Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.7e-160 569.3 300 100.0
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 8.1e-158 560.5 300 98.7
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 3.1e-101 372.5 298 67.1
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 8.5e-99 364.4 297 64.6
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 8.5e-99 364.4 299 64.2
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.1e-98 364.0 311 63.7
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-98 364.0 297 65.3
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 7.2e-98 361.3 297 63.3
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 6.1e-97 358.2 299 62.5
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.4e-96 357.1 296 63.2
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.8e-96 356.7 302 62.9
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 5.1e-96 355.1 254 70.5
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.1e-95 354.0 307 63.5
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.5e-95 352.8 339 56.9
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.3e-95 352.1 306 62.1
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.7e-95 351.7 306 62.1
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.3e-94 350.5 301 64.1
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 2.2e-94 349.7 306 61.8
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.2e-94 349.7 306 61.8
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.8e-94 348.6 303 62.0
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 8.2e-94 347.8 303 62.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.1e-93 347.4 310 61.6
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.8e-93 346.7 300 60.0
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 4.1e-93 345.5 301 62.8
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 9.1e-93 344.4 308 60.1
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.2e-92 344.0 298 59.7
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.5e-92 343.6 299 60.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 2.6e-92 342.8 298 62.1
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 2.6e-92 342.8 304 61.2
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 7.7e-92 341.3 301 59.8
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 2.2e-91 339.7 316 60.1
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.9e-91 339.3 300 59.7
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.9e-91 339.3 300 59.7
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.9e-91 339.3 298 62.4
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 6.5e-91 338.2 297 59.9
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 8.5e-91 337.8 298 61.4
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 1.4e-90 337.0 308 58.8
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.9e-90 336.7 307 59.6
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.5e-90 335.1 297 63.3
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 7.2e-90 334.7 297 60.9
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 1.2e-89 334.0 297 59.6
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.6e-89 333.6 298 58.7
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 3.6e-89 332.4 298 59.1
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 3.6e-89 332.4 299 60.9
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.1e-89 331.6 294 59.9
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.0e-88 330.9 294 60.9
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.4e-88 330.5 298 60.1
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 2.3e-88 329.7 298 59.7
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 3.0e-88 329.3 298 59.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 6.7e-88 328.2 317 57.4
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 6.7e-88 328.2 298 59.7
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.5e-87 327.0 317 55.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 2.0e-87 326.6 280 63.2
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 2.6e-87 326.2 301 59.1
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 3.3e-87 325.9 317 56.2
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 4.4e-87 325.5 271 62.4
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 5.7e-87 325.1 317 57.4
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 5.7e-87 325.1 309 58.6
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 5.7e-87 325.1 313 57.8
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 7.4e-87 324.7 317 55.5
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 7.4e-87 324.7 317 55.5
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 1.3e-86 323.9 280 61.1
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.3e-86 323.9 317 55.5
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.3e-86 323.9 317 55.5
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.3e-86 323.9 303 56.8
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 8.2e-86 321.2 278 60.4
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 8.2e-86 321.2 295 58.0
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.4e-85 320.5 300 59.0
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.4e-85 320.5 298 61.1
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 1.2e-84 317.4 302 58.6
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 2.6e-84 316.2 318 55.7
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 4.5e-84 315.5 308 55.2
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 5.9e-84 315.1 301 56.1
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 7.7e-84 314.7 313 54.0
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.9e-83 312.8 304 55.9
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.2e-82 309.3 316 55.1
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.1e-81 306.6 299 55.2
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.7e-81 306.2 298 58.7
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 8.0e-81 304.7 286 57.0
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.0e-80 304.3 297 55.9
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 6.7e-80 301.6 267 58.8
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.0e-79 300.1 299 58.2
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 2.6e-79 299.7 299 55.2
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.6e-79 299.7 260 59.2
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.3e-79 299.3 307 53.4
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 5.7e-79 298.5 309 53.7
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 7.0e-77 291.6 310 53.2
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.6e-76 290.4 302 55.3
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.2e-73 280.8 260 57.7
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 3.0e-72 276.2 307 52.8
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 6.8e-72 275.0 268 55.2
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 7.5e-71 271.6 297 53.9
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 9.1e-69 264.6 305 52.1
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.7e-68 263.1 297 53.9
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.7e-67 260.4 296 51.4
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.2e-66 256.1 206 66.0
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.0e-64 251.1 310 47.4
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.8e-64 250.4 307 47.6
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 4.4e-63 245.7 280 51.8
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.7e-60 236.5 203 62.1
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.4e-56 224.2 245 52.2
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 4.6e-52 209.1 306 44.1
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 8.6e-51 204.9 228 50.0
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 5.6e-50 202.2 278 45.0
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.6e-49 199.5 302 43.7
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 5.8e-47 192.2 270 40.7
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.4e-45 186.8 304 39.8
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 6.0e-44 182.2 297 39.4
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 1.2e-41 174.5 314 37.6
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 3.6e-41 172.9 299 41.5
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.1e-40 171.4 148 59.5
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 6.8e-40 168.7 135 64.4
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 8.9e-40 168.3 188 50.0
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.4e-37 161.0 300 36.3
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 3.6e-33 146.4 132 62.9
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 6.2e-33 145.6 127 58.3
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 9.9e-31 138.3 120 61.7
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.6e-28 131.0 140 56.4
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 3.5e-28 129.8 120 55.8
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 6.2e-25 119.0 179 42.5
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 6.9e-24 115.5 99 56.6
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.4e-23 112.8 178 39.3
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.6e-23 112.1 154 48.1
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.2e-22 110.5 178 37.6
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 4.9e-22 109.4 152 40.8
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 4.2e-21 106.3 159 42.1
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.3e-19 101.3 90 60.0
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 5.6e-18 95.9 130 47.7
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 5.3e-16 89.4 99 51.5
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.5e-15 86.3 103 45.6
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.7e-12 77.0 94 51.1
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 9.6e-10 68.6 90 40.0
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 9.9e-07 58.5 64 53.1


User provided reference genes

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