Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 6.5e-179 630.6 306 100.0
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 5.7e-151 537.7 306 82.7
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 2.4e-149 532.3 306 81.7
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.5e-148 528.5 306 82.7
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.5e-146 523.1 306 81.4
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 7.2e-146 520.8 304 80.9
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 9.4e-146 520.4 306 80.1
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.1e-145 519.2 304 80.3
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 3.6e-145 518.5 306 81.0
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 5.2e-144 514.6 306 79.4
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 5.2e-144 514.6 295 80.3
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 2.6e-143 512.3 304 78.6
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 2.6e-143 512.3 306 78.4
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.3e-143 511.9 304 79.6
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 5.7e-143 511.1 290 82.1
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 9.7e-143 510.4 298 79.2
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 9.7e-143 510.4 297 80.1
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.7e-142 509.6 303 78.5
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.2e-142 509.2 304 78.6
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.8e-142 508.8 306 78.8
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 3.7e-142 508.4 299 78.6
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 4.8e-142 508.1 299 78.9
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 8.2e-142 507.3 298 78.9
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.1e-141 506.9 304 78.6
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.4e-141 506.5 295 79.7
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 2.4e-141 505.8 298 78.5
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 2.4e-141 505.8 306 78.1
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.4e-141 505.8 306 78.1
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 4.1e-141 505.0 300 77.0
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 9.1e-141 503.8 300 77.0
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 2.0e-140 502.7 306 76.8
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 3.5e-140 501.9 306 77.8
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 4.5e-140 501.5 307 79.5
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 5.9e-140 501.1 304 78.3
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 7.7e-140 500.7 300 78.7
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.3e-139 500.0 298 77.2
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.3e-139 500.0 298 77.2
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.3e-139 500.0 299 77.3
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.7e-139 499.6 300 78.0
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.7e-139 499.6 297 77.4
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.8e-139 498.4 298 76.8
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 5.0e-139 498.0 306 77.1
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 8.5e-139 497.3 298 76.5
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.9e-138 496.1 298 76.5
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 3.2e-138 495.4 317 73.8
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 3.2e-138 495.4 306 76.8
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 9.4e-138 493.8 300 77.7
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 9.4e-138 493.8 300 77.7
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.6e-137 493.0 319 74.0
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 2.1e-137 492.7 298 75.2
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 8.0e-137 490.7 300 76.7
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.0e-136 488.8 301 77.7
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 4.4e-135 485.0 295 75.3
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 9.8e-135 483.8 295 75.3
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.7e-134 483.0 295 75.9
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.8e-134 482.3 298 74.8
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 4.8e-134 481.5 321 73.2
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 6.3e-134 481.1 295 74.9
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.1e-133 480.3 298 73.2
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 3.1e-133 478.8 295 74.9
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 4.1e-133 478.4 295 75.6
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 7.0e-133 477.6 295 75.6
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.0e-132 476.1 295 75.3
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 7.7e-132 474.2 354 66.1
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 7.7e-132 474.2 295 74.9
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.3e-131 473.4 296 72.6
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.7e-131 473.0 295 74.9
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.7e-131 473.0 295 74.9
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 3.8e-131 471.9 300 71.3
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 5.0e-131 471.5 312 72.1
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 5.0e-131 471.5 300 72.7
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 1.1e-130 470.3 298 71.5
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.1e-130 470.3 277 79.1
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.9e-130 469.5 296 72.0
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.9e-130 469.5 294 72.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 2.5e-130 469.2 312 70.5
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 3.3e-130 468.8 296 72.6
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.2e-130 468.4 298 70.8
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 5.5e-130 468.0 334 67.7
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 2.8e-129 465.7 300 73.0
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.7e-129 464.9 298 73.2
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 8.0e-129 464.2 305 72.1
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 2.6e-127 459.1 320 69.1
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 9.8e-127 457.2 305 72.8
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.2e-126 456.1 297 71.4
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 4.9e-126 454.9 290 71.7
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.8e-125 453.0 295 71.9
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.9e-122 443.0 260 78.5
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.5e-122 442.6 300 69.0
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 2.8e-121 439.1 265 75.5
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 1.0e-120 437.2 288 70.1
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 9.2e-117 424.1 298 68.8
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 6.0e-116 421.4 297 67.3
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 7.5e-103 377.9 221 76.5
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 5.4e-101 371.7 290 58.3
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.7e-99 366.7 283 60.1
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 3.6e-97 359.0 206 81.1
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 8.1e-97 357.8 299 57.2
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 7.1e-93 344.7 287 57.5
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 4.6e-92 342.0 190 80.0
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.1e-84 316.6 192 74.0
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.9e-77 293.5 184 73.9
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.6e-71 273.1 167 74.9
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 7.6e-71 271.6 263 51.3
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 4.2e-61 239.2 142 78.2
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.9e-59 232.6 152 69.1
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 3.2e-53 213.0 148 69.6
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.1e-50 204.5 142 72.5
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 2.2e-41 173.7 117 72.6
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 4.5e-39 166.0 108 74.1
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 2.5e-29 133.7 91 72.5
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 5.5e-29 132.5 77 83.1
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.6e-28 131.0 117 59.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 9.8e-26 121.7 72 79.2
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 9.8e-26 121.7 299 27.8
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 3.1e-24 116.7 335 26.6
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.0e-23 114.0 73 68.5
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 2.7e-23 113.6 324 26.2
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 6.1e-12 75.9 41 80.5


User provided reference genes

Program Settings