Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO144G0168 Papaver somniferum HOM05D003673 ORTHO05D004764 2.3e-254 881.7 436 100.0
PSO210G5105 Papaver somniferum HOM05D003673 ORTHO05D004764 1.7e-172 609.8 435 68.3
PSO170G5322 Papaver somniferum HOM05D003673 ORTHO05D004764 2.1e-170 602.8 436 67.0
PSO210G6115 Papaver somniferum HOM05D003673 ORTHO05D004764 6.0e-170 601.3 434 68.4
PSO210G1881 Papaver somniferum HOM05D003673 ORTHO05D004764 6.8e-166 587.8 433 65.6
Nn7g37943 Nelumbo nucifera HOM05D003673 ORTHO05D004764 2.6e-165 585.9 418 70.6
TAR626G0427 Trochodendron aralioides HOM05D003673 ORTHO05D004764 1.2e-162 577.0 418 69.6
PSO675G0095 Papaver somniferum HOM05D003673 ORTHO05D004764 1.1e-160 570.5 421 66.7
Cpa.g.sc50.111 Carica papaya HOM05D003673 ORTHO05D004764 1.2e-157 560.5 432 64.8
Ciclev10031587m.g Citrus clementina HOM05D003673 ORTHO05D004764 1.5e-157 560.1 425 65.2
Thecc.01G168600 Theobroma cacao HOM05D003673 ORTHO05D004764 3.4e-157 558.9 425 66.8
Sabra02G0046800 Salix brachista HOM05D003673 ORTHO05D004764 7.6e-157 557.8 438 64.6
AUR62017589 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.7e-156 556.6 427 64.2
Potri.002G057400 Populus trichocarpa HOM05D003673 ORTHO05D004764 4.9e-156 555.1 438 63.7
HanXRQChr14g0451901 Helianthus annuus HOM05D003673 ORTHO05D004764 6.4e-156 554.7 437 64.5
COL.COLO4_38400 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.4e-155 553.5 426 66.4
Manes.02G088900 Manihot esculenta HOM05D003673 ORTHO05D004764 1.4e-155 553.5 439 63.8
ClCG11G016540 Citrullus lanatus HOM05D003673 ORTHO05D004764 1.9e-155 553.1 429 65.3
CiPaw.03G191900 Carya illinoinensis HOM05D003673 ORTHO05D004764 3.2e-155 552.4 438 63.5
AUR62015128 Chenopodium quinoa HOM05D003673 ORTHO05D004764 5.4e-155 551.6 429 63.4
Ca_06264_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 5.4e-155 551.6 429 64.6
Ca_30265_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 5.4e-155 551.6 429 64.6
Aqoxy1G01890 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 9.3e-155 550.8 433 64.2
BcaNung07075 Brassica carinata HOM05D003673 ORTHO05D004764 9.3e-155 550.8 438 64.2
CsaV3_4G032000 Cucumis sativus L. HOM05D003673 ORTHO05D004764 9.3e-155 550.8 432 65.0
BolC5t29254H Brassica oleracea HOM05D003673 ORTHO05D004764 1.2e-154 550.4 438 64.2
CANSAT64G2396 Cannabis sativa HOM05D003673 ORTHO05D004764 1.2e-154 550.4 419 64.4
Gorai.001G092000 Gossypium raimondii HOM05D003673 ORTHO05D004764 1.2e-154 550.4 434 65.2
Prupe.3G177700 Prunus persica HOM05D003673 ORTHO05D004764 1.2e-154 550.4 435 63.0
Gohir.D07G086000 Gossypium hirsutum HOM05D003673 ORTHO05D004764 3.5e-154 548.9 434 65.0
Carub.0001s0594 Capsella rubella HOM05D003673 ORTHO05D004764 4.6e-154 548.5 435 63.7
Sed0005423 Sechium edule HOM05D003673 ORTHO05D004764 4.6e-154 548.5 429 64.6
TWI59G0698 Tripterygium wilfordii HOM05D003673 ORTHO05D004764 4.6e-154 548.5 427 64.6
C05p04810 Brassica napus HOM05D003673 ORTHO05D004764 7.8e-154 547.7 435 64.4
PSO675G5654 Papaver somniferum HOM05D003673 ORTHO05D004764 7.8e-154 547.7 419 64.9
Gohir.A07G080400 Gossypium hirsutum HOM05D003673 ORTHO05D004764 1.0e-153 547.4 434 65.0
Aqoxy1G01891 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 1.3e-153 547.0 422 66.4
