Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 2.8e-168 595.5 367 100.0
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 2.3e-151 539.3 366 93.7
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 4.0e-119 432.2 375 66.4
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 6.9e-119 431.4 369 67.2
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 1.4e-116 423.7 393 63.9
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.5e-113 413.7 358 66.2
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 3.7e-112 409.1 310 71.6
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 6.3e-112 408.3 369 66.9
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 1.1e-111 407.5 327 70.3
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 1.1e-111 407.5 327 70.3
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.1e-111 406.0 277 76.9
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.1e-111 406.0 277 76.9
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 3.1e-111 406.0 285 77.2
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 4.1e-111 405.6 326 73.9
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 4.1e-111 405.6 323 73.7
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 6.9e-111 404.8 286 76.9
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 1.5e-110 403.7 335 66.6
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 2.0e-110 403.3 284 76.8
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 3.4e-110 402.5 333 68.2
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 3.4e-110 402.5 313 71.6
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 5.9e-110 401.7 317 71.6
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 5.9e-110 401.7 322 70.2
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 1.0e-109 401.0 322 70.8
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.3e-109 400.6 312 69.9
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 2.2e-109 399.8 341 67.7
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 3.8e-109 399.1 285 75.1
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 6.5e-109 398.3 322 71.7
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 8.5e-109 397.9 321 71.0
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 1.4e-108 397.1 368 65.2
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 2.5e-108 396.4 293 73.0
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 3.2e-108 396.0 284 74.6
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.2e-108 395.6 275 75.6
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 5.5e-108 395.2 384 61.5
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 5.5e-108 395.2 325 71.7
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 7.2e-108 394.8 297 72.4
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.6e-107 393.7 285 73.3
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 1.6e-107 393.7 262 78.6
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 2.7e-107 392.9 310 69.0
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 6.1e-107 391.7 310 69.7
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 6.1e-107 391.7 267 76.8
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 1.0e-106 391.0 337 65.3
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 5.1e-106 388.7 314 68.5
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 6.7e-106 388.3 267 75.7
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.1e-105 387.5 368 60.6
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 1.5e-105 387.1 262 77.5
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 3.3e-105 386.0 331 65.9
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 4.3e-105 385.6 320 67.2
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 9.7e-105 384.4 324 66.0
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 1.6e-104 383.6 311 66.6
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 2.2e-104 383.3 321 67.0
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 2.2e-104 383.3 289 71.3
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 2.8e-104 382.9 329 69.6
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 2.8e-104 382.9 351 63.0
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 2.8e-104 382.9 333 64.9
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.7e-104 382.5 311 68.5
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.7e-104 382.5 311 68.5
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 3.7e-104 382.5 267 74.2
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 6.3e-104 381.7 265 76.2
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.3e-104 381.7 319 67.1
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 8.2e-104 381.3 357 62.5
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 1.1e-103 380.9 337 64.1
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.1e-103 380.9 287 70.4
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 2.4e-103 379.8 381 58.5
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 5.3e-103 378.6 292 71.2
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 9.1e-103 377.9 357 66.1
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 1.2e-102 377.5 314 68.8
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 1.5e-102 377.1 286 68.5
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 2.6e-102 376.3 318 67.6
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 3.4e-102 375.9 297 69.0
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 1.3e-101 374.0 333 62.2
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 6.5e-101 371.7 325 67.4
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 1.1e-100 370.9 264 70.8
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 1.1e-100 370.9 289 69.2
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 5.5e-100 368.6 329 64.1
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 1.6e-99 367.1 322 66.1
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 1.4e-98 364.0 267 72.3
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.5e-97 360.5 321 65.1
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 3.3e-97 359.4 323 64.4
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 7.4e-97 358.2 321 62.3
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 7.4e-97 358.2 286 66.8
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 9.7e-97 357.8 314 62.7
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 9.7e-97 357.8 411 57.9
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 2.2e-96 356.7 357 58.8
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 2.8e-96 356.3 370 56.2
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 2.8e-96 356.3 322 64.3
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 2.8e-96 356.3 320 64.1
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 8.2e-96 354.8 322 63.7
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 1.8e-95 353.6 323 64.1
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 5.3e-95 352.1 325 63.4
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 6.9e-95 351.7 319 63.6
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.4e-92 344.0 268 69.8
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 2.5e-92 343.2 245 73.1
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.3e-90 336.7 268 69.4
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 3.9e-90 335.9 364 54.7
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 5.2e-90 335.5 240 72.1
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 6.7e-90 335.1 372 57.3
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 9.7e-89 331.3 290 64.1
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 8.2e-88 328.2 295 60.3
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 7.0e-87 325.1 351 56.7
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 3.8e-85 319.3 368 53.8
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 6.5e-85 318.5 267 60.7
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 1.1e-84 317.8 291 58.1
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 6.7e-82 308.5 265 64.5
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.4e-79 300.1 266 58.3
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 7.0e-79 298.5 264 58.7
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.5e-78 295.8 224 71.9
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 4.5e-78 295.8 286 54.9
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 4.5e-78 295.8 286 54.9
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 2.9e-77 293.1 282 58.5
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 4.5e-70 269.2 261 53.3
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 2.9e-69 266.5 268 52.2
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 4.7e-67 259.2 259 51.4
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 5.4e-63 245.7 202 63.9
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.2e-59 234.6 334 47.9
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 2.1e-59 233.8 170 74.7
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.6e-59 233.0 182 69.2
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.6e-54 217.6 234 53.8
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 4.7e-51 206.1 319 47.3
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.5e-46 189.9 203 52.7
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.7e-40 171.0 116 75.0
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.3e-40 168.7 145 63.4
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-30 138.3 109 72.5
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 7.3e-28 129.0 110 57.3
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 3.8e-24 116.7 93 64.5
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 3.0e-21 107.1 101 64.4
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.0e-17 94.4 109 47.7
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 2.7e-14 84.0 62 62.9
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.6e-11 74.7 135 30.4
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 3.7e-11 73.6 295 27.1


User provided reference genes

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