Gene: Carub.0003s1769

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1769
  • Transcript Identifier Carub.0003s1769.1
  • Gene Type Coding gene
  • Location scaffold_3 : 6264355-6267953 : positive

Gene Family Information

  • ID HOM05D001310
  • #Genes/#Species 480/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1769.v1.1
  • pacid 39242485
  • synonym Carubv10013209m.g

Descriptions

  • Description PF00515//PF01425//PF13414 - Tetratricopeptide repeat (TPR_1) // Amidase (Amidase) // TPR repeat (TPR_11)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G17970
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G17970
GO:0031359
ISO
PLAZA Integrative Orthologyintegral component of chloroplast outer membrane AT3G17970
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G17970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036928 Amidase signature (AS) superfamily
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR023631 Amidase signature domain
Mapman id Description
23.1.2.4 Protein translocation.chloroplast.outer envelope TOC translocation system.preprotein receptor (Toc64-III)