Dinv07706 Davidia involucrata HOM05D003673 ORTHO05D004764 1.3e-153 547.0 432 63.4
Lalb_Chr04g0248921 Lupinus albus HOM05D003673 ORTHO05D004764 1.3e-153 547.0 431 64.0
MELO3C022961.2 Cucumis melo HOM05D003673 ORTHO05D004764 1.7e-153 546.6 428 65.0
vmacro04781 Vaccinium macrocarpon HOM05D003673 ORTHO05D004764 1.7e-153 546.6 419 64.0
Medtr5g091060 Medicago truncatula HOM05D003673 ORTHO05D004764 2.3e-153 546.2 422 64.5
A10p05210 Brassica napus HOM05D003673 ORTHO05D004764 3.0e-153 545.8 420 64.5
AL1G16600 Arabidopsis lyrata HOM05D003673 ORTHO05D004764 3.9e-153 545.4 432 64.1
Hund22282 Selenicereus undatus HOM05D003673 ORTHO05D004764 3.9e-153 545.4 443 61.9
Aa31LG1G7910 Aethionema arabicum HOM05D003673 ORTHO05D004764 1.5e-152 543.5 421 64.6
QL08p044989 Quercus lobata HOM05D003673 ORTHO05D004764 1.9e-152 543.1 431 64.0
THA.LOC104815838 Tarenaya hassleriana HOM05D003673 ORTHO05D004764 1.9e-152 543.1 431 63.6
Cfa023358 Carpinus fangiana HOM05D003673 ORTHO05D004764 2.5e-152 542.7 442 61.5
Haze_13556 Corylus avellana HOM05D003673 ORTHO05D004764 2.5e-152 542.7 428 63.3
CSS0042622 Camellia sinensis var. sinensis HOM05D003673 ORTHO05D004764 3.3e-152 542.3 439 63.3
Sp1g05330 Schrenkiella parvula HOM05D003673 ORTHO05D004764 4.3e-152 542.0 420 64.8
CANSAT64G0060 Cannabis sativa HOM05D003673 ORTHO05D004764 5.6e-152 541.6 420 62.9
TPR.G10168 Trifolium pratense HOM05D003673 ORTHO05D004764 5.6e-152 541.6 426 62.7
Medtr5g090990 Medicago truncatula HOM05D003673 ORTHO05D004764 7.3e-152 541.2 420 63.8
BcaC07g42060 Brassica carinata HOM05D003673 ORTHO05D004764 1.3e-151 540.4 432 62.7
BraA10t42788Z Brassica rapa HOM05D003673 ORTHO05D004764 1.3e-151 540.4 437 61.6
A09p66930 Brassica napus HOM05D003673 ORTHO05D004764 1.6e-151 540.0 418 64.6
PGR042G2748 Punica granatum HOM05D003673 ORTHO05D004764 2.8e-151 539.3 426 63.4
ECA238G4715 Erigeron canadensis HOM05D003673 ORTHO05D004764 3.6e-151 538.9 421 63.4
MD17G1134800 Malus domestica HOM05D003673 ORTHO05D004764 3.6e-151 538.9 429 62.0
Rhsim07G0197900 Rhododendron simsii HOM05D003673 ORTHO05D004764 6.2e-151 538.1 422 63.7
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea HOM05D003673 ORTHO05D004764 8.1e-151 537.7 436 62.6
FAN09G3261 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.1e-150 537.3 419 63.0
RcHm_v2.0_Chr2g0152131 Rosa chinensis HOM05D003673 ORTHO05D004764 1.1e-150 537.3 429 62.5
Thhalv10007634m.g Eutrema salsugineum HOM05D003673 ORTHO05D004764 1.4e-150 537.0 420 64.5
FAN02G0649 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.8e-150 536.6 419 62.8
SGA_v2.0_scaffold73G24479 Striga asiatica HOM05D003673 ORTHO05D004764 1.8e-150 536.6 419 63.2
C08p51160 Brassica napus HOM05D003673 ORTHO05D004764 2.4e-150 536.2 431 62.4
BolC8t52642H Brassica oleracea HOM05D003673 ORTHO05D004764 2.4e-150 536.2 431 62.4
FAN05G2105 Fragaria x ananassa HOM05D003673 ORTHO05D004764 2.4e-150 536.2 426 63.1
Ah.01g013590 Amaranthus hybridus HOM05D003673 ORTHO05D004764 3.1e-150 535.8 418 62.7
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea HOM05D003673 ORTHO05D004764 3.1e-150 535.8 433 62.4
FAN14G2563 Fragaria x ananassa HOM05D003673 ORTHO05D004764 4.0e-150 535.4 419 63.2
FvH4_6g38670 Fragaria vesca HOM05D003673 ORTHO05D004764 5.3e-150 535.0 419 63.2
