Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0432 Papaver somniferum HOM05D001310 ORTHO05D302515 8.8e-116 420.2 204 100.0
PSO017G1837 Papaver somniferum HOM05D001310 ORTHO05D001283 2.6e-14 83.2 50 84.0
PSO478G3507 Papaver somniferum HOM05D001310 ORTHO05D001283 2.6e-14 83.2 50 84.0
QL10p029608 Quercus lobata HOM05D001310 ORTHO05D001283 3.8e-10 69.3 61 59.0
BcaC01g03719 Brassica carinata HOM05D001310 ORTHO05D001283 5.0e-10 68.9 49 67.3
C03p49320 Brassica napus HOM05D001310 ORTHO05D001283 5.0e-10 68.9 49 67.3
BolC3t17222H Brassica oleracea HOM05D001310 ORTHO05D001283 5.0e-10 68.9 49 67.3
BcaB06g25863 Brassica carinata HOM05D001310 ORTHO05D001283 6.5e-10 68.6 49 67.3
A05p31840 Brassica napus HOM05D001310 ORTHO05D001283 8.5e-10 68.2 49 65.3
C05p48330 Brassica napus HOM05D001310 ORTHO05D001283 8.5e-10 68.2 49 65.3
BraA05t22016Z Brassica rapa HOM05D001310 ORTHO05D001283 8.5e-10 68.2 49 65.3
Glyma.05G246300 Glycine max HOM05D001310 ORTHO05D001283 8.5e-10 68.2 54 64.8
Glyma.08G054300 Glycine max HOM05D001310 ORTHO05D001283 8.5e-10 68.2 54 64.8
VMungo0251G0933 Vigna mungo HOM05D001310 ORTHO05D001283 8.5e-10 68.2 54 64.8
A03p40480 Brassica napus HOM05D001310 ORTHO05D001283 1.1e-09 67.8 49 65.3
BraA03t13206Z Brassica rapa HOM05D001310 ORTHO05D001283 1.1e-09 67.8 49 65.3
PGR083G1224 Punica granatum HOM05D001310 ORTHO05D001283 1.1e-09 67.8 51 64.7
Sp3g16090 Schrenkiella parvula HOM05D001310 ORTHO05D001283 1.5e-09 67.4 49 65.3
Phvul.002G330000 Phaseolus vulgaris HOM05D001310 ORTHO05D001283 1.9e-09 67.0 54 63.0
Lalb_Chr05g0221661 Lupinus albus HOM05D001310 ORTHO05D001283 2.5e-09 66.6 54 61.1
Nn4g24242 Nelumbo nucifera HOM05D001310 ORTHO05D001283 2.5e-09 66.6 54 63.0
TAR374G1119 Trochodendron aralioides HOM05D001310 ORTHO05D001283 2.5e-09 66.6 49 65.3
Aa31LG8G4830 Aethionema arabicum HOM05D001310 ORTHO05D001283 3.2e-09 66.2 49 63.3
MBI12_g33080_MAGBIO Magnolia biondii HOM05D001310 ORTHO05D001283 3.2e-09 66.2 49 65.3
Actinidia35128 Actinidia chinensis HOM05D001310 ORTHO05D001283 4.2e-09 65.9 54 59.3
Lalb_Chr16g0387011 Lupinus albus HOM05D001310 ORTHO05D001283 4.2e-09 65.9 55 60.0
Aqoxy3G00064 Aquilegia oxysepala HOM05D001310 ORTHO05D001283 5.5e-09 65.5 49 65.3
AT3G17970 Arabidopsis thaliana HOM05D001310 ORTHO05D001283 5.5e-09 65.5 49 63.3
BcaC05g28730 Brassica carinata HOM05D001310 ORTHO05D001283 5.5e-09 65.5 48 64.6
BolC5t33567H Brassica oleracea HOM05D001310 ORTHO05D001283 5.5e-09 65.5 48 64.6
