Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4762 Papaver somniferum HOM05D005474 ORTHO05D006551 7.5e-247 856.7 415 100.0
PSO170G1345 Papaver somniferum HOM05D005474 ORTHO05D006551 5.6e-234 813.9 401 98.5
TAR629G2557 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.6e-159 566.6 404 69.3
Aqoxy7G00102 Aquilegia oxysepala HOM05D005474 ORTHO05D006551 8.8e-155 550.8 403 66.3
TAR374G0037 Trochodendron aralioides HOM05D005474 ORTHO05D006551 9.8e-154 547.4 406 66.3
Lj2C167G11 Lonicera japonica HOM05D005474 ORTHO05D006551 4.5e-151 538.5 401 67.3
CSS0001924 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 5.9e-151 538.1 402 65.9
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 2.2e-150 536.2 406 65.5
Actinidia22160 Actinidia chinensis HOM05D005474 ORTHO05D006551 5.0e-150 535.0 403 65.0
Cfa012014 Carpinus fangiana HOM05D005474 ORTHO05D006551 1.6e-148 530.0 405 64.9
GSVIVG01019532001 Vitis vinifera HOM05D005474 ORTHO05D006551 6.1e-148 528.1 401 64.3
Rhsim02G0243400 Rhododendron simsii HOM05D005474 ORTHO05D006551 1.4e-147 526.9 400 64.8
Haze_09055 Corylus avellana HOM05D005474 ORTHO05D006551 8.8e-147 524.2 404 64.4
vmacro11424 Vaccinium macrocarpon HOM05D005474 ORTHO05D006551 4.4e-146 521.9 431 62.4
MD14G1128900 Malus domestica HOM05D005474 ORTHO05D006551 8.3e-145 517.7 401 65.6
Prupe.5G120100 Prunus persica HOM05D005474 ORTHO05D006551 1.8e-144 516.5 401 65.3
QL02p030435 Quercus lobata HOM05D005474 ORTHO05D006551 4.1e-144 515.4 401 63.6
MD06G1107100 Malus domestica HOM05D005474 ORTHO05D006551 1.1e-141 507.3 401 64.3
CiPaw.11G121500 Carya illinoinensis HOM05D005474 ORTHO05D006551 2.5e-141 506.1 401 64.1
PGR042G2806 Punica granatum HOM05D005474 ORTHO05D006551 2.3e-139 499.6 404 59.7
CsaV3_5G001990 Cucumis sativus L. HOM05D005474 ORTHO05D006551 6.8e-139 498.0 400 62.8
MELO3C005754.2 Cucumis melo HOM05D005474 ORTHO05D006551 8.9e-139 497.7 410 60.7
RcHm_v2.0_Chr7g0194791 Rosa chinensis HOM05D005474 ORTHO05D006551 1.5e-138 496.9 408 62.5
Sed0020716 Sechium edule HOM05D005474 ORTHO05D006551 5.7e-138 495.0 400 62.5
ATR0602G179 Amborella trichopoda HOM05D005474 ORTHO05D006551 2.2e-137 493.0 438 58.0
HPP92_026770 Vanilla planifolia HOM05D005474 ORTHO05D006551 1.8e-136 490.0 404 59.9
Cc08_g16070 Coffea canephora HOM05D005474 ORTHO05D006551 2.4e-136 489.6 400 60.2
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 3.2e-136 489.2 403 61.5
FvH4_5g04600 Fragaria vesca HOM05D005474 ORTHO05D006551 4.1e-136 488.8 403 62.0
Lalb_Chr05g0211531 Lupinus albus HOM05D005474 ORTHO05D006551 4.1e-136 488.8 400 61.2
Atru.chr9.1979 Acer truncatum HOM05D005474 ORTHO05D006551 5.4e-136 488.4 406 61.1
Atru.chr9.1994 Acer truncatum HOM05D005474 ORTHO05D006551 9.2e-136 487.6 406 61.1
CANSAT21G1635 Cannabis sativa HOM05D005474 ORTHO05D006551 1.6e-135 486.9 409 62.1
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.6e-135 486.9 403 61.8
FAN08G2748 Fragaria x ananassa HOM05D005474 ORTHO05D006551 2.0e-135 486.5 403 61.5
