Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0827 Papaver somniferum HOM05D002230 ORTHO05D002441 8.7e-51 203.4 104 100.0
PSO170G5913 Papaver somniferum HOM05D041942 ORTHO05D002441 2.8e-49 198.4 101 100.0
PSO725G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 9.0e-48 193.4 98 100.0
PSO339G6139 Papaver somniferum HOM05D041942 ORTHO05D002441 3.4e-39 164.9 81 100.0
PSO173G0158 Papaver somniferum HOM05D002230 ORTHO05D002441 7.2e-21 104.0 100 58.0
PSO173G0025 Papaver somniferum HOM05D002230 ORTHO05D002441 2.3e-19 99.0 97 57.7
PSO673G0035 Papaver somniferum HOM05D002230 ORTHO05D002441 5.1e-19 97.8 97 56.7
PSO170G2940 Papaver somniferum HOM05D002230 ORTHO05D002441 1.1e-16 90.1 98 52.0
PSO017G6172 Papaver somniferum HOM05D002230 ORTHO05D002441 5.3e-16 87.8 100 50.0
PSO541G3453 Papaver somniferum HOM05D002230 ORTHO05D002441 1.5e-15 86.3 99 50.5
PSO455G0070 Papaver somniferum HOM05D002230 ORTHO05D002441 2.0e-15 85.9 76 59.2
PSO541G3522 Papaver somniferum HOM05D002230 ORTHO05D002441 4.5e-15 84.7 102 52.0
PSO017G2413 Papaver somniferum HOM05D002230 ORTHO05D002441 5.9e-15 84.3 97 48.5
PSO421G0252 Papaver somniferum HOM05D002230 ORTHO05D002441 1.0e-14 83.6 100 49.0
AT1G06720 Arabidopsis thaliana HOM05D002230 ORTHO05D002441 1.2e-12 76.6 103 41.7
ClCG09G010650 Citrullus lanatus HOM05D002230 ORTHO05D002441 1.2e-12 76.6 111 41.4
MELO3C013185.2 Cucumis melo HOM05D002230 ORTHO05D002441 1.2e-12 76.6 111 41.4
CsaV3_7G021630 Cucumis sativus L. HOM05D002230 ORTHO05D002441 1.2e-12 76.6 111 41.4
PSO170G1574 Papaver somniferum HOM05D002230 ORTHO05D002441 1.2e-12 76.6 110 43.6
PSO782G1699 Papaver somniferum HOM05D002230 ORTHO05D002441 1.2e-12 76.6 110 43.6
BraA09t42020Z Brassica rapa HOM05D002230 ORTHO05D002441 1.6e-12 76.3 103 41.7
Thhalv10006612m.g Eutrema salsugineum HOM05D002230 ORTHO05D002441 1.6e-12 76.3 103 41.7
THA.LOC104815521 Tarenaya hassleriana HOM05D002230 ORTHO05D002441 1.6e-12 76.3 103 42.7
AL1G16730 Arabidopsis lyrata HOM05D002230 ORTHO05D002441 2.1e-12 75.9 103 40.8
Atru.chr4.1347 Acer truncatum HOM05D002230 ORTHO05D002441 2.7e-12 75.5 110 43.6
Aqoxy1G01987 Aquilegia oxysepala HOM05D002230 ORTHO05D002441 2.7e-12 75.5 110 42.7
Aa31LG1G7760 Aethionema arabicum HOM05D002230 ORTHO05D002441 3.6e-12 75.1 103 43.7
Cfa015221 Carpinus fangiana HOM05D002230 ORTHO05D002441 3.6e-12 75.1 110 41.8
Ciclev10027707m.g Citrus clementina HOM05D002230 ORTHO05D002441 3.6e-12 75.1 109 44.0
Manes.09G003400 Manihot esculenta HOM05D002230 ORTHO05D002441 3.6e-12 75.1 110 42.7
CiPaw.01G173300 Carya illinoinensis HOM05D002230 ORTHO05D002441 4.6e-12 74.7 110 41.8
Ciclev10018567m.g Citrus clementina HOM05D002230 ORTHO05D002441 4.6e-12 74.7 110 43.6