Carub.0003s1769 Capsella rubella HOM05D001310 ORTHO05D001283 5.5e-09 65.5 49 61.2
Medtr8g107280 Medicago truncatula HOM05D001310 ORTHO05D001283 5.5e-09 65.5 54 59.3
Thhalv10020361m.g Eutrema salsugineum HOM05D001310 ORTHO05D001283 7.2e-09 65.1 49 63.3
AL3G31130 Arabidopsis lyrata HOM05D001310 ORTHO05D001283 9.4e-09 64.7 49 61.2
CARHR093290 Cardamine hirsuta HOM05D001310 ORTHO05D001283 9.4e-09 64.7 49 61.2
Manes.06G006100 Manihot esculenta HOM05D001310 ORTHO05D001283 9.4e-09 64.7 49 67.3
TWI81G1069 Tripterygium wilfordii HOM05D001310 ORTHO05D001283 9.4e-09 64.7 49 63.3
BcaC08g43058 Brassica carinata HOM05D001310 ORTHO05D001283 1.2e-08 64.3 49 59.2
C06p03170 Brassica napus HOM05D001310 ORTHO05D001283 1.2e-08 64.3 49 59.2
BolC6t35435H Brassica oleracea HOM05D001310 ORTHO05D001283 1.2e-08 64.3 49 59.2
Ca_17191_v3 Cicer arietinum L. HOM05D001310 ORTHO05D001283 1.2e-08 64.3 54 61.1
TPR.G1418 Trifolium pratense HOM05D001310 ORTHO05D001283 1.2e-08 64.3 54 59.3
CSS0036070 Camellia sinensis var. sinensis HOM05D001310 ORTHO05D001283 1.6e-08 63.9 49 61.2
CANSAT80G2848 Cannabis sativa HOM05D001310 ORTHO05D001283 1.6e-08 63.9 49 61.2
CiPaw.15G143400 Carya illinoinensis HOM05D001310 ORTHO05D001283 1.6e-08 63.9 49 61.2
TWI60G0055 Tripterygium wilfordii HOM05D001310 ORTHO05D001283 1.6e-08 63.9 49 63.3
Haze_18854 Corylus avellana HOM05D001310 ORTHO05D001283 2.1e-08 63.5 49 59.2
Eucgr.K02274 Eucalyptus grandis HOM05D001310 ORTHO05D001283 2.1e-08 63.5 49 65.3
Lj2g0027653 Lotus japonicus HOM05D001310 ORTHO05D001283 2.1e-08 63.5 61 55.7
GSVIVG01008433001 Vitis vinifera HOM05D001310 ORTHO05D001283 2.1e-08 63.5 54 59.3
CDE11G0307 Ceratophyllum demersum HOM05D001310 ORTHO05D001283 2.7e-08 63.2 54 59.3
Hma1.2p1_0669F.1_g200140 Hydrangea macrophylla HOM05D001310 ORTHO05D001283 2.7e-08 63.2 49 65.3
Lj5C158T11 Lonicera japonica HOM05D001310 ORTHO05D001283 2.7e-08 63.2 49 61.2
Oeu026279.1 Olea europaea HOM05D001310 ORTHO05D001283 2.7e-08 63.2 51 60.8
BcaB07g33744 Brassica carinata HOM05D001310 ORTHO05D001283 4.7e-08 62.4 49 55.1
Cpa.g.sc3.396 Carica papaya HOM05D001310 ORTHO05D001283 4.7e-08 62.4 49 61.2
Duzib205G1371 Durio zibethinus HOM05D001310 ORTHO05D001283 4.7e-08 62.4 49 65.3
Psat4g001480 Pisum sativum HOM05D001310 ORTHO05D001283 4.7e-08 62.4 49 61.2
TAR622G0809 Trochodendron aralioides HOM05D001310 ORTHO05D001283 4.7e-08 62.4 49 63.3
A06p04360 Brassica napus HOM05D001310 ORTHO05D001283 8.0e-08 61.6 49 57.1
