Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7541 Papaver somniferum HOM05D006573 ORTHO05D008073 2.4e-276 954.9 488 100.0
PSO017G7064 Papaver somniferum HOM05D006573 ORTHO05D008073 1.0e-263 912.9 488 96.3
TAR362G0441 Trochodendron aralioides HOM05D006573 ORTHO05D008073 1.3e-189 666.8 488 68.4
Nn1g07946 Nelumbo nucifera HOM05D006573 ORTHO05D008073 4.9e-189 664.8 490 67.3
MBI11_g07442_MAGBIO Magnolia biondii HOM05D006573 ORTHO05D008073 1.6e-184 649.8 489 66.7
Aqoxy2G03898 Aquilegia oxysepala HOM05D006573 ORTHO05D008073 2.1e-179 632.9 481 67.8
Eucgr.B02180 Eucalyptus grandis HOM05D006573 ORTHO05D008073 7.4e-177 624.4 379 78.1
Haze_04495 Corylus avellana HOM05D006573 ORTHO05D008073 2.1e-176 622.9 365 80.3
THA.LOC104805797 Tarenaya hassleriana HOM05D006573 ORTHO05D008073 6.3e-176 621.3 364 80.5
CSS0006565 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 3.1e-175 619.0 489 65.0
Thhalv10007587m.g Eutrema salsugineum HOM05D006573 ORTHO05D008073 5.3e-175 618.2 376 79.8
Manes.09G144600 Manihot esculenta HOM05D006573 ORTHO05D008073 6.9e-175 617.8 453 68.2
Hma1.2p1_0123F.1_g058030 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 2.6e-174 615.9 488 64.5
Duzib177G1122 Durio zibethinus HOM05D006573 ORTHO05D008073 1.0e-173 614.0 492 64.0
Prupe.6G356100 Prunus persica HOM05D006573 ORTHO05D008073 1.3e-173 613.6 490 64.9
Thecc.05G259800 Theobroma cacao HOM05D006573 ORTHO05D008073 1.3e-173 613.6 494 63.2
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 6.5e-173 611.3 377 77.2
CANSAT21G0678 Cannabis sativa HOM05D006573 ORTHO05D008073 6.5e-173 611.3 381 76.9
Cpa.g.sc51.78 Carica papaya HOM05D006573 ORTHO05D008073 6.5e-173 611.3 490 65.9
Cc09_g03200 Coffea canephora HOM05D006573 ORTHO05D008073 6.5e-173 611.3 492 63.8
Gohir.D11G250400 Gossypium hirsutum HOM05D006573 ORTHO05D008073 6.5e-173 611.3 491 65.2
Gorai.007G268500 Gossypium raimondii HOM05D006573 ORTHO05D008073 6.5e-173 611.3 491 65.2
CARHR008450 Cardamine hirsuta HOM05D006573 ORTHO05D008073 1.1e-172 610.5 376 79.0
C05p06650 Brassica napus HOM05D006573 ORTHO05D008073 1.4e-172 610.1 387 76.2
BolC5t29425H Brassica oleracea HOM05D006573 ORTHO05D008073 1.9e-172 609.8 387 76.0
Sp1g07210 Schrenkiella parvula HOM05D006573 ORTHO05D008073 2.5e-172 609.4 376 77.1
BraA06t23762Z Brassica rapa HOM05D006573 ORTHO05D008073 3.2e-172 609.0 387 76.2
MD12G1255200 Malus domestica HOM05D006573 ORTHO05D008073 4.2e-172 608.6 488 64.1
A06p05540 Brassica napus HOM05D006573 ORTHO05D008073 7.2e-172 607.8 387 76.0
FAN05G3303 Fragaria x ananassa HOM05D006573 ORTHO05D008073 7.2e-172 607.8 400 73.2
CDE05G0683 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 1.2e-171 607.1 489 64.4
GSVIVG01026405001 Vitis vinifera HOM05D006573 ORTHO05D008073 1.2e-171 607.1 437 68.9
FAN05G2122 Fragaria x ananassa HOM05D006573 ORTHO05D008073 1.6e-171 606.7 488 63.5
AL1G18980 Arabidopsis lyrata HOM05D006573 ORTHO05D008073 2.1e-171 606.3 377 78.8
Potri.013G053100 Populus trichocarpa HOM05D006573 ORTHO05D008073 2.1e-171 606.3 494 64.2
Aa31sc20G120 Aethionema arabicum HOM05D006573 ORTHO05D008073 3.5e-171 605.5 376 75.3
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 1.3e-170 603.6 489 63.2
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 1.5e-169 600.1 376 75.8
Actinidia06814 Actinidia chinensis HOM05D006573 ORTHO05D008073 5.7e-169 598.2 490 63.3
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 2.2e-168 596.3 376 76.1
FAN14G5930 Fragaria x ananassa HOM05D006573 ORTHO05D008073 2.2e-168 596.3 408 71.6
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 2.8e-168 595.9 497 61.8
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 8.2e-168 594.3 373 73.7
AT1G08550 Arabidopsis thaliana HOM05D006573 ORTHO05D008073 1.1e-167 594.0 377 78.2
FvH4_6g01130 Fragaria vesca HOM05D006573 ORTHO05D008073 1.1e-167 594.0 408 71.1
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 2.4e-167 592.8 462 64.5