PGSC0003DMG400017420 Solanum tuberosum HOM05D003673 ORTHO05D004764 5.3e-150 535.0 421 63.4
Sc19g0001760 Simmondsia chinensis HOM05D003673 ORTHO05D004764 1.5e-149 533.5 436 62.6
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla HOM05D003673 ORTHO05D004764 7.6e-149 531.2 434 62.0
Glyma.14G030400 Glycine max HOM05D003673 ORTHO05D004764 9.9e-149 530.8 425 62.1
BraA09t42028Z Brassica rapa HOM05D003673 ORTHO05D004764 1.3e-148 530.4 425 63.1
EL10Ac9g22832 Beta vulgaris HOM05D003673 ORTHO05D004764 2.9e-148 529.3 428 61.7
Eucgr.A02022 Eucalyptus grandis HOM05D003673 ORTHO05D004764 4.9e-148 528.5 428 61.0
MSTRG.14903 Avicennia marina HOM05D003673 ORTHO05D004764 6.4e-148 528.1 429 62.7
DCAR_023045 Daucus carota HOM05D003673 ORTHO05D004764 8.4e-148 527.7 432 61.1
Nitab4.5_0002201g0040 Nicotiana tabacum HOM05D003673 ORTHO05D004764 8.4e-148 527.7 425 61.6
Psat2g017880 Pisum sativum HOM05D003673 ORTHO05D004764 1.1e-147 527.3 429 62.0
Nitab4.5_0000006g0440 Nicotiana tabacum HOM05D003673 ORTHO05D004764 1.4e-147 526.9 425 61.2
Sopen07g023610 Solanum pennellii HOM05D003673 ORTHO05D004764 1.4e-147 526.9 422 62.6
VMungo0647G2026 Vigna mungo HOM05D003673 ORTHO05D004764 2.4e-147 526.2 432 62.5
Medtr1g022325 Medicago truncatula HOM05D003673 ORTHO05D004764 4.2e-147 525.4 424 61.8
Peaxi162Scf00416g00004 Petunia axillaris HOM05D003673 ORTHO05D004764 7.1e-147 524.6 420 62.1
LjContig00049g0013493 Lotus japonicus HOM05D003673 ORTHO05D004764 2.1e-146 523.1 436 61.7
Solyc07g045050.3 Solanum lycopersicum HOM05D003673 ORTHO05D004764 2.1e-146 523.1 422 62.1
PGSC0003DMG400017707 Solanum tuberosum HOM05D003673 ORTHO05D004764 2.7e-146 522.7 425 61.6
Sopen05g024810 Solanum pennellii HOM05D003673 ORTHO05D004764 4.6e-146 521.9 425 61.4
Phvul.008G194300 Phaseolus vulgaris HOM05D003673 ORTHO05D004764 6.0e-146 521.5 428 61.0
Eucgr.A02023 Eucalyptus grandis HOM05D003673 ORTHO05D004764 7.9e-146 521.2 443 59.6
CDE05G0951 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 2.3e-145 519.6 437 61.8
Eucgr.A02024 Eucalyptus grandis HOM05D003673 ORTHO05D004764 8.7e-145 517.7 430 60.2
Migut.M00071 Erythranthe guttata HOM05D003673 ORTHO05D004764 1.1e-144 517.3 422 61.8
CAN.G7.15 Capsicum annuum HOM05D003673 ORTHO05D004764 2.5e-144 516.2 419 60.6
MBI18_g13605_MAGBIO Magnolia biondii HOM05D003673 ORTHO05D004764 9.6e-144 514.2 440 61.1
COL.COLO4_38402 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.0e-140 504.2 428 57.9
unitig_899.g15456 Utricularia gibba HOM05D003673 ORTHO05D004764 4.9e-140 501.9 417 60.9
CANSAT64G0777 Cannabis sativa HOM05D003673 ORTHO05D004764 6.4e-140 501.5 434 59.2
Oeu051389.1 Olea europaea HOM05D003673 ORTHO05D004764 9.3e-139 497.7 420 59.8
Lsat_1_v5_gn_6_42781 Lactuca sativa HOM05D003673 ORTHO05D004764 1.2e-138 497.3 432 58.1
BcaB02g06780 Brassica carinata HOM05D003673 ORTHO05D004764 4.6e-138 495.4 418 61.2
EL10Ac9g22831 Beta vulgaris HOM05D003673 ORTHO05D004764 7.9e-138 494.6 405 61.2
SalBow1G2057 Salvia bowleyana HOM05D003673 ORTHO05D004764 3.7e-135 485.7 419 59.2
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.4e-131 473.8 396 60.1
Lsat_1_v5_gn_2_96721 Lactuca sativa HOM05D003673 ORTHO05D004764 4.2e-131 472.2 390 62.3