Eucgr.A00036 Eucalyptus grandis HOM05D002230 ORTHO05D002441 4.6e-12 74.7 110 42.7
Lalb_Chr01g0003061 Lupinus albus HOM05D002230 ORTHO05D002441 4.6e-12 74.7 110 42.7
TAR627G1002 Trochodendron aralioides HOM05D002230 ORTHO05D002441 4.6e-12 74.7 110 41.8
C08p51050 Brassica napus HOM05D002230 ORTHO05D002441 6.1e-12 74.3 103 40.8
BolC8t52632H Brassica oleracea HOM05D002230 ORTHO05D002441 6.1e-12 74.3 103 40.8
CARHR006400 Cardamine hirsuta HOM05D002230 ORTHO05D002441 6.1e-12 74.3 95 45.3
QL03p066506 Quercus lobata HOM05D002230 ORTHO05D002441 6.1e-12 74.3 110 41.8
Sed0010811 Sechium edule HOM05D002230 ORTHO05D002441 6.1e-12 74.3 110 40.0
TWI38G2091 Tripterygium wilfordii HOM05D002230 ORTHO05D002441 6.1e-12 74.3 110 42.7
BcaC07g42052 Brassica carinata HOM05D002230 ORTHO05D002441 7.9e-12 73.9 104 40.4
Carub.0001s0605 Capsella rubella HOM05D002230 ORTHO05D002441 7.9e-12 73.9 103 39.8
Haze_01398 Corylus avellana HOM05D002230 ORTHO05D002441 7.9e-12 73.9 107 42.1
ECA236G3424 Erigeron canadensis HOM05D002230 ORTHO05D002441 1.0e-11 73.6 110 42.7
Glyma.11G125100 Glycine max HOM05D002230 ORTHO05D002441 1.0e-11 73.6 110 42.7
Glyma.12G049700 Glycine max HOM05D002230 ORTHO05D002441 1.0e-11 73.6 110 42.7
HanXRQChr14g0454041 Helianthus annuus HOM05D002230 ORTHO05D002441 1.0e-11 73.6 110 42.7
Lalb_Chr19g0138431 Lupinus albus HOM05D002230 ORTHO05D002441 1.0e-11 73.6 110 41.8
Sp1g05450 Schrenkiella parvula HOM05D002230 ORTHO05D002441 1.0e-11 73.6 103 41.7
Thecc.10G116300 Theobroma cacao HOM05D002230 ORTHO05D002441 1.0e-11 73.6 110 42.7
VMungo1127G0405 Vigna mungo HOM05D002230 ORTHO05D002441 1.0e-11 73.6 110 42.7
A10p05300 Brassica napus HOM05D002230 ORTHO05D002441 1.4e-11 73.2 103 41.7
C05p04900 Brassica napus HOM05D002230 ORTHO05D002441 1.4e-11 73.2 103 41.7
BolC5t29262H Brassica oleracea HOM05D002230 ORTHO05D002441 1.4e-11 73.2 103 41.7
BraA10t42795Z Brassica rapa HOM05D002230 ORTHO05D002441 1.4e-11 73.2 103 41.7
Lj1g0018031 Lotus japonicus HOM05D002230 ORTHO05D002441 1.4e-11 73.2 110 41.8
Lj3g0013974 Lotus japonicus HOM05D002230 ORTHO05D002441 1.4e-11 73.2 110 41.8
A09p66820 Brassica napus HOM05D002230 ORTHO05D002441 1.8e-11 72.8 103 39.8
Gohir.A03G041200 Gossypium hirsutum HOM05D002230 ORTHO05D002441 1.8e-11 72.8 110 42.7
Gohir.A10G197400 Gossypium hirsutum HOM05D002230 ORTHO05D002441 1.8e-11 72.8 110 42.7
Gohir.D10G204500 Gossypium hirsutum HOM05D002230 ORTHO05D002441 1.8e-11 72.8 110 42.7
Gorai.003G133300 Gossypium raimondii HOM05D002230 ORTHO05D002441 1.8e-11 72.8 110 42.7
Gorai.011G229500 Gossypium raimondii HOM05D002230 ORTHO05D002441 1.8e-11 72.8 110 42.7
GSVIVG01020936001 Vitis vinifera HOM05D002230 ORTHO05D002441 1.8e-11 72.8 114 38.6
Cpa.g.sc9.331 Carica papaya HOM05D002230 ORTHO05D002441 2.3e-11 72.4 110 41.8
