Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6394 Papaver somniferum HOM05D005415 ORTHO05D006242 1.9e-56 222.2 108 100.0
Oeu030666.2 Olea europaea HOM05D005415 ORTHO05D006242 7.0e-11 70.9 56 67.9
BcaC04g23337 Brassica carinata HOM05D005415 ORTHO05D006242 2.6e-10 68.9 56 60.7
A09p08330 Brassica napus HOM05D005415 ORTHO05D006242 2.6e-10 68.9 56 60.7
C09p09400 Brassica napus HOM05D005415 ORTHO05D006242 2.6e-10 68.9 56 60.7
BolC9t53852H Brassica oleracea HOM05D005415 ORTHO05D006242 2.6e-10 68.9 56 60.7
BraA09t36482Z Brassica rapa HOM05D005415 ORTHO05D006242 2.6e-10 68.9 56 60.7
Atru.chr6.1849 Acer truncatum HOM05D005415 ORTHO05D006242 3.5e-10 68.6 56 66.1
MSTRG.22895 Avicennia marina HOM05D005415 ORTHO05D006242 3.5e-10 68.6 56 64.3
Aa31LG1G18400 Aethionema arabicum HOM05D005415 ORTHO05D006242 4.5e-10 68.2 56 60.7
AL8G40620 Arabidopsis lyrata HOM05D005415 ORTHO05D006242 4.5e-10 68.2 56 62.5
AT5G63540 Arabidopsis thaliana HOM05D005415 ORTHO05D006242 5.9e-10 67.8 56 60.7
BcaB04g19924 Brassica carinata HOM05D005415 ORTHO05D006242 7.7e-10 67.4 56 58.9
Carub.0008s2427 Capsella rubella HOM05D005415 ORTHO05D006242 7.7e-10 67.4 56 58.9
CARHR277400 Cardamine hirsuta HOM05D005415 ORTHO05D006242 7.7e-10 67.4 56 60.7
Thhalv10003815m.g Eutrema salsugineum HOM05D005415 ORTHO05D006242 7.7e-10 67.4 56 58.9
Sopen05g009520 Solanum pennellii HOM05D005415 ORTHO05D006242 7.7e-10 67.4 56 64.3
Sopen12g001850 Solanum pennellii HOM05D005415 ORTHO05D006242 7.7e-10 67.4 56 64.3
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 7.7e-10 67.4 56 64.3
Dinv11193 Davidia involucrata HOM05D005415 ORTHO05D006242 1.0e-09 67.0 56 62.5
Duzib068G0666 Durio zibethinus HOM05D005415 ORTHO05D006242 1.0e-09 67.0 49 69.4
Lsat_1_v5_gn_4_82521 Lactuca sativa HOM05D005415 ORTHO05D006242 1.0e-09 67.0 56 64.3
THA.LOC104798938 Tarenaya hassleriana HOM05D005415 ORTHO05D006242 1.0e-09 67.0 56 62.5
Nitab4.5_0001213g0090 Nicotiana tabacum HOM05D005415 ORTHO05D006242 1.3e-09 66.6 56 64.3
Nitab4.5_0003683g0010 Nicotiana tabacum HOM05D005415 ORTHO05D006242 1.3e-09 66.6 56 64.3
Solyc05g014400.4 Solanum lycopersicum HOM05D005415 ORTHO05D006242 1.3e-09 66.6 56 64.3
CAN.G2034.2 Capsicum annuum HOM05D005415 ORTHO05D006242 1.7e-09 66.2 56 60.7
Gohir.D07G053600 Gossypium hirsutum HOM05D005415 ORTHO05D006242 1.7e-09 66.2 49 67.3
Gorai.001G056700 Gossypium raimondii HOM05D005415 ORTHO05D006242 1.7e-09 66.2 49 67.3
Nn4g22247 Nelumbo nucifera HOM05D005415 ORTHO05D006242 1.7e-09 66.2 56 62.5
Peaxi162Scf00047g00185 Petunia axillaris HOM05D005415 ORTHO05D006242 1.7e-09 66.2 56 64.3
Solyc12g005900.3 Solanum lycopersicum HOM05D005415 ORTHO05D006242 1.7e-09 66.2 56 62.5
