Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 2.8e-114 415.2 203 100.0
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.6e-109 399.4 203 96.6
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 1.9e-70 269.6 223 61.0
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 8.1e-69 264.2 220 60.5
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 1.1e-68 263.8 218 60.1
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.4e-68 263.5 219 60.7
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 1.8e-68 263.1 219 60.7
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 3.1e-68 262.3 218 62.8
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 3.1e-68 262.3 212 61.8
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 8.9e-68 260.8 218 61.5
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 8.9e-68 260.8 217 58.1
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 3.4e-67 258.8 219 59.8
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 4.4e-67 258.5 215 60.9
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.3e-66 256.9 219 58.9
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 1.3e-66 256.9 158 72.2
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 1.7e-66 256.5 208 62.0
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 1.7e-66 256.5 208 62.0
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 1.7e-66 256.5 216 60.2
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 3.7e-66 255.4 216 60.2
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 3.7e-66 255.4 215 58.6
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 4.9e-66 255.0 219 59.8
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.4e-65 253.4 176 66.5
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 2.4e-65 252.7 215 59.5
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 2.4e-65 252.7 219 58.4
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 2.4e-65 252.7 217 59.0
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 4.1e-65 251.9 219 58.9
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 4.1e-65 251.9 217 59.4
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 4.1e-65 251.9 221 57.5
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 7.1e-65 251.1 218 56.9
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 7.1e-65 251.1 218 56.9
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 7.1e-65 251.1 160 70.6
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.6e-64 250.0 217 54.8
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 3.5e-64 248.8 161 70.2
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 3.5e-64 248.8 218 60.1
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 4.6e-64 248.4 217 58.1
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 7.8e-64 247.7 224 55.8
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.3e-63 246.9 204 59.8
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 1.7e-63 246.5 176 65.3
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 1.7e-63 246.5 160 70.0
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.3e-63 246.1 224 55.4
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 5.1e-63 245.0 220 57.7
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 6.6e-63 244.6 213 60.6
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.5e-62 243.4 215 57.7
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.9e-62 243.0 220 59.1
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 1.9e-62 243.0 218 56.9
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 2.5e-62 242.7 217 53.0
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.5e-62 242.7 218 57.3
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 2.5e-62 242.7 209 58.4
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 7.3e-62 241.1 214 56.5
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 2.8e-61 239.2 217 55.8
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 4.7e-61 238.4 215 56.7
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 4.7e-61 238.4 206 57.3
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 6.2e-61 238.0 218 57.3
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.1e-60 237.3 215 57.2
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.1e-60 237.3 215 56.7
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 1.1e-60 237.3 160 68.1
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 1.4e-60 236.9 161 68.3
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.4e-60 236.9 173 65.9
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 1.8e-60 236.5 207 57.0
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 1.8e-60 236.5 224 56.7
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 8.9e-60 234.2 214 55.6
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 8.9e-60 234.2 207 57.0
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 8.9e-60 234.2 198 60.1
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.5e-59 233.4 214 55.6
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 2.0e-59 233.0 214 55.6
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 2.6e-59 232.6 217 56.2
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 3.4e-59 232.3 158 67.7
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 5.8e-59 231.5 214 56.5
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 1.3e-58 230.3 206 58.3
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.7e-58 229.9 217 53.9
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 2.2e-58 229.6 207 53.6
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 2.9e-58 229.2 178 60.7
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 4.9e-58 228.4 168 63.7
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 6.4e-58 228.0 168 63.7
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 6.4e-58 228.0 168 63.7
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 6.4e-58 228.0 168 63.7
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 6.4e-58 228.0 178 61.2
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.9e-57 226.5 217 53.9
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.9e-57 226.5 204 56.9
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 4.2e-57 225.3 168 62.5
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 5.4e-57 224.9 161 64.6
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 9.3e-57 224.2 161 64.6
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 2.1e-56 223.0 214 54.2
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 3.5e-56 222.2 201 56.2
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 1.0e-55 220.7 208 54.3
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 2.1e-53 213.0 161 62.1
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 6.9e-52 208.0 157 58.0
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 1.2e-51 207.2 141 66.7
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.4e-49 200.3 159 60.4
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 2.1e-48 196.4 212 48.6
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.0e-47 194.1 192 51.6
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 2.1e-45 186.4 176 50.0
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 5.3e-44 181.8 173 52.0
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 7.9e-40 167.9 134 53.0
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 6.7e-39 164.9 142 57.0
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 7.4e-38 161.4 135 51.9
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 1.1e-36 157.5 227 41.9
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 8.4e-34 147.9 139 47.5
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 6.7e-31 138.3 135 48.9
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 6.3e-29 131.7 139 52.5
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.1e-25 120.9 143 49.7
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.4e-25 120.6 79 69.6
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.9e-25 120.2 143 39.2
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 1.1e-20 104.4 145 39.3
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 8.5e-18 94.7 52 76.9
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 8.8e-15 84.7 56 69.6
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 3.4e-11 72.8 44 75.0
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 1.9e-09 67.0 75 45.3


User provided reference genes

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