Nn3g21087 Nelumbo nucifera HOM05D002230 ORTHO05D002441 2.3e-11 72.4 110 40.9
Dinv44229 Davidia involucrata HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 40.9
MD00G1071300 Malus domestica HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 39.1
MD03G1154000 Malus domestica HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 39.1
Prupe.8G069100 Prunus persica HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 39.1
Solyc01g097640.3 Solanum lycopersicum HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 40.9
Sopen00g003550 Solanum pennellii HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 40.9
Sopen01g041250 Solanum pennellii HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 40.9
PGSC0003DMG403019442 Solanum tuberosum HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 40.9
unitig_748.g7990 Utricularia gibba HOM05D002230 ORTHO05D002441 3.0e-11 72.0 110 40.0
arahy.Tifrunner.gnm1.ann1.W5M1I0 Arachis hypogaea HOM05D002230 ORTHO05D002441 3.9e-11 71.6 110 41.8
arahy.Tifrunner.gnm1.ann1.XT66D5 Arachis hypogaea HOM05D002230 ORTHO05D002441 3.9e-11 71.6 110 41.8
Lsat_1_v5_gn_6_31421 Lactuca sativa HOM05D002230 ORTHO05D002441 3.9e-11 71.6 110 40.9
Nitab4.5_0005729g0040 Nicotiana tabacum HOM05D002230 ORTHO05D002441 3.9e-11 71.6 110 40.0
Nitab4.5_0009733g0020 Nicotiana tabacum HOM05D002230 ORTHO05D002441 3.9e-11 71.6 110 40.0
Peaxi162Scf00282g00128 Petunia axillaris HOM05D002230 ORTHO05D002441 3.9e-11 71.6 110 40.0
Prupe.1G548200 Prunus persica HOM05D002230 ORTHO05D002441 3.9e-11 71.6 110 39.1
CSS0042856 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 40.9
Ca_20807_v3 Cicer arietinum L. HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 41.8
Dinv36883 Davidia involucrata HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 40.0
Phvul.011G051900 Phaseolus vulgaris HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 41.8
Potri.017G017700 Populus trichocarpa HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 40.0
RcHm_v2.0_Chr4g0406311 Rosa chinensis HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 39.1
RcHm_v2.0_Chr5g0051051 Rosa chinensis HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 39.1
Sed0001302 Sechium edule HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 38.2
Sc13g0000880 Simmondsia chinensis HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 40.0
TPR.G34218 Trifolium pratense HOM05D002230 ORTHO05D002441 5.1e-11 71.2 110 40.9
CSS0011706 Camellia sinensis var. sinensis HOM05D002230 ORTHO05D002441 6.7e-11 70.9 110 40.9
Cc03_g10880 Coffea canephora HOM05D002230 ORTHO05D002441 6.7e-11 70.9 110 39.1
Medtr4g068150 Medicago truncatula HOM05D002230 ORTHO05D002441 6.7e-11 70.9 110 40.9