BraA06t23640Z Brassica rapa HOM05D001310 ORTHO05D001283 8.0e-08 61.6 49 57.1
Thecc.03G056700 Theobroma cacao HOM05D001310 ORTHO05D001283 8.0e-08 61.6 54 57.4
CiPaw.16G093500 Carya illinoinensis HOM05D001310 ORTHO05D001283 1.0e-07 61.2 49 61.2
Manes.14G171400 Manihot esculenta HOM05D001310 ORTHO05D001283 1.0e-07 61.2 49 63.3
Potri.015G038600 Populus trichocarpa HOM05D001310 ORTHO05D001283 1.0e-07 61.2 61 49.2
Actinidia28137 Actinidia chinensis HOM05D001310 ORTHO05D001283 1.4e-07 60.8 49 57.1
Ciclev10007714m.g Citrus clementina HOM05D001310 ORTHO05D001283 1.4e-07 60.8 49 61.2
Sc12g0007230 Simmondsia chinensis HOM05D001310 ORTHO05D001283 1.4e-07 60.8 49 57.1
Dinv04126 Davidia involucrata HOM05D001310 ORTHO05D001283 1.8e-07 60.5 48 62.5
Dinv04127 Davidia involucrata HOM05D001310 ORTHO05D001283 1.8e-07 60.5 48 62.5
Dinv04131 Davidia involucrata HOM05D001310 ORTHO05D001283 1.8e-07 60.5 48 62.5
Gohir.A11G003100 Gossypium hirsutum HOM05D001310 ORTHO05D001283 1.8e-07 60.5 49 59.2
Gohir.D11G002700 Gossypium hirsutum HOM05D001310 ORTHO05D001283 1.8e-07 60.5 49 59.2
Gorai.007G003700 Gossypium raimondii HOM05D001310 ORTHO05D001283 1.8e-07 60.5 49 59.2
Sabra12G0032900 Salix brachista HOM05D001310 ORTHO05D001283 1.8e-07 60.5 49 57.1
COL.COLO4_04375 Corchorus olitorius HOM05D001310 ORTHO05D001283 2.3e-07 60.1 49 59.2
Solyc03g118690.4 Solanum lycopersicum HOM05D001310 ORTHO05D001283 2.3e-07 60.1 49 65.3
THA.LOC104820350 Tarenaya hassleriana HOM05D001310 ORTHO05D001283 2.3e-07 60.1 49 53.1
Oeu046164.2 Olea europaea HOM05D001310 ORTHO05D001283 3.0e-07 59.7 51 58.8
Rhsim08G0126200 Rhododendron simsii HOM05D001310 ORTHO05D001283 3.0e-07 59.7 49 59.2
vmacro17783 Vaccinium macrocarpon HOM05D001310 ORTHO05D001283 3.0e-07 59.7 49 59.2
CSS0011156 Camellia sinensis var. sinensis HOM05D001310 ORTHO05D001283 4.0e-07 59.3 61 52.5
CSS0018609 Camellia sinensis var. sinensis HOM05D001310 ORTHO05D001283 4.0e-07 59.3 61 52.5
DCAR_014505 Daucus carota HOM05D001310 ORTHO05D001283 4.0e-07 59.3 50 60.0
MD06G1227100 Malus domestica HOM05D001310 ORTHO05D001283 4.0e-07 59.3 49 57.1
Nn3g18286 Nelumbo nucifera HOM05D001310 ORTHO05D001283 4.0e-07 59.3 61 52.5
FvH4_5g17380 Fragaria vesca HOM05D001310 ORTHO05D001283 5.2e-07 58.9 50 60.0
FAN08G1056 Fragaria x ananassa HOM05D001310 ORTHO05D001283 5.2e-07 58.9 50 60.0
FAN13G2361 Fragaria x ananassa HOM05D001310 ORTHO05D001283 5.2e-07 58.9 50 60.0
FAN18G0790 Fragaria x ananassa HOM05D001310 ORTHO05D001283 5.2e-07 58.9 50 60.0
