05D002188 8.6e-09 67.0 426 23.9
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 8.6e-09 67.0 309 28.8
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 1.1e-08 66.6 242 27.7
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 1.1e-08 66.6 243 29.6
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.5e-08 65.5 264 29.5
Lj8P210T83 Lonicera japonica HOM05D002129 ORTHO05D002188 2.5e-08 65.5 280 28.6
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.5e-08 65.5 194 30.9
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.3e-08 65.1 584 22.8
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 3.3e-08 65.1 309 28.5
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.3e-08 64.7 264 29.5
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 4.3e-08 64.7 724 25.4
TAR374G0015 Trochodendron aralioides HOM05D002129 ORTHO05D002188 4.3e-08 64.7 159 34.0
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 5.6e-08 64.3 523 22.2
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 7.3e-08 63.9 679 24.9
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 7.3e-08 63.9 767 24.4
TPR.G3398 Trifolium pratense HOM05D002129 ORTHO05D002188 7.3e-08 63.9 654 20.8
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 9.5e-08 63.5 1088 29.8
Psat7g027480 Pisum sativum HOM05D002129 ORTHO05D002188 9.5e-08 63.5 366 26.0
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 9.5e-08 63.5 250 34.4
Solyc08g008260.2 Solanum lycopersicum HOM05D002129 ORTHO05D002188 9.5e-08 63.5 214 30.4
Sopen08g004110 Solanum pennellii HOM05D002129 ORTHO05D002188 9.5e-08 63.5 214 29.9
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 9.5e-08 63.5 245 26.9
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.2e-07 63.2 205 31.2
CAN.G825.42 Capsicum annuum HOM05D002129 ORTHO05D002188 1.6e-07 62.8 235 27.2
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 1.6e-07 62.8 240 28.3
CSS0006894 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.1e-07 62.4 263 28.5
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 2.1e-07 62.4 205 30.7
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 2.8e-07 62.0 745 21.9
Lalb_Chr16g0376981 Lupinus albus HOM05D002129 ORTHO05D002188 2.8e-07 62.0 292 26.4
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 2.8e-07 62.0 185 28.1
Duzib205G1563 Durio zibethinus HOM05D002129 ORTHO05D002188 3.6e-07 61.6 443 24.8
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 3.6e-07 61.6 222 31.1
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 3.6e-07 61.6 308 25.6
vmacro11445 Vaccinium macrocarpon HOM05D001971 ORTHO05D003057 6.2e-07 60.8 356 27.0
unitig_748.g7418 Utricularia gibba HOM05D002129 ORTHO05D002188 8.0e-07 60.5 436 24.1
Potri.003G137300 Populus trichocarpa HOM05D002129 ORTHO05D002188 1.1e-06 60.1 717 22.0
Sabra03G0098800 Salix brachista HOM05D002129 ORTHO05D002188 1.1e-06 60.1 718 21.4
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 1.4e-06 59.7 970 22.7
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 1.8e-06 59.3 571 24.3
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 1.8e-06 59.3 242 26.9
Sed0023438 Sechium edule HOM05D002129 ORTHO05D002188 1.8e-06 59.3 273 24.2
Ciclev10024006m.g Citrus clementina HOM05D002129 ORTHO05D002188 2.3e-06 58.9 274 24.1
Migut.E01235 Erythranthe guttata HOM05D002129 ORTHO05D002188 3.1e-06 58.5 255 29.0
Sopen12g028580 Solanum pennellii HOM05D002129 ORTHO05D002188 3.1e-06 58.5 611 23.4
MSTRG.11936 Avicennia marina HOM05D002129 ORTHO05D002188 5.2e-06 57.8 334 26.6
EL10Ac5g12884 Beta vulgaris HOM05D002129 ORTHO05D002188 5.2e-06 57.8 228 25.9
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 5.2e-06 57.8 461 21.9
Ah.07g197190 Amaranthus hybridus HOM05D002129 ORTHO05D002188 6.8e-06 57.4 599 22.5
Duzib084G0891 Durio zibethinus HOM05D002129 ORTHO05D002188 6.8e-06 57.4 683 26.2
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 6.8e-06 57.4 215 25.1
PGSC0003DMG400005787 Solanum tuberosum HOM05D002129 ORTHO05D002188 6.8e-06 57.4 262 27.5
LjContig00312_ERROPOS870357g0010036 Lotus japonicus HOM05D002129 ORTHO05D002188 8.9e-06 57.0 324 25.0
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 8.9e-06 57.0 307 24.8
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 8.9e-06 57.0 793 24.0


User provided reference genes

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