HPP92_015122 Vanilla planifolia HOM05D002230 ORTHO05D002441 6.7e-11 70.9 110 39.1
Duzib114G0665 Durio zibethinus HOM05D002230 ORTHO05D002441 8.8e-11 70.5 110 41.8
Hma1.2p1_0007F.1_g004970 Hydrangea macrophylla HOM05D002230 ORTHO05D002441 8.8e-11 70.5 110 39.1
SHI00660 Sapria himalayana HOM05D002230 ORTHO05D002441 8.8e-11 70.5 102 44.1
CAN.G134.124 Capsicum annuum HOM05D002230 ORTHO05D002441 1.5e-10 69.7 110 39.1
CDE06G0512 Ceratophyllum demersum HOM05D002230 ORTHO05D002441 1.5e-10 69.7 109 38.5
FvH4_4g10660 Fragaria vesca HOM05D002230 ORTHO05D002441 1.5e-10 69.7 110 38.2
FAN07G1373 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.5e-10 69.7 110 38.2
FAN12G3082 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.5e-10 69.7 110 38.2
FAN12G3273 Fragaria x ananassa HOM05D002230 ORTHO05D002441 1.5e-10 69.7 110 38.2
Psat7g208680 Pisum sativum HOM05D002230 ORTHO05D002441 1.5e-10 69.7 110 40.0
FAN17G0610 Fragaria x ananassa HOM05D002230 ORTHO05D002441 2.0e-10 69.3 110 38.2
Os03g0333100 Oryza sativa ssp. japonica HOM05D002230 ORTHO05D002441 2.0e-10 69.3 109 41.3
vmacro16180 Vaccinium macrocarpon HOM05D002230 ORTHO05D002441 2.0e-10 69.3 112 37.5
CANSAT54G2648 Cannabis sativa HOM05D002230 ORTHO05D002441 2.5e-10 68.9 110 38.2
Ciclev10027721m.g Citrus clementina HOM05D002230 ORTHO05D002441 3.3e-10 68.6 110 41.8
ECA233G0320 Erigeron canadensis HOM05D002230 ORTHO05D002441 3.3e-10 68.6 110 40.9
PSO339G1305 Papaver somniferum HOM05D002230 ORTHO05D002441 3.3e-10 68.6 104 40.4
SGA_v2.0_scaffold172G39053 Striga asiatica HOM05D002230 ORTHO05D002441 3.3e-10 68.6 110 39.1
ATR0317G080 Amborella trichopoda HOM05D002230 ORTHO05D002441 4.3e-10 68.2 100 43.0
SHI22050 Sapria himalayana HOM05D002230 ORTHO05D002441 4.3e-10 68.2 104 43.3
AagrBONN_evm.TU.Sc2ySwM_369.529 Anthoceros agrestis HOM05D002230 ORTHO05D002441 7.4e-10 67.4 103 37.9
Lj1A1071T61 Lonicera japonica HOM05D002230 ORTHO05D002441 7.4e-10 67.4 110 38.2
Zm00001eb015920 Zea mays HOM05D002230 ORTHO05D002441 7.4e-10 67.4 109 40.4
BcaC05g24645 Brassica carinata HOM05D002230 ORTHO05D002441 1.3e-09 66.6 110 39.1
DCAR_027245 Daucus carota HOM05D002230 ORTHO05D002441 1.3e-09 66.6 110 39.1
PSO332G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 1.3e-09 66.6 104 40.4
PSO421G0346 Papaver somniferum HOM05D002230 ORTHO05D002441 1.3e-09 66.6 104 40.4
SalBow4G2246 Salvia bowleyana HOM05D002230 ORTHO05D002441 1.3e-09 66.6 110 36.4
Hund16448 Selenicereus undatus HOM05D002230 ORTHO05D002441 1.3e-09 66.6 110 37.3
EL10Ac3g07289 Beta vulgaris HOM05D002230 ORTHO05D002441 2.2e-09 65.9 108 36.1
PSO264G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 2.8e-09 65.5 104 39.4
PSO421G0277 Papaver somniferum HOM05D002230 ORTHO05D002441 2.8e-09 65.5 101 41.6
