Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7542 Papaver somniferum HOM05D005537 ORTHO05D006776 2.6e-295 1018.1 563 100.0
PSO170G0047 Papaver somniferum HOM05D005537 ORTHO05D006776 7.5e-282 973.4 571 95.4
TAR624G0592 Trochodendron aralioides HOM05D005537 ORTHO05D006776 2.9e-153 546.2 566 59.5
Aqoxy5G04373 Aquilegia oxysepala HOM05D005537 ORTHO05D006776 1.4e-142 510.8 596 52.5
Dinv25489 Davidia involucrata HOM05D005537 ORTHO05D006776 1.4e-142 510.8 564 53.5
Cfa013489 Carpinus fangiana HOM05D005537 ORTHO05D006776 3.5e-130 469.5 556 52.2
Haze_22074 Corylus avellana HOM05D005537 ORTHO05D006776 3.5e-130 469.5 556 52.3
CDE05G2659 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 3.9e-129 466.1 572 49.0
CDE05G3054 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 4.3e-128 462.6 568 50.9
Ciclev10010385m.g Citrus clementina HOM05D005537 ORTHO05D006776 2.8e-127 459.9 576 51.2
QL11p009893 Quercus lobata HOM05D005537 ORTHO05D006776 3.6e-127 459.5 583 50.6
CiPaw.07G200800 Carya illinoinensis HOM05D005537 ORTHO05D006776 8.9e-126 454.9 562 50.5
Lju50A4T51 Lonicera japonica HOM05D005537 ORTHO05D006776 2.2e-124 450.3 565 51.3
Manes.02G080100 Manihot esculenta HOM05D005537 ORTHO05D006776 8.4e-124 448.4 558 51.3
Nn8g40421 Nelumbo nucifera HOM05D005537 ORTHO05D006776 4.2e-123 446.0 572 46.3
Prupe.1G069700 Prunus persica HOM05D005537 ORTHO05D006776 4.2e-123 446.0 534 51.7
VMungo1215G0900 Vigna mungo HOM05D005537 ORTHO05D006776 4.2e-123 446.0 565 50.1
CANSAT01G2612 Cannabis sativa HOM05D005537 ORTHO05D006776 7.1e-123 445.3 570 50.2
CSS0042006 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 1.2e-122 444.5 565 50.4
CSS0045027 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 1.2e-122 444.5 565 50.4
MD13G1237200 Malus domestica HOM05D005537 ORTHO05D006776 5.1e-121 439.1 543 52.5
RhsimUnG0132200 Rhododendron simsii HOM05D005537 ORTHO05D006776 2.1e-119 433.7 578 45.8
Rhsim08G0162000 Rhododendron simsii HOM05D005537 ORTHO05D006776 2.8e-119 433.3 578 45.8
MELO3C003946.2 Cucumis melo HOM05D005537 ORTHO05D006776 4.8e-119 432.6 569 49.2
MD16G1242600 Malus domestica HOM05D005537 ORTHO05D006776 6.2e-119 432.2 535 51.2
Atru.chr2.2727 Acer truncatum HOM05D005537 ORTHO05D006776 1.1e-118 431.4 558 50.5
COL.COLO4_28459 Corchorus olitorius HOM05D005537 ORTHO05D006776 1.4e-118 431.0 566 48.6
FAN07G2345 Fragaria x ananassa HOM05D005537 ORTHO05D006776 2.4e-118 430.3 539 50.6
Gohir.D06G023000 Gossypium hirsutum HOM05D005537 ORTHO05D006776 4.0e-118 429.5 557 48.5
Sed0009431 Sechium edule HOM05D005537 ORTHO05D006776 5.3e-118 429.1 564 49.5
Gohir.A06G025900 Gossypium hirsutum HOM05D005537 ORTHO05D006776 2.6e-117 426.8 557 48.5
ClCG11G011540 Citrullus lanatus HOM05D005537 ORTHO05D006776 3.4e-117 426.4 569 46.4
Thecc.08G084500 Theobroma cacao HOM05D005537 ORTHO05D006776 4.4e-117 426.0 557 47.6
PGR044G0610 Punica granatum HOM05D005537 ORTHO05D006776 5.8e-117 425.6 540 49.4
Gorai.010G027600 Gossypium raimondii HOM05D005537 ORTHO05D006776 7.6e-117 425.2 557 48.1