Sabra15G0037500 Salix brachista HOM05D001310 ORTHO05D001283 5.2e-07 58.9 61 45.9
MSTRG.9304 Avicennia marina HOM05D001310 ORTHO05D001283 6.8e-07 58.5 50 54.0
FAN04G0115 Fragaria x ananassa HOM05D001310 ORTHO05D001283 6.8e-07 58.5 50 60.0
Sopen03g037650 Solanum pennellii HOM05D001310 ORTHO05D001283 6.8e-07 58.5 49 61.2
Cc04_g06250 Coffea canephora HOM05D001310 ORTHO05D001283 8.8e-07 58.2 49 55.1
Potri.012G046900 Populus trichocarpa HOM05D001310 ORTHO05D001283 8.8e-07 58.2 49 55.1
Prupe.5G233600 Prunus persica HOM05D001310 ORTHO05D001283 8.8e-07 58.2 54 51.9
CAN.G843.55 Capsicum annuum HOM05D001310 ORTHO05D001283 1.2e-06 57.8 50 62.0
Lj4g0007471 Lotus japonicus HOM05D001310 ORTHO05D001283 1.2e-06 57.8 53 54.7
PGSC0003DMG400005752 Solanum tuberosum HOM05D001310 ORTHO05D001283 1.2e-06 57.8 49 61.2
Nitab4.5_0003401g0010 Nicotiana tabacum HOM05D001310 ORTHO05D001283 1.5e-06 57.4 49 61.2
Sed0010693 Sechium edule HOM05D001310 ORTHO05D001283 1.5e-06 57.4 49 57.1
ATR0564G362 Amborella trichopoda HOM05D001310 ORTHO05D001283 2.0e-06 57.0 49 59.2
MD14G1236500 Malus domestica HOM05D001310 ORTHO05D001283 2.0e-06 57.0 61 47.5
GSVIVG01038788001 Vitis vinifera HOM05D001310 ORTHO05D001283 2.0e-06 57.0 49 55.1
CsaV3_1G004380 Cucumis sativus L. HOM05D001310 ORTHO05D001283 2.6e-06 56.6 49 53.1
EL10Ac5g11565 Beta vulgaris HOM05D001310 ORTHO05D001283 3.4e-06 56.2 49 57.1
MELO3C017360.2 Cucumis melo HOM05D001310 ORTHO05D001283 3.4e-06 56.2 49 53.1
Lsat_1_v5_gn_9_117041 Lactuca sativa HOM05D001310 ORTHO05D001283 3.4e-06 56.2 49 59.2
Nitab4.5_0004556g0020 Nicotiana tabacum HOM05D001310 ORTHO05D001283 3.4e-06 56.2 49 59.2
RcHm_v2.0_Chr7g0178361 Rosa chinensis HOM05D001310 ORTHO05D001283 3.4e-06 56.2 50 56.0
ECA233G3392 Erigeron canadensis HOM05D001310 ORTHO05D001283 4.4e-06 55.8 54 51.9
Sp1g35520 Schrenkiella parvula HOM05D001310 ORTHO05D001283 4.4e-06 55.8 49 53.1
Atru.chr9.1733 Acer truncatum HOM05D001310 ORTHO05D001283 5.7e-06 55.5 49 53.1
Os03g0707900 Oryza sativa ssp. japonica HOM05D001310 ORTHO05D001283 7.5e-06 55.1 49 55.1
arahy.Tifrunner.gnm1.ann1.DWV9W6 Arachis hypogaea HOM05D001310 ORTHO05D001283 9.8e-06 54.7 44 63.6
HanXRQChr13g0420761 Helianthus annuus HOM05D001310 ORTHO05D001283 9.8e-06 54.7 49 46.9
SGA_v2.0_scaffold2G01355 Striga asiatica HOM05D001310 ORTHO05D001283 9.8e-06 54.7 52 53.8


User provided reference genes

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