Potri.001G091600 Populus trichocarpa HOM05D005474 ORTHO05D006551 2.7e-135 486.1 409 59.2
ClCG01G001840 Citrullus lanatus HOM05D005474 ORTHO05D006551 3.5e-135 485.7 401 60.6
FAN04G1263 Fragaria x ananassa HOM05D005474 ORTHO05D006551 3.5e-135 485.7 403 61.3
Sabra01G0068000 Salix brachista HOM05D005474 ORTHO05D006551 1.0e-134 484.2 409 59.2
Sed0014344 Sechium edule HOM05D005474 ORTHO05D006551 1.0e-134 484.2 405 60.5
Potri.003G140000 Populus trichocarpa HOM05D005474 ORTHO05D006551 2.3e-134 483.0 404 60.4
Ciclev10020308m.g Citrus clementina HOM05D005474 ORTHO05D006551 3.0e-134 482.6 394 60.7
FAN13G0565 Fragaria x ananassa HOM05D005474 ORTHO05D006551 5.0e-134 481.9 403 61.3
Glyma.11G017200 Glycine max HOM05D005474 ORTHO05D006551 8.6e-134 481.1 402 59.5
Manes.01G049100 Manihot esculenta HOM05D005474 ORTHO05D006551 1.1e-133 480.7 407 59.0
Eucgr.D01738 Eucalyptus grandis HOM05D005474 ORTHO05D006551 4.3e-133 478.8 403 59.6
Nitab4.5_0002782g0080 Nicotiana tabacum HOM05D005474 ORTHO05D006551 4.3e-133 478.8 403 59.8
TWI56G1439 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 1.2e-132 477.2 406 58.1
Glyma.01G225700 Glycine max HOM05D005474 ORTHO05D006551 3.6e-132 475.7 403 59.1
VMungo1215G0769 Vigna mungo HOM05D005474 ORTHO05D006551 3.6e-132 475.7 400 59.5
CAN.G532.121 Capsicum annuum HOM05D005474 ORTHO05D006551 4.7e-132 475.3 405 59.3
Ca_24501_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 4.7e-132 475.3 403 59.1
Ca_29734_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 4.7e-132 475.3 403 59.1
SalBow1G1678 Salvia bowleyana HOM05D005474 ORTHO05D006551 1.0e-131 474.2 402 59.5
Psat2g185600 Pisum sativum HOM05D005474 ORTHO05D006551 1.8e-131 473.4 402 59.0
Duzib084G1138 Durio zibethinus HOM05D005474 ORTHO05D006551 3.1e-131 472.6 406 57.9
Sopen08g030580 Solanum pennellii HOM05D005474 ORTHO05D006551 4.0e-131 472.2 403 58.1
ECA240G1977 Erigeron canadensis HOM05D005474 ORTHO05D006551 5.2e-131 471.9 402 58.5
SalBow1G8106 Salvia bowleyana HOM05D005474 ORTHO05D006551 5.2e-131 471.9 402 59.2
Hund14220 Selenicereus undatus HOM05D005474 ORTHO05D006551 5.2e-131 471.9 407 57.2
Solyc08g082320.3 Solanum lycopersicum HOM05D005474 ORTHO05D006551 8.9e-131 471.1 403 57.8
Oeu063522.1 Olea europaea HOM05D005474 ORTHO05D006551 1.5e-130 470.3 409 58.2
Lsat_1_v5_gn_6_83981 Lactuca sativa HOM05D005474 ORTHO05D006551 2.0e-130 469.9 407 58.7
COL.COLO4_10702 Corchorus olitorius HOM05D005474 ORTHO05D006551 2.6e-130 469.5 400 56.5
SalBow8G3265 Salvia bowleyana HOM05D005474 ORTHO05D006551 4.4e-130 468.8 405 58.5
Phvul.002G164600 Phaseolus vulgaris HOM05D005474 ORTHO05D006551 5.8e-130 468.4 406 57.6
TPR.G25600 Trifolium pratense HOM05D005474 ORTHO05D006551 5.8e-130 468.4 402 58.7
Migut.E01253 Erythranthe guttata HOM05D005474 ORTHO05D006551 7.5e-130 468.0 406 59.1
PGSC0003DMG400012286 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.3e-129 467.2 404 56.9
Gohir.A12G236400 Gossypium hirsutum HOM05D005474 ORTHO05D006551 2.9e-129 466.1 400 57.2