Potri.012G036500 Populus trichocarpa HOM05D005537 ORTHO05D006776 1.3e-116 424.5 561 47.1
FAN17G0445 Fragaria x ananassa HOM05D005537 ORTHO05D006776 1.7e-116 424.1 525 50.1
FAN12G0761 Fragaria x ananassa HOM05D005537 ORTHO05D006776 4.9e-116 422.5 523 51.2
FvH4_4g06690 Fragaria vesca HOM05D005537 ORTHO05D006776 1.1e-115 421.4 523 51.1
Medtr4g133100 Medicago truncatula HOM05D005537 ORTHO05D006776 1.1e-115 421.4 569 49.2
Lj2g0020928 Lotus japonicus HOM05D005537 ORTHO05D006776 1.4e-115 421.0 564 48.8
TWI63G1753 Tripterygium wilfordii HOM05D005537 ORTHO05D006776 1.9e-115 420.6 605 45.0
FAN22G0220 Fragaria x ananassa HOM05D005537 ORTHO05D006776 2.4e-115 420.2 522 50.6
Sabra12G0025000 Salix brachista HOM05D005537 ORTHO05D006776 4.2e-115 419.5 564 46.6
Ca_21044_v3 Cicer arietinum L. HOM05D005537 ORTHO05D006776 2.1e-114 417.2 563 46.0
Glyma.13G103200 Glycine max HOM05D005537 ORTHO05D006776 2.1e-114 417.2 560 49.1
MBI14_g19455_MAGBIO Magnolia biondii HOM05D005537 ORTHO05D006776 6.0e-114 415.6 517 52.8
vmacro19325 Vaccinium macrocarpon HOM05D005537 ORTHO05D006776 7.8e-114 415.2 544 46.0
Duzib041G0776 Durio zibethinus HOM05D005537 ORTHO05D006776 1.3e-113 414.5 577 44.0
Gorai.002G136300 Gossypium raimondii HOM05D005537 ORTHO05D006776 2.3e-113 413.7 568 44.9
arahy.Tifrunner.gnm1.ann1.W452X0 Arachis hypogaea HOM05D005537 ORTHO05D006776 5.1e-113 412.5 567 45.7
arahy.Tifrunner.gnm1.ann1.HQKU7C Arachis hypogaea HOM05D005537 ORTHO05D006776 1.1e-112 411.4 567 46.6
ECA233G0023 Erigeron canadensis HOM05D005537 ORTHO05D006776 1.9e-112 410.6 561 47.4
HanXRQChr13g0401171 Helianthus annuus HOM05D005537 ORTHO05D006776 1.9e-112 410.6 559 47.4
THA.LOC104799619 Tarenaya hassleriana HOM05D005537 ORTHO05D006776 5.6e-112 409.1 537 46.4
TPR.G37121 Trifolium pratense HOM05D005537 ORTHO05D006776 2.1e-111 407.1 563 49.0
Lsat_1_v5_gn_6_25660 Lactuca sativa HOM05D005537 ORTHO05D006776 3.1e-110 403.3 557 48.1
Sabra15G0023400 Salix brachista HOM05D005537 ORTHO05D006776 3.1e-110 403.3 560 50.0
Duzib093G2104 Durio zibethinus HOM05D005537 ORTHO05D006776 9.0e-110 401.7 558 46.4
Peaxi162Scf00231g10125 Petunia axillaris HOM05D005537 ORTHO05D006776 4.5e-109 399.4 584 46.4
Sc18g0003000 Simmondsia chinensis HOM05D005537 ORTHO05D006776 6.4e-108 395.6 570 46.0
Eucgr.C02216 Eucalyptus grandis HOM05D005537 ORTHO05D006776 1.1e-107 394.8 565 47.8
Psat4g004960 Pisum sativum HOM05D005537 ORTHO05D006776 1.1e-107 394.8 559 49.0
Sopen07g006800 Solanum pennellii HOM05D005537 ORTHO05D006776 1.4e-107 394.4 588 46.4
DCAR_017989 Daucus carota HOM05D005537 ORTHO05D006776 2.4e-107 393.7 605 43.0
Lalb_Chr13g0299751 Lupinus albus HOM05D005537 ORTHO05D006776 3.2e-107 393.3 558 50.0
PGSC0003DMG400004098 Solanum tuberosum HOM05D005537 ORTHO05D006776 4.2e-107 392.9 587 47.5
Thhalv10013208m.g Eutrema salsugineum HOM05D005537 ORTHO05D006776 9.3e-107 391.7 553 41.4
Solyc07g017940.1 Solanum lycopersicum HOM05D005537 ORTHO05D006776 2.7e-106 390.2 591 45.3
Cc06_g13120 Coffea canephora HOM05D005537 ORTHO05D006776 1.0e-105 388.3 586 44.4