Zm00001eb232960 Zea mays HOM05D003673 ORTHO05D004764 6.1e-130 468.4 418 54.5
CDE02G2922 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 7.9e-130 468.0 431 58.0
SEGI_30126 Sequoiadendron giganteum HOM05D003673 ORTHO05D004764 1.0e-129 467.6 423 56.0
Dinv07089 Davidia involucrata HOM05D003673 ORTHO05D004764 5.7e-128 461.8 385 61.6
CARHR006180 Cardamine hirsuta HOM05D003673 ORTHO05D004764 1.3e-127 460.7 388 61.1
Pp3c1_27020 Physcomitrium patens HOM05D003673 ORTHO05D004764 1.3e-127 460.7 424 56.1
AT1G06570 Arabidopsis thaliana HOM05D003673 ORTHO05D004764 3.7e-127 459.1 383 61.6
RcHm_v2.0_Chr2g0152141 Rosa chinensis HOM05D003673 ORTHO05D004764 1.8e-126 456.8 382 60.2
Pp3c2_15470 Physcomitrium patens HOM05D003673 ORTHO05D004764 5.3e-126 455.3 441 54.2
HPP92_002268 Vanilla planifolia HOM05D003673 ORTHO05D004764 9.0e-126 454.5 401 57.9
HanXRQChr02g0055101 Helianthus annuus HOM05D003673 ORTHO05D004764 6.5e-124 448.4 439 53.3
Mapoly0126s0038 Marchantia polymorpha HOM05D003673 ORTHO05D004764 4.2e-123 445.7 426 53.3
Actinidia24401 Actinidia chinensis HOM05D003673 ORTHO05D004764 3.6e-122 442.6 424 54.7
SMO358G0369 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 5.1e-121 438.7 439 54.0
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis HOM05D003673 ORTHO05D004764 9.7e-120 434.5 423 52.5
Thecc.01G168800 Theobroma cacao HOM05D003673 ORTHO05D004764 1.3e-119 434.1 427 55.3
Cre09.g399030 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 8.5e-116 421.4 430 52.3
PRCOL_00001771 Prasinoderma coloniale HOM05D003673 ORTHO05D004764 2.5e-115 419.9 423 52.5
Cre09.g398993 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 5.5e-115 418.7 430 51.6
CBR_g41741 Chara braunii HOM05D003673 ORTHO05D004764 2.8e-111 406.4 455 48.1
CBR_g46667 Chara braunii HOM05D003673 ORTHO05D004764 7.0e-110 401.7 454 48.0
CBR_g8495 Chara braunii HOM05D003673 ORTHO05D004764 2.0e-109 400.2 454 48.0
MCO11G070 Micromonas commoda HOM05D003673 ORTHO05D004764 2.0e-109 400.2 431 49.4
ECA233G6193 Erigeron canadensis HOM05D003673 ORTHO05D004764 1.1e-107 394.4 371 55.0
Lj8C8T1 Lonicera japonica HOM05D003673 ORTHO05D004764 8.0e-106 388.3 338 60.1
Zm00001eb304950 Zea mays HOM05D003673 ORTHO05D004764 8.0e-106 388.3 411 49.1
SMO118G0557 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 2.4e-102 376.7 431 46.9
Ah.02g114000 Amaranthus hybridus HOM05D003673 ORTHO05D004764 1.2e-101 374.4 377 52.3
Potri.005G205200 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.7e-100 370.5 436 48.6
Glyma.02G284600 Glycine max HOM05D003673 ORTHO05D004764 3.8e-100 369.4 362 54.7
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis HOM05D003673 ORTHO05D004764 3.2e-99 366.3 418 47.4
Solyc05g041200.4 Solanum lycopersicum HOM05D003673 ORTHO05D004764 8.3e-95 351.7 318 56.0
Medtr5g090980 Medicago truncatula HOM05D003673 ORTHO05D004764 1.0e-89 334.7 374 50.0
TPR.G25540 Trifolium pratense HOM05D003673 ORTHO05D004764 1.5e-88 330.9 423 44.4
MD09G1148400 Malus domestica HOM05D003673 ORTHO05D004764 1.2e-85 321.2 374 48.9
AUR62016194 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.9e-84 316.6 300 54.3
ATR0763G164 Amborella trichopoda HOM05D003673 ORTHO05D004764 6.3e-79 298.9 273 55.7
MD13G1156600 Malus domestica HOM05D003673 ORTHO05D004764 2.3e-76 290.4 384 43.5
