Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 1.4e-41 172.6 86 100.0
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 7.2e-19 97.1 99 57.6
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.2e-18 96.3 97 58.8
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 9.1e-14 80.1 100 45.0
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.2e-13 79.7 90 48.9
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.0e-13 79.0 92 50.0
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 2.0e-13 79.0 91 48.4
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 4.5e-13 77.8 99 45.5
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 5.9e-13 77.4 102 44.1
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 5.9e-13 77.4 91 48.4
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.7e-12 75.9 95 48.4
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.7e-12 75.9 96 45.8
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 1.7e-12 75.9 104 41.3
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.3e-12 75.5 90 50.0
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 2.3e-12 75.5 90 47.8
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 2.3e-12 75.5 98 42.9
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.9e-12 75.1 90 46.7
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 2.9e-12 75.1 89 48.3
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 2.9e-12 75.1 92 45.7
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.9e-12 75.1 94 48.9
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 3.8e-12 74.7 90 48.9
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 5.0e-12 74.3 91 48.4
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 5.0e-12 74.3 91 46.2
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 5.0e-12 74.3 90 47.8
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 6.6e-12 73.9 90 46.7
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 6.6e-12 73.9 91 46.2
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 6.6e-12 73.9 90 48.9
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 8.6e-12 73.6 91 47.3
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 8.6e-12 73.6 91 47.3
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 8.6e-12 73.6 89 48.3
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.1e-11 73.2 91 45.1
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.5e-11 72.8 91 47.3
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.5e-11 72.8 91 48.4
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.5e-11 72.8 93 46.2
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.5e-11 72.8 96 45.8
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.5e-11 72.8 90 45.6
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.5e-11 72.8 91 46.2
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.5e-11 72.8 91 46.2
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.9e-11 72.4 91 46.2
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.9e-11 72.4 89 46.1
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.9e-11 72.4 92 44.6
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.9e-11 72.4 90 47.8
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.5e-11 72.0 90 45.6
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.3e-11 71.6 91 44.0
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.3e-11 71.6 91 44.0
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 3.3e-11 71.6 90 45.6
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 3.3e-11 71.6 90 45.6
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.3e-11 71.6 97 41.2
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.3e-11 71.6 97 41.2
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 3.3e-11 71.6 91 44.0
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 4.2e-11 71.2 91 46.2
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 4.2e-11 71.2 92 43.5
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 5.5e-11 70.9 96 44.8
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 5.5e-11 70.9 89 47.2
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 5.5e-11 70.9 89 47.2
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 7.2e-11 70.5 91 44.0
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 9.5e-11 70.1 91 45.1
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.5e-11 70.1 91 45.1
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.5e-11 70.1 91 45.1
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.2e-10 69.7 90 46.7
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.2e-10 69.7 90 46.7
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.2e-10 69.7 91 45.1
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.2e-10 69.7 91 45.1
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.2e-10 69.7 91 41.8
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.2e-10 69.7 91 41.8
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.2e-10 69.7 90 43.3
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.6e-10 69.3 91 45.1
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.6e-10 69.3 91 46.2
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.1e-10 68.9 90 44.4
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.1e-10 68.9 91 46.2
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.1e-10 68.9 88 44.3
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 2.8e-10 68.6 91 44.0
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 2.8e-10 68.6 91 42.9
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 3.6e-10 68.2 90 47.8
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.6e-10 68.2 92 42.4
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 4.7e-10 67.8 90 45.6
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 4.7e-10 67.8 91 44.0
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 6.1e-10 67.4 90 46.7
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 6.1e-10 67.4 90 46.7
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 6.1e-10 67.4 101 43.6
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 6.1e-10 67.4 90 44.4
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 8.0e-10 67.0 102 42.2
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.4e-09 66.2 90 45.6
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.4e-09 66.2 88 44.3
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.8e-09 65.9 88 44.3
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.8e-09 65.9 89 42.7
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.8e-09 65.9 89 42.7
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.8e-09 65.9 90 44.4
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.8e-09 65.9 90 43.3
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.8e-09 65.9 91 42.9
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 2.3e-09 65.5 104 39.4
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 3.0e-09 65.1 89 46.1
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 3.0e-09 65.1 89 43.8
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 3.0e-09 65.1 91 42.9
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 4.0e-09 64.7 70 47.1
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.0e-09 64.7 91 42.9
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 4.0e-09 64.7 89 42.7
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 6.8e-09 63.9 89 41.6
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 8.9e-09 63.5 91 41.8
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 8.9e-09 63.5 89 44.9
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.2e-08 63.2 95 41.1
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 5.7e-08 60.8 91 38.5
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 5.7e-08 60.8 91 38.5
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.3e-07 59.7 81 42.0
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.1e-06 56.6 90 36.7
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.8e-06 55.8 90 38.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 3.1e-06 55.1 72 40.3
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.1e-06 55.1 90 34.4


User provided reference genes

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