Gohir.A01G123800 Gossypium hirsutum HOM05D005537 ORTHO05D006776 1.0e-105 388.3 557 44.7
Nitab4.5_0000055g0260 Nicotiana tabacum HOM05D005537 ORTHO05D006776 5.1e-105 386.0 597 44.6
AT5G20600 Arabidopsis thaliana HOM05D005537 ORTHO05D006776 1.9e-104 384.0 551 40.7
Sed0014380 Sechium edule HOM05D005537 ORTHO05D006776 2.5e-104 383.6 568 43.1
AL6G32140 Arabidopsis lyrata HOM05D005537 ORTHO05D006776 1.4e-102 377.9 551 42.5
Sp6g23880 Schrenkiella parvula HOM05D005537 ORTHO05D006776 4.0e-102 376.3 552 42.8
ATR0580G047 Amborella trichopoda HOM05D005537 ORTHO05D006776 5.3e-102 375.9 713 39.8
CARHR192210 Cardamine hirsuta HOM05D005537 ORTHO05D006776 6.9e-102 375.6 552 40.6
Ah.09g230210 Amaranthus hybridus HOM05D005537 ORTHO05D006776 2.6e-101 373.6 565 44.8
MSTRG.26216 Avicennia marina HOM05D005537 ORTHO05D006776 3.4e-101 373.2 571 43.3
Nitab4.5_0004772g0040 Nicotiana tabacum HOM05D005537 ORTHO05D006776 2.2e-100 370.5 593 43.2
BcaB08g36512 Brassica carinata HOM05D005537 ORTHO05D006776 2.9e-100 370.2 552 40.6
Carub.0006s1893 Capsella rubella HOM05D005537 ORTHO05D006776 3.8e-100 369.8 551 41.2
CAN.G1186.23 Capsicum annuum HOM05D005537 ORTHO05D006776 8.4e-100 368.6 591 43.7
AUR62021325 Chenopodium quinoa HOM05D005537 ORTHO05D006776 1.1e-99 368.2 557 40.4
BcaC04g19447 Brassica carinata HOM05D005537 ORTHO05D006776 9.3e-99 365.2 554 40.3
C09p55630 Brassica napus HOM05D005537 ORTHO05D006776 9.3e-99 365.2 554 40.1
BolC9t58429H Brassica oleracea HOM05D005537 ORTHO05D006776 9.3e-99 365.2 550 39.8
Migut.K00238 Erythranthe guttata HOM05D005537 ORTHO05D006776 4.6e-98 362.8 569 44.3
Aa31LG1G14080 Aethionema arabicum HOM05D005537 ORTHO05D006776 3.0e-97 360.1 522 41.8
A10p19410 Brassica napus HOM05D005537 ORTHO05D006776 6.7e-97 359.0 551 41.2
BraA10t44018Z Brassica rapa HOM05D005537 ORTHO05D006776 6.7e-97 359.0 551 41.2
CiPaw.08G029800 Carya illinoinensis HOM05D005537 ORTHO05D006776 2.8e-95 353.6 482 45.9
HPP92_018575 Vanilla planifolia HOM05D005537 ORTHO05D006776 2.4e-94 350.5 586 38.9
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 2.6e-93 347.1 552 39.3
SGA_v2.0_scaffold12G06075 Striga asiatica HOM05D005537 ORTHO05D006776 7.6e-93 345.5 564 41.3
SGA_v2.0_scaffold17G07935 Striga asiatica HOM05D005537 ORTHO05D006776 3.8e-92 343.2 578 40.0
Cpa.g.sc115.49 Carica papaya HOM05D005537 ORTHO05D006776 9.3e-91 338.6 507 42.4
SHI03078 Sapria himalayana HOM05D005537 ORTHO05D006776 6.1e-90 335.9 554 43.1
Gohir.D01G111500 Gossypium hirsutum HOM05D005537 ORTHO05D006776 7.4e-88 328.9 456 43.0
unitig_899.g15473 Utricularia gibba HOM05D005537 ORTHO05D006776 8.2e-87 325.5 574 39.4
Actinidia01575 Actinidia chinensis HOM05D005537 ORTHO05D006776 1.4e-86 324.7 591 40.6
Os04g0658600 Oryza sativa ssp. japonica HOM05D005537 ORTHO05D006776 4.1e-86 323.2 560 42.9
SEGI_41129 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 6.9e-86 322.4 650 34.6
CsaV3_2G008990 Cucumis sativus L. HOM05D005537 ORTHO05D006776 1.5e-85 321.2 336 50.3
Zm00001eb067650 Zea mays HOM05D005537 ORTHO05D006776 1.1e-83 315.1 558 40.3