TAR629G2415 Trochodendron aralioides HOM05D005415 ORTHO05D006242 1.7e-09 66.2 56 57.1
Sed0003726 Sechium edule HOM05D005415 ORTHO05D006242 2.2e-09 65.9 56 60.7
Cpa.g.sc4.162 Carica papaya HOM05D005415 ORTHO05D006242 2.9e-09 65.5 56 62.5
ClCG06G018070 Citrullus lanatus HOM05D005415 ORTHO05D006242 2.9e-09 65.5 56 62.5
DCAR_021639 Daucus carota HOM05D005415 ORTHO05D006242 2.9e-09 65.5 56 60.7
Gohir.A07G049320 Gossypium hirsutum HOM05D005415 ORTHO05D006242 2.9e-09 65.5 49 65.3
Lj9C481T20 Lonicera japonica HOM05D005415 ORTHO05D006242 2.9e-09 65.5 54 61.1
PSO017G0412 Papaver somniferum HOM05D005415 ORTHO05D006242 2.9e-09 65.5 51 68.6
Sabra15G0120800 Salix brachista HOM05D005415 ORTHO05D006242 2.9e-09 65.5 56 60.7
SalBow5G0795 Salvia bowleyana HOM05D005415 ORTHO05D006242 2.9e-09 65.5 47 66.0
Ciclev10031056m.g Citrus clementina HOM05D005415 ORTHO05D006242 3.8e-09 65.1 56 58.9
COL.COLO4_16633 Corchorus olitorius HOM05D005415 ORTHO05D006242 3.8e-09 65.1 49 69.4
PSO478G2612 Papaver somniferum HOM05D005415 ORTHO05D006242 3.8e-09 65.1 51 66.7
SGA_v2.0_scaffold414G51200 Striga asiatica HOM05D005415 ORTHO05D006242 3.8e-09 65.1 56 60.7
ECA232G0893 Erigeron canadensis HOM05D005415 ORTHO05D006242 5.0e-09 64.7 56 60.7
GSVIVG01008582001 Vitis vinifera HOM05D005415 ORTHO05D006242 5.0e-09 64.7 56 57.1
Manes.06G122000 Manihot esculenta HOM05D005415 ORTHO05D006242 6.5e-09 64.3 56 60.7
Psat7g037120 Pisum sativum HOM05D005415 ORTHO05D006242 6.5e-09 64.3 56 62.5
CSS0000208 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 8.5e-09 63.9 49 67.3
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 8.5e-09 63.9 57 61.4
HanXRQChr09g0273461 Helianthus annuus HOM05D005415 ORTHO05D006242 8.5e-09 63.9 56 60.7
MBI07_g01996_MAGBIO Magnolia biondii HOM05D005415 ORTHO05D006242 8.5e-09 63.9 56 58.9
Os04g0391000 Oryza sativa ssp. japonica HOM05D005415 ORTHO05D006242 8.5e-09 63.9 72 45.8
unitig_8.g4692 Utricularia gibba HOM05D005415 ORTHO05D006242 1.1e-08 63.5 56 58.9
CDE05G0217 Ceratophyllum demersum HOM05D005415 ORTHO05D006242 1.5e-08 63.2 56 57.1
MELO3C026191.2 Cucumis melo HOM05D005415 ORTHO05D006242 1.5e-08 63.2 56 58.9
CsaV3_1G000400 Cucumis sativus L. HOM05D005415 ORTHO05D006242 1.5e-08 63.2 56 58.9
Thecc.03G133700 Theobroma cacao HOM05D005415 ORTHO05D006242 1.5e-08 63.2 49 65.3
Potri.015G100200 Populus trichocarpa HOM05D005415 ORTHO05D006242 1.9e-08 62.8 56 58.9
Sp2g26630 Schrenkiella parvula HOM05D005415 ORTHO05D006242 1.9e-08 62.8 56 57.1
Aqoxy3G01618 Aquilegia oxysepala HOM05D005415 ORTHO05D006242 2.5e-08 62.4 56 58.9
Migut.I00557 Erythranthe guttata HOM05D005415 ORTHO05D006242 2.5e-08 62.4 56 58.9
RcHm_v2.0_Chr7g0189541 Rosa chinensis HOM05D005415 ORTHO05D006242 3.2e-08 62.0 56 55.4
