Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 6.4e-285 983.4 495 100.0
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 1.7e-261 905.6 464 98.9
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 9.2e-260 899.8 463 97.8
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 1.4e-223 779.6 463 83.2
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 1.0e-218 763.5 464 81.2
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 8.7e-218 760.4 463 81.2
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 1.9e-217 759.2 463 81.2
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 1.3e-216 756.5 451 83.6
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 1.6e-216 756.1 466 80.0
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 2.8e-216 755.4 434 86.2
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 3.7e-216 755.0 462 79.9
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 1.1e-215 753.4 463 80.6
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 1.8e-215 752.7 463 80.3
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 3.1e-215 751.9 469 80.4
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 3.1e-215 751.9 465 79.4
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 6.9e-215 750.7 463 79.0
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 2.0e-214 749.2 463 79.9
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 5.9e-214 747.7 463 80.8
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.3e-213 746.5 464 81.0
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 1.3e-213 746.5 464 81.0
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.7e-213 746.1 464 81.0
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 2.2e-213 745.7 463 79.5
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 3.8e-213 745.0 463 79.5
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.1e-212 743.4 463 80.1
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.1e-212 743.4 463 79.7
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.4e-212 743.0 463 79.9
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 3.2e-212 741.9 468 78.6
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 4.2e-212 741.5 463 79.0
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 9.4e-212 740.3 463 79.3
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 2.1e-211 739.2 460 80.0
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 3.6e-211 738.4 420 86.0
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 6.1e-211 737.6 463 79.3
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.0e-210 736.9 463 79.5
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 1.0e-210 736.9 463 79.0
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.3e-210 735.7 463 79.3
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 2.3e-210 735.7 419 85.9
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 3.0e-210 735.3 463 78.6
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 3.9e-210 734.9 465 79.1
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 5.1e-210 734.6 427 84.8
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 6.7e-210 734.2 471 78.3
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 6.7e-210 734.2 421 85.0
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 6.7e-210 734.2 467 78.6
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 6.7e-210 734.2 463 78.8
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 1.5e-209 733.0 464 79.1
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 2.0e-209 732.6 464 78.9
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 2.0e-209 732.6 464 79.3
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 2.0e-209 732.6 466 78.5
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 2.6e-209 732.3 428 84.6
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 3.3e-209 731.9 469 77.6
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 7.4e-209 730.7 463 79.3
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 7.4e-209 730.7 428 83.4
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 7.4e-209 730.7 428 83.4
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 9.7e-209 730.3 465 79.4
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 2.2e-208 729.2 420 84.5
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 2.8e-208 728.8 428 83.9
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.8e-208 728.8 467 78.4
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 4.8e-208 728.0 463 78.8
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 6.3e-208 727.6 413 85.7
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 6.3e-208 727.6 461 78.7
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 4.1e-207 724.9 468 76.9
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 4.1e-207 724.9 417 84.2
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 5.3e-207 724.5 468 76.9
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 5.3e-207 724.5 466 77.0
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 5.3e-207 724.5 467 78.2
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.3e-207 724.5 467 77.9
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 5.3e-207 724.5 429 82.5
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 5.3e-207 724.5 468 76.7
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 9.1e-207 723.8 463 77.1
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 2.0e-206 722.6 468 76.7
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.0e-205 720.3 466 76.6
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 1.7e-205 719.5 441 81.0
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 2.2e-205 719.2 427 82.7
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 2.9e-205 718.8 438 80.6
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 2.9e-205 718.8 438 80.6
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.9e-205 718.8 468 76.1
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 5.0e-205 718.0 487 74.9
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.0e-205 718.0 466 77.5
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 6.5e-205 717.6 438 80.6
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 6.5e-205 717.6 438 80.6
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 8.5e-205 717.2 466 77.5
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 2.5e-204 715.7 469 76.1
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 2.5e-204 715.7 469 76.1
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 2.5e-204 715.7 468 78.0
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 5.5e-204 714.5 513 71.2
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.6e-203 713.0 463 76.7
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 2.1e-203 712.6 472 76.9
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 4.7e-203 711.4 467 75.8
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 1.0e-202 710.3 412 85.2
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 1.0e-202 710.3 412 85.2
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.3e-202 709.1 444 78.8
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 1.5e-201 706.4 428 80.8
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 4.8e-200 701.4 467 75.4
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 8.2e-200 700.7 409 83.1
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 1.4e-199 699.9 419 79.7
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 2.4e-199 699.1 419 80.0
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 5.9e-198 694.5 409 82.6
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 1.3e-197 693.3 391 86.4
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 1.9e-196 689.5 438 78.1
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 5.2e-194 681.4 404 83.7
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 4.4e-193 678.3 482 72.2
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.2e-187 660.2 383 84.3
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 3.0e-186 655.6 383 84.1
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 3.7e-184 648.7 429 76.9
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 1.2e-182 643.7 420 75.0
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 1.2e-182 643.7 415 77.6
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 2.0e-182 642.9 469 69.9
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 1.7e-181 639.8 411 76.6
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 5.0e-181 638.3 470 69.8
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 1.9e-180 636.3 462 71.2
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 2.1e-179 632.9 464 70.7
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 6.1e-179 631.3 531 62.9
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 8.8e-178 627.5 437 71.6
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.2e-177 627.1 427 72.8
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 1.1e-175 620.5 413 74.6
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 5.4e-175 618.2 460 67.8
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 7.8e-174 614.4 429 70.6
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 5.6e-172 608.2 464 69.0
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 6.2e-163 578.2 453 68.2
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 3.7e-160 568.9 359 78.3
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 2.9e-152 542.7 591 53.1
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 2.1e-150 536.6 405 70.9
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 3.8e-144 515.8 427 59.0
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 4.6e-142 508.8 337 76.3
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 5.6e-140 501.9 330 77.0
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 2.5e-132 476.5 428 57.0
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 7.6e-121 438.3 370 60.0
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 4.9e-112 409.1 424 52.4
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 6.5e-112 408.7 261 77.8
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 2.4e-106 390.2 259 74.1
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 6.9e-106 388.7 431 50.3
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 1.4e-103 380.9 310 67.7
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 2.6e-81 307.0 173 88.4
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.4e-77 294.7 188 79.8
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 3.0e-77 293.5 415 41.9
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 5.4e-58 229.6 361 39.9
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 5.0e-56 223.0 136 75.0
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.3e-45 187.6 386 35.2
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 1.2e-44 185.3 117 76.9
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 2.4e-29 134.4 142 50.7
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 2.6e-28 131.0 72 83.3
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 2.4e-26 124.4 81 82.7
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 7.1e-26 122.9 68 85.3
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 9.0e-21 105.9 100 61.0
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 2.0e-20 104.8 76 69.7
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 7.6e-20 102.8 66 84.8
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 5.1e-16 90.1 296 27.4
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 2.1e-14 84.7 61 68.9
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 2.8e-14 84.3 59 76.3
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 1.2e-09 68.9 50 64.0
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 2.5e-07 61.2 80 41.2
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 2.8e-06 57.8 48 56.2
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 2.8e-06 57.8 48 56.2


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