TPR.G1254 Trifolium pratense HOM05D005537 ORTHO05D006776 5.5e-83 312.8 522 44.4
Psat2g005880 Pisum sativum HOM05D005537 ORTHO05D006776 1.6e-82 311.2 585 38.6
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 1.8e-81 307.8 550 37.1
Lju432C4G13 Lonicera japonica HOM05D005537 ORTHO05D006776 9.1e-78 295.4 476 40.8
RcHm_v2.0_Chr4g0398601 Rosa chinensis HOM05D005537 ORTHO05D006776 2.0e-77 294.3 307 49.2
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 1.7e-76 291.2 541 36.8
Psat2g005840 Pisum sativum HOM05D005537 ORTHO05D006776 3.3e-72 276.9 534 38.2
SEGI_27163 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 4.1e-70 270.0 579 33.5
A03p10160 Brassica napus HOM05D005537 ORTHO05D006776 2.2e-68 264.2 486 35.8
Mapoly0006s0254 Marchantia polymorpha HOM05D005537 ORTHO05D006776 1.9e-67 261.2 633 33.6
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 5.5e-67 259.6 445 38.9
Pp3c12_970 Physcomitrium patens HOM05D005537 ORTHO05D006776 1.1e-62 245.4 689 30.5
AagrBONN_evm.TU.Sc2ySwM_228.2028 Anthoceros agrestis HOM05D005537 ORTHO05D006776 1.2e-56 225.3 640 29.7
SMO012G0033 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 1.3e-55 221.9 560 33.9
Zm00001eb432550 Zea mays HOM05D005537 ORTHO05D006776 5.4e-54 216.5 500 34.6
Pp3c17_1280 Physcomitrium patens HOM05D005537 ORTHO05D006776 2.0e-53 214.5 342 38.0
unitig_746.g26559 Utricularia gibba HOM05D005537 ORTHO05D006776 4.5e-53 213.4 271 42.1
BcaB01g04778 Brassica carinata HOM05D005537 ORTHO05D006776 5.5e-51 206.5 547 29.6
EL10Ac8g18309 Beta vulgaris HOM05D005537 ORTHO05D006776 2.1e-50 204.5 422 40.3
BraA03t10326Z Brassica rapa HOM05D005537 ORTHO05D006776 1.0e-44 185.7 208 45.7
MELO3C020712.2 Cucumis melo HOM05D005537 ORTHO05D006776 3.7e-39 167.2 171 49.7
CBR_g32208 Chara braunii HOM05D005537 ORTHO05D006776 1.2e-37 162.2 286 32.9
Cc00_g32040 Coffea canephora HOM05D005537 ORTHO05D006776 2.7e-37 161.0 148 53.4
SEGI_03037 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 3.0e-36 157.5 565 27.1
SMO172G0175 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 1.2e-34 152.1 493 26.4
Cre01.g019200 Chlamydomonas reinhardtii HOM05D005537 ORTHO05D006776 2.3e-33 147.9 284 33.8
Glyma.17G055832 Glycine max HOM05D005537 ORTHO05D006776 9.2e-30 136.0 159 56.0
Oeu009853.2 Olea europaea HOM05D005537 ORTHO05D006776 5.6e-27 126.7 167 50.9
FvH4_5g34681 Fragaria vesca HOM05D005537 ORTHO05D006776 3.4e-24 117.5 129 48.1
PRCOL_00002161 Prasinoderma coloniale HOM05D005537 ORTHO05D006776 4.6e-21 107.1 306 27.1
MCO12G389 Micromonas commoda HOM05D005537 ORTHO05D006776 4.0e-17 94.0 164 32.3
FvH4_2g25020 Fragaria vesca HOM05D005537 ORTHO05D006776 2.2e-15 88.2 67 56.7
FAN24G0683 Fragaria x ananassa HOM05D005537 ORTHO05D006776 2.2e-15 88.2 67 56.7
unitig_746.g26560 Utricularia gibba HOM05D005537 ORTHO05D006776 9.2e-14 82.8 125 44.8
MSTRG.6231 Avicennia marina HOM05D005537 ORTHO05D006776 3.2e-06 57.8 80 45.0


User provided reference genes

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