Zm00001eb085270 Zea mays HOM05D005415 ORTHO05D006242 3.2e-08 62.0 47 57.4
Cfa018765 Carpinus fangiana HOM05D005415 ORTHO05D006242 4.2e-08 61.6 56 57.1
Haze_07175 Corylus avellana HOM05D005415 ORTHO05D006242 4.2e-08 61.6 56 57.1
VMungo0251G3541 Vigna mungo HOM05D005415 ORTHO05D006242 4.2e-08 61.6 56 60.7
EL10Ac5g11383 Beta vulgaris HOM05D005415 ORTHO05D006242 5.5e-08 61.2 56 57.1
Lalb_Chr13g0297171 Lupinus albus HOM05D005415 ORTHO05D006242 5.5e-08 61.2 56 55.4
CANSAT25G2590 Cannabis sativa HOM05D005415 ORTHO05D006242 7.2e-08 60.8 45 66.7
FvH4_1g26610 Fragaria vesca HOM05D005415 ORTHO05D006242 7.2e-08 60.8 56 55.4
FAN19G3201 Fragaria x ananassa HOM05D005415 ORTHO05D006242 7.2e-08 60.8 56 55.4
Actinidia18334 Actinidia chinensis HOM05D005415 ORTHO05D006242 9.4e-08 60.5 49 65.3
Actinidia25556 Actinidia chinensis HOM05D005415 ORTHO05D006242 9.4e-08 60.5 49 65.3
AUR62029576 Chenopodium quinoa HOM05D005415 ORTHO05D006242 1.2e-07 60.1 56 55.4
AUR62038846 Chenopodium quinoa HOM05D005415 ORTHO05D006242 1.2e-07 60.1 56 57.1
AUR62043951 Chenopodium quinoa HOM05D005415 ORTHO05D006242 1.2e-07 60.1 56 57.1
Sc10g0010570 Simmondsia chinensis HOM05D005415 ORTHO05D006242 1.2e-07 60.1 56 57.1
PGR083G0902 Punica granatum HOM05D005415 ORTHO05D006242 1.6e-07 59.7 45 62.2
QL10p002178 Quercus lobata HOM05D005415 ORTHO05D006242 2.1e-07 59.3 56 55.4
Phvul.002G284900 Phaseolus vulgaris HOM05D005415 ORTHO05D006242 2.7e-07 58.9 56 57.1
Prupe.5G147700 Prunus persica HOM05D005415 ORTHO05D006242 3.6e-07 58.5 55 54.5
FAN28G1156 Fragaria x ananassa HOM05D005415 ORTHO05D006242 4.7e-07 58.2 56 55.4
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 4.7e-07 58.2 55 54.5
Eucgr.B00088 Eucalyptus grandis HOM05D005415 ORTHO05D006242 6.1e-07 57.8 47 55.3
FAN26G2295 Fragaria x ananassa HOM05D005415 ORTHO05D006242 6.1e-07 57.8 56 53.6
CiPaw.13G052100 Carya illinoinensis HOM05D005415 ORTHO05D006242 8.0e-07 57.4 55 54.5
FAN23G0140 Fragaria x ananassa HOM05D005415 ORTHO05D006242 8.0e-07 57.4 56 55.4
Glyma.08G010700 Glycine max HOM05D005415 ORTHO05D006242 8.0e-07 57.4 56 55.4
ATR0582G259 Amborella trichopoda HOM05D005415 ORTHO05D006242 1.4e-06 56.6 47 57.4
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 1.4e-06 56.6 56 55.4
Medtr8g096570 Medicago truncatula HOM05D005415 ORTHO05D006242 1.4e-06 56.6 56 55.4
TPR.G12905 Trifolium pratense HOM05D005415 ORTHO05D006242 1.8e-06 56.2 56 57.1
Ca_17566_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 3.0e-06 55.5 56 51.8
Ca_29727_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 3.0e-06 55.5 56 51.8
HPP92_021694 Vanilla planifolia HOM05D005415 ORTHO05D006242 8.8e-06 53.9 48 54.2


User provided reference genes

Program Settings