TWI12G0204 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 2.9e-129 466.1 409 58.7
HanXRQChr03g0083521 Helianthus annuus HOM05D005474 ORTHO05D006551 3.7e-129 465.7 374 61.0
SGA_v2.0_scaffold144G35858 Striga asiatica HOM05D005474 ORTHO05D006551 3.7e-129 465.7 407 58.2
Gohir.D12G237600 Gossypium hirsutum HOM05D005474 ORTHO05D006551 8.3e-129 464.5 400 56.8
Gorai.008G254400 Gossypium raimondii HOM05D005474 ORTHO05D006551 1.4e-128 463.8 400 56.8
Thecc.03G298100 Theobroma cacao HOM05D005474 ORTHO05D006551 4.1e-128 462.2 407 56.5
Lalb_Chr16g0376951 Lupinus albus HOM05D005474 ORTHO05D006551 7.0e-128 461.5 397 58.4
AUR62019839 Chenopodium quinoa HOM05D005474 ORTHO05D006551 7.8e-127 458.0 403 55.8
Medtr5g009240 Medicago truncatula HOM05D005474 ORTHO05D006551 7.8e-127 458.0 403 58.6
arahy.Tifrunner.gnm1.ann1.Z0ACGZ Arachis hypogaea HOM05D005474 ORTHO05D006551 1.9e-125 453.4 467 51.0
Os06g0529800 Oryza sativa ssp. japonica HOM05D005474 ORTHO05D006551 2.5e-125 453.0 402 56.5
Zm00001eb277940 Zea mays HOM05D005474 ORTHO05D006551 9.5e-125 451.1 399 54.9
AUR62010840 Chenopodium quinoa HOM05D005474 ORTHO05D006551 2.1e-124 449.9 403 55.8
Cpa.g.sc128.67 Carica papaya HOM05D005474 ORTHO05D006551 1.1e-123 447.6 404 56.4
Peaxi162Scf00074g00931 Petunia axillaris HOM05D005474 ORTHO05D006551 4.0e-123 445.7 376 58.0
MSTRG.13885 Avicennia marina HOM05D005474 ORTHO05D006551 2.6e-122 443.0 445 51.9
CARHR231240 Cardamine hirsuta HOM05D005474 ORTHO05D006551 7.5e-122 441.4 400 54.8
unitig_0.g387 Utricularia gibba HOM05D005474 ORTHO05D006551 1.3e-121 440.7 407 57.0
arahy.Tifrunner.gnm1.ann1.1UFI8K Arachis hypogaea HOM05D005474 ORTHO05D006551 6.4e-121 438.3 495 48.1
CiPaw.12G083000 Carya illinoinensis HOM05D005474 ORTHO05D006551 8.3e-121 438.0 401 54.9
LjContig00312_ERROPOS870357g0016174 Lotus japonicus HOM05D005474 ORTHO05D006551 2.4e-120 436.4 399 56.4
Thhalv10025382m.g Eutrema salsugineum HOM05D005474 ORTHO05D006551 9.2e-120 434.5 400 52.2
Sc22g0005000 Simmondsia chinensis HOM05D005474 ORTHO05D006551 1.2e-119 434.1 397 55.2
THA.LOC104806435 Tarenaya hassleriana HOM05D005474 ORTHO05D006551 2.3e-118 429.9 402 54.0
EL10Ac5g12915 Beta vulgaris HOM05D005474 ORTHO05D006551 5.1e-118 428.7 435 50.1
Sp7g21810 Schrenkiella parvula HOM05D005474 ORTHO05D006551 5.1e-118 428.7 396 54.5
Sabra03G0101000 Salix brachista HOM05D005474 ORTHO05D006551 8.6e-118 427.9 509 47.2
Carub.0007s1727 Capsella rubella HOM05D005474 ORTHO05D006551 6.2e-116 421.8 405 52.1
Aa31LG6G7070 Aethionema arabicum HOM05D005474 ORTHO05D006551 2.3e-115 419.9 400 51.5
BcaNung01092 Brassica carinata HOM05D005474 ORTHO05D006551 1.3e-113 414.1 401 52.1
AL7G29500 Arabidopsis lyrata HOM05D005474 ORTHO05D006551 3.8e-113 412.5 417 48.4
Oeu034333.1 Olea europaea HOM05D005474 ORTHO05D006551 9.2e-112 407.9 361 56.2
AT4G23860 Arabidopsis thaliana HOM05D005474 ORTHO05D006551 7.8e-111 404.8 432 47.5
BraA01t01454Z Brassica rapa HOM05D005474 ORTHO05D006551 7.8e-111 404.8 401 50.6
BcaC09g50941 Brassica carinata HOM05D005474 ORTHO05D006551 2.5e-109 399.8 401 49.6