Os02g0168100 Oryza sativa ssp. japonica HOM05D003673 ORTHO05D004764 3.9e-76 289.7 228 60.5
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea HOM05D003673 ORTHO05D004764 1.5e-72 277.7 384 45.3
Atru.chr6.2046 Acer truncatum HOM05D003673 ORTHO05D004764 3.4e-64 250.0 162 73.5
Thecc.01G169100 Theobroma cacao HOM05D003673 ORTHO05D004764 1.3e-63 248.1 253 54.2
AUR62039301 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.0e-60 238.4 202 57.4
AUR62044533 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.0e-60 238.4 202 57.4
AUR62035118 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.9e-59 234.2 197 58.4
AUR62039293 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.9e-59 234.2 197 58.4
AUR62039297 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.9e-59 234.2 197 58.4
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea HOM05D003673 ORTHO05D004764 4.4e-56 223.0 246 50.8
AUR62035117 Chenopodium quinoa HOM05D003673 ORTHO05D017143 2.1e-53 214.2 208 53.8
AUR62039294 Chenopodium quinoa HOM05D003673 ORTHO05D017143 2.1e-53 214.2 208 53.8
AUR62039298 Chenopodium quinoa HOM05D003673 ORTHO05D017143 2.1e-53 214.2 208 53.8
Cc05_g01440 Coffea canephora HOM05D003673 ORTHO05D004764 8.1e-42 175.6 103 78.6
GSVIVG01020837001 Vitis vinifera HOM05D003673 ORTHO05D004764 6.9e-41 172.6 104 76.0
AUR62044532 Chenopodium quinoa HOM05D003673 ORTHO05D017143 2.5e-35 154.1 121 62.0
Atru.chr6.2045 Acer truncatum HOM05D003673 ORTHO05D017143 4.0e-33 146.7 100 68.0
Cfa023357 Carpinus fangiana HOM05D003673 ORTHO05D017143 2.9e-31 140.6 98 66.3
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 4.2e-30 136.7 127 52.8
FvH4_5g31130 Fragaria vesca HOM05D003673 ORTHO05D004764 4.8e-26 123.2 89 66.3
FAN18G0200 Fragaria x ananassa HOM05D003673 ORTHO05D004764 5.3e-25 119.8 89 64.0
ATR0763G191 Amborella trichopoda HOM05D003673 ORTHO05D017143 3.2e-22 110.5 112 50.9
Dinv21956 Davidia involucrata HOM05D003673 ORTHO05D004764 4.2e-22 110.2 98 58.2
COL.COLO4_38401 Corchorus olitorius HOM05D003673 ORTHO05D004764 3.5e-21 107.1 149 45.6
MD05G1024200 Malus domestica HOM05D003673 ORTHO05D004764 1.3e-20 105.1 77 64.9
AUR62039302 Chenopodium quinoa HOM05D003673 ORTHO05D017143 6.7e-20 102.8 145 43.4
Haze_25279 Corylus avellana HOM05D003673 ORTHO05D004764 1.9e-19 101.3 163 41.1
GSVIVG01013079001 Vitis vinifera HOM05D003673 ORTHO05D004764 4.8e-18 96.7 67 67.2
COL.COLO4_20758 Corchorus olitorius HOM05D003673 ORTHO05D004764 9.0e-17 92.4 69 68.1
TPR.G10161 Trifolium pratense HOM05D003673 ORTHO05D004764 7.6e-16 89.4 50 78.0
CARHR006190 Cardamine hirsuta HOM05D003673 ORTHO05D004764 1.0e-15 89.0 50 78.0
COL.COLO4_19675 Corchorus olitorius HOM05D003673 ORTHO05D163473 1.1e-09 68.9 127 38.6
MD05G1024100 Malus domestica HOM05D003673 ORTHO05D017143 2.4e-09 67.8 45 62.2
FAN21G3810 Fragaria x ananassa HOM05D003673 ORTHO05D025527 4.1e-09 67.0 138 34.8
FAN18G2996 Fragaria x ananassa HOM05D003673 ORTHO05D025527 4.5e-08 63.5 138 34.1
Lj8C8T3 Lonicera japonica HOM05D003673 ORTHO05D004764 1.0e-07 62.4 36 75.0
FAN25G1183 Fragaria x ananassa HOM05D003673 ORTHO05D025527 1.3e-07 62.0 128 35.2


User provided reference genes

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