PSO423G0165 Papaver somniferum HOM05D002230 ORTHO05D002441 2.8e-09 65.5 79 53.2
PSO673G0034 Papaver somniferum HOM05D002230 ORTHO05D002441 2.8e-09 65.5 104 39.4
SEGI_31495 Sequoiadendron giganteum HOM05D002230 ORTHO05D002441 2.8e-09 65.5 100 39.0
Ah.04g150630 Amaranthus hybridus HOM05D002230 ORTHO05D002441 4.8e-09 64.7 108 38.0
AUR62018398 Chenopodium quinoa HOM05D002230 ORTHO05D002441 6.3e-09 64.3 108 38.0
AUR62021045 Chenopodium quinoa HOM05D002230 ORTHO05D002441 6.3e-09 64.3 108 38.0
PSO063G5780 Papaver somniferum HOM05D002230 ORTHO05D002441 6.3e-09 64.3 79 53.2
Pp3c13_14960 Physcomitrium patens HOM05D002230 ORTHO05D002441 6.3e-09 64.3 106 35.8
Mapoly0040s0120 Marchantia polymorpha HOM05D002230 ORTHO05D002441 8.2e-09 63.9 100 37.0
SMO358G0014 Selaginella moellendorffii HOM05D002230 ORTHO05D002441 1.1e-08 63.5 100 36.0
MBI04_g09487_MAGBIO Magnolia biondii HOM05D002230 ORTHO05D002441 2.4e-08 62.4 109 35.8
PSO170G0074 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 101 43.6
PSO675G3184 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 109 36.7
PSO781G0001 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 109 36.7
PSO781G0074 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 109 36.7
PSO781G0106 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 109 36.7
PSO781G0261 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 109 36.7
PSO781G0262 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 109 36.7
PSO832G2976 Papaver somniferum HOM05D002230 ORTHO05D002441 2.4e-08 62.4 99 44.4
Migut.A00192 Erythranthe guttata HOM05D002230 ORTHO05D002441 3.1e-08 62.0 110 35.5
Haze_26692 Corylus avellana HOM05D002230 ORTHO05D002441 1.5e-07 59.7 93 39.8
PSO384G3823 Papaver somniferum HOM05D002230 ORTHO05D002441 2.0e-07 59.3 109 38.5
PSO017G1730 Papaver somniferum HOM05D002230 ORTHO05D002441 2.6e-07 58.9 109 38.5
Cre10.g445600 Chlamydomonas reinhardtii HOM05D002230 ORTHO05D002441 3.4e-07 58.5 98 35.7
PSO782G4102 Papaver somniferum HOM05D002230 ORTHO05D302329 4.5e-07 58.2 84 39.3
PRCOL_00006812 Prasinoderma coloniale HOM05D002230 ORTHO05D002441 5.9e-07 57.8 97 34.0
PSO170G5838 Papaver somniferum HOM05D002230 ORTHO05D002441 1.0e-06 57.0 93 43.0
PSO017G2604 Papaver somniferum HOM05D002230 ORTHO05D002441 1.3e-06 56.6 97 36.1
PSO017G6673 Papaver somniferum HOM05D002230 ORTHO05D002441 3.8e-06 55.1 113 36.3
Sed0025157 Sechium edule HOM05D002230 ORTHO05D002441 3.8e-06 55.1 94 37.2
PSO170G1887 Papaver somniferum HOM05D002230 ORTHO05D002441 6.5e-06 54.3 97 35.1
PSO210G5793 Papaver somniferum HOM05D002230 ORTHO05D002441 6.5e-06 54.3 97 35.1
PSO339G4603 Papaver somniferum HOM05D002230 ORTHO05D002441 6.5e-06 54.3 97 35.1


User provided reference genes

Program Settings