C01p19060 Brassica napus HOM05D005474 ORTHO05D006551 2.5e-109 399.8 401 49.6
A01p15160 Brassica napus HOM05D005474 ORTHO05D006551 4.3e-109 399.1 402 50.2
BolC1t01832H Brassica oleracea HOM05D005474 ORTHO05D006551 9.6e-109 397.9 404 49.0
MBI06_g08456_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 1.7e-105 387.1 302 61.6
Mapoly0095s0049 Marchantia polymorpha HOM05D005474 ORTHO05D006551 5.1e-102 375.6 406 47.0
Pp3c18_8230 Physcomitrium patens HOM05D005474 ORTHO05D006551 2.5e-101 373.2 395 46.8
Pp3c7_4800 Physcomitrium patens HOM05D005474 ORTHO05D006551 5.6e-101 372.1 422 48.8
Hma1.2p1_1746F.1_g300392 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 2.1e-100 370.2 327 58.1
Hma1.2p1_1746F.1_g300400 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 2.1e-100 370.2 327 58.1
CDE02G2859 Ceratophyllum demersum HOM05D002290 ORTHO05D002532 4.2e-96 355.9 245 68.2
SMO200G0193 Selaginella moellendorffii HOM05D005474 ORTHO05D006551 2.7e-95 353.2 402 44.5
Nn3g19016 Nelumbo nucifera HOM05D005474 ORTHO05D006551 1.4e-91 340.9 404 48.8
PGSC0003DMG401028714 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.2e-87 327.8 240 64.6
CSS0018913 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 1.5e-82 310.8 170 82.4
SEGI_30990 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 1.2e-74 284.6 402 39.1
TAR636G0569 Trochodendron aralioides HOM05D005474 ORTHO05D006551 1.2e-74 284.6 158 79.7
DCAR_027700 Daucus carota HOM05D005474 ORTHO05D006551 2.2e-73 280.4 404 42.1
CSS0034140 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 3.6e-71 273.1 141 83.7
CBR_g50475 Chara braunii HOM05D005474 ORTHO05D006551 3.9e-70 269.6 513 33.9
PSO017G5523 Papaver somniferum HOM05D005474 ORTHO05D006551 2.6e-66 256.9 121 91.7
CSS0004779 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 1.0e-65 255.0 144 81.2
CSS0021446 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 1.4e-43 181.4 91 83.5
PGSC0003DMG400011405 Solanum tuberosum HOM05D005474 ORTHO05D006551 4.4e-37 159.8 205 42.4
Duzib084G0281 Durio zibethinus HOM05D005474 ORTHO05D006551 6.1e-31 139.4 81 77.8
Hma1.2p1_1746F.1_g300390 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 8.0e-31 139.0 73 90.4
Hma1.2p1_1746F.1_g300398 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 8.0e-31 139.0 73 90.4
SEGI_08425 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 5.4e-27 126.3 66 84.8
unitig_0.g2293 Utricularia gibba HOM05D005474 ORTHO05D006551 7.0e-27 125.9 114 58.8
SHI06991 Sapria himalayana HOM05D005474 ORTHO05D006551 1.2e-23 115.2 59 83.1
CDE08G0829 Ceratophyllum demersum HOM05D005474 ORTHO05D006551 8.9e-22 109.0 66 77.3
Ah.07g197430 Amaranthus hybridus HOM05D005474 ORTHO05D006551 8.3e-20 102.4 153 39.2
Cfa025394 Carpinus fangiana HOM05D005474 ORTHO05D122676 3.9e-17 93.6 248 31.5
MBI18_g28764_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 1.4e-14 85.1 61 72.1


User provided reference genes

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