FAN09G4254 Fragaria x ananassa HOM05D006573 ORTHO05D008073 3.1e-167 592.4 408 70.8
Lj1g0015745 Lotus japonicus HOM05D006573 ORTHO05D008073 4.1e-167 592.0 370 76.2
Atru.chr2.1254 Acer truncatum HOM05D006573 ORTHO05D008073 5.3e-167 591.7 489 63.0
Lj2A407T38 Lonicera japonica HOM05D006573 ORTHO05D008073 6.9e-167 591.3 380 77.1
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 6.9e-167 591.3 431 66.8
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 1.5e-166 590.1 456 63.6
Sc09g0001730 Simmondsia chinensis HOM05D006573 ORTHO05D008073 2.0e-166 589.7 374 75.4
Ciclev10019925m.g Citrus clementina HOM05D006573 ORTHO05D008073 3.4e-166 589.0 447 65.3
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 5.9e-166 588.2 459 66.0
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 1.3e-165 587.0 456 66.0
Sabra13G0048100 Salix brachista HOM05D006573 ORTHO05D008073 1.7e-165 586.6 534 59.0
Carub.0001s0791 Capsella rubella HOM05D006573 ORTHO05D008073 2.2e-165 586.3 377 77.2
Nitab4.5_0012098g0010 Nicotiana tabacum HOM05D006573 ORTHO05D008073 2.2e-165 586.3 373 75.3
PGSC0003DMG400010688 Solanum tuberosum HOM05D006573 ORTHO05D008073 8.5e-165 584.3 496 61.1
AUR62005294 Chenopodium quinoa HOM05D006573 ORTHO05D008073 1.1e-164 583.9 387 73.1
Nitab4.5_0000344g0030 Nicotiana tabacum HOM05D006573 ORTHO05D008073 1.1e-164 583.9 373 74.8
CAN.G29.20 Capsicum annuum HOM05D006573 ORTHO05D008073 1.9e-164 583.2 419 67.8
Sopen04g022050 Solanum pennellii HOM05D006573 ORTHO05D008073 9.4e-164 580.9 501 62.3
TWI34G1215 Tripterygium wilfordii HOM05D006573 ORTHO05D008073 9.4e-164 580.9 492 63.0
Solyc04g050930.3 Solanum lycopersicum HOM05D006573 ORTHO05D008073 2.1e-163 579.7 442 67.6
HPP92_020222 Vanilla planifolia HOM05D001545 ORTHO05D001600 4.6e-163 578.6 376 71.8
EL10Ac4g09803 Beta vulgaris HOM05D006573 ORTHO05D008073 7.9e-163 577.8 392 72.2
Gohir.A11G241000 Gossypium hirsutum HOM05D006573 ORTHO05D008073 1.4e-162 577.0 491 62.1
Migut.F02066 Erythranthe guttata HOM05D006573 ORTHO05D008073 5.1e-162 575.1 373 74.3
AUR62000660 Chenopodium quinoa HOM05D006573 ORTHO05D008073 6.7e-162 574.7 387 72.1
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 1.5e-161 573.5 365 74.5
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 2.5e-161 572.8 400 72.0
BcaB07g34098 Brassica carinata HOM05D006573 ORTHO05D008073 3.3e-161 572.4 387 72.9
CSS0039030 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 5.7e-161 571.6 489 60.7
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 1.7e-160 570.1 365 74.0
MSTRG.8177 Avicennia marina HOM05D006573 ORTHO05D008073 2.8e-160 569.3 366 76.8
SGA_v2.0_scaffold13G06342 Striga asiatica HOM05D006573 ORTHO05D008073 6.3e-160 568.2 369 73.2
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 8.2e-160 567.8 370 76.2
ECA248G2645 Erigeron canadensis HOM05D006573 ORTHO05D008073 3.1e-159 565.8 380 74.7
HanXRQChr13g0406621 Helianthus annuus HOM05D006573 ORTHO05D008073 5.9e-158 561.6 363 73.8
Peaxi162Scf01011g00215 Petunia axillaris HOM05D006573 ORTHO05D008073 1.7e-157 560.1 350 76.6
Oeu054601.1 Olea europaea HOM05D006573 ORTHO05D008073 2.2e-157 559.7 406 70.7
Lj2A405T39 Lonicera japonica HOM05D006573 ORTHO05D008073 3.8e-157 558.9 371 72.0
CiPaw.07G075700 Carya illinoinensis HOM05D006573 ORTHO05D008073 1.4e-156 557.0 376 71.0
DCAR_013654 Daucus carota HOM05D006573 ORTHO05D008073 8.8e-154 547.7 405 67.2
Hund07152 Selenicereus undatus HOM05D006573 ORTHO05D008073 6.3e-152 541.6 363 74.9
Lsat_1_v5_gn_7_62281 Lactuca sativa HOM05D006573 ORTHO05D008073 1.2e-150 537.3 428 63.3
Ah.06g188810 Amaranthus hybridus HOM05D006573 ORTHO05D008073 5.2e-146 521.9 375 70.4
vmacro12852 Vaccinium macrocarpon HOM05D006573 ORTHO05D008073 6.7e-146 521.5 581 50.8
ClCG11G010060 Citrullus lanatus HOM05D006573 ORTHO05D008073 5.7e-145 518.5 344 71.5
CsaV3_2G010250 Cucumis sativus L. HOM05D006573 ORTHO05D008073 7.5e-145 518.1 309 76.1
MELO3C008677.2 Cucumis melo HOM05D006573 ORTHO05D008073 8.2e-144 514.6 393 67.9
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 4.1e-143 512.3 373 70.8
Sed0012720 Sechium edule HOM05D006573 ORTHO05D008073 1.2e-142 510.8 374 69.8
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 1.6e-142 510.4 373 70.8
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 2.9e-141 506.1 370 65.7
Rhsim10G0138000 Rhododendron simsii HOM05D006573 ORTHO05D008073 3.8e-141 505.8 392 65.3
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 4.0e-138 495.7 355 65.6
COL.COLO4_20557 Corchorus olitorius HOM05D006573 ORTHO05D008073 2.0e-137 493.4 286 80.1
AagrBONN_evm.TU.Sc2ySwM_228.1660 Anthoceros agrestis HOM05D006573 ORTHO05D008073 8.3e-136 488.0 376 66.0
SMO270G0104 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 8.8e-130 468.0 339 65.8
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 7.0e-127 458.4 419 56.3
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 2.7e-118 429.9 357 57.7
CDE05G0621 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 2.3e-117 426.8 246 78.5
SEGI_19143 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 8.6e-109 398.3 291 61.9
Hma1.2p1_0123F.1_g058020 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 7.8e-102 375.2 320 60.6
Os04g0379700 Oryza sativa ssp. japonica HOM05D006573 ORTHO05D008073 9.5e-100 368.2 244 70.1
Lj2C408T2 Lonicera japonica HOM05D006573 ORTHO05D008073 1.4e-98 364.4 373 56.8
unitig_46.g17980 Utricularia gibba HOM05D006573 ORTHO05D008073 7.8e-94 348.6 204 78.4
PGSC0003DMG400010690 Solanum tuberosum HOM05D006573 ORTHO05D008073 5.4e-79 299.3 226 63.3
SMO297G0027 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 5.8e-73 279.3 204 59.3
SMO334G0031 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 7.6e-73 278.9 204 58.8
PRCOL_00001224 Prasinoderma coloniale HOM05D006573 ORTHO05D008073 1.1e-71 275.0 301 46.5
SMO297G0014 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 1.4e-71 274.6 204 58.3
SMO270G0143 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 3.2e-71 273.5 204 57.4
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 5.1e-69 266.2 279 46.6
PGSC0003DMG400020993 Solanum tuberosum HOM05D006573 ORTHO05D008073 1.8e-53 214.5 210 52.4
unitig_46.g17981 Utricularia gibba HOM05D006573 ORTHO05D008073 3.1e-34 150.6 141 58.9
SMO266G0012 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 7.0e-34 149.4 98 62.2
Haze_04503 Corylus avellana HOM05D006573 ORTHO05D008073 5.2e-13 80.1 97 51.5
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 5.2e-13 80.1 267 22.8
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 1.3e-11 75.5 346 22.3
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 1.3e-11 75.5 283 23.7
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 2.2e-11 74.7 274 23.7
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 3.7e-11 73.9 281 24.2
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 8.3e-11 72.8 271 23.6
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 1.1e-10 72.4 272 21.3
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 3.1e-10 70.9 235 20.9
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 3.1e-10 70.9 276 22.5
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 9.2e-10 69.3 273 23.1
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 1.6e-09 68.6 282 22.0
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 3.5e-09 67.4 268 21.6
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 7.8e-09 66.2 160 23.1
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 7.8e-09 66.2 160 23.1
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 1.0e-08 65.9 137 26.3
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 2.3e-08 64.7 269 22.3
Haze_04505 Corylus avellana HOM05D006573 ORTHO05D008073 2.3e-08 64.7 88 47.7
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 2.9e-08 64.3 235 20.0


User provided reference genes

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