Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 1.2e-93 346.7 193 100.0
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 1.9e-80 302.8 185 92.4
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 2.4e-54 216.1 202 61.4
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 9.1e-54 214.2 203 59.1
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.0e-52 210.7 131 76.3
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.0e-52 210.7 131 76.3
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 1.3e-52 210.3 112 83.0
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 6.5e-52 208.0 119 79.8
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 3.2e-51 205.7 115 82.6
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 4.2e-51 205.3 187 58.3
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 1.2e-50 203.8 177 60.5
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.6e-50 203.4 186 59.1
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 2.7e-50 202.6 141 72.3
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 4.7e-50 201.8 190 57.4
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 8.0e-50 201.1 123 73.2
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.0e-49 200.7 182 58.8
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.0e-49 200.7 131 72.5
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 1.0e-49 200.7 122 71.3
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.4e-49 200.3 135 72.6
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 1.4e-49 200.3 115 80.0
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.8e-49 199.9 122 75.4
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.0e-49 198.7 125 74.4
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 4.0e-49 198.7 180 58.3
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 4.0e-49 198.7 189 56.6
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 4.0e-49 198.7 119 73.9
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 6.8e-49 198.0 125 71.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 6.8e-49 198.0 133 69.9
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 6.8e-49 198.0 185 58.4
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 8.8e-49 197.6 197 56.9
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 1.5e-48 196.8 123 77.2
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 2.0e-48 196.4 193 55.4
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.0e-48 196.4 107 82.2
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 2.6e-48 196.1 190 56.3
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.6e-48 196.1 126 73.0
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 4.4e-48 195.3 118 75.4
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 4.4e-48 195.3 198 55.6
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 5.7e-48 194.9 188 53.7
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 5.7e-48 194.9 192 57.8
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 9.7e-48 194.1 176 60.2
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 9.7e-48 194.1 192 57.8
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 1.3e-47 193.7 118 72.9
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.7e-47 193.4 162 61.7
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.7e-47 193.4 188 53.2
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 2.8e-47 192.6 121 73.6
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.8e-47 192.6 188 53.2
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.8e-47 192.6 108 82.4
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 3.7e-47 192.2 120 75.0
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.7e-47 192.2 117 75.2
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 6.3e-47 191.4 190 57.9
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 6.3e-47 191.4 182 56.6
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 6.3e-47 191.4 120 70.8
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 8.3e-47 191.0 123 69.1
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 8.3e-47 191.0 128 71.9
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.1e-46 190.7 131 68.7
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 1.4e-46 190.3 113 74.3
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 1.4e-46 190.3 110 76.4
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.4e-46 190.3 110 77.3
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.8e-46 189.9 192 54.2
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.8e-46 189.9 131 68.7
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 2.4e-46 189.5 121 72.7
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 5.3e-46 188.3 128 71.1
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 5.3e-46 188.3 125 68.0
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 9.1e-46 187.6 110 76.4
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 9.1e-46 187.6 110 75.5
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 9.1e-46 187.6 183 53.0
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.2e-45 187.2 110 74.5
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.2e-45 187.2 126 69.8
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 2.0e-45 186.4 110 74.5
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 2.0e-45 186.4 110 74.5
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 2.7e-45 186.0 110 73.6
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 2.7e-45 186.0 110 73.6
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 2.7e-45 186.0 110 73.6
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 2.7e-45 186.0 110 73.6
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 3.5e-45 185.7 108 79.6
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 4.5e-45 185.3 117 72.6
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.2e-44 183.0 182 56.6
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 2.2e-44 183.0 120 69.2
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 2.9e-44 182.6 107 76.6
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.9e-44 182.6 106 76.4
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.9e-44 182.6 189 55.6
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 2.9e-44 182.6 124 70.2
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.8e-44 182.2 126 65.1
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.5e-44 181.4 115 70.4
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 8.5e-44 181.0 190 51.6
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.1e-43 180.6 177 56.5
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 2.5e-43 179.5 181 58.6
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 3.2e-43 179.1 118 72.0
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 4.2e-43 178.7 112 74.1
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 4.2e-43 178.7 129 67.4
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 5.5e-43 178.3 118 72.0
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 9.4e-43 177.6 106 76.4
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 6.1e-42 174.9 108 72.2
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 7.5e-40 167.9 115 68.7
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.7e-36 156.8 103 67.0
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 2.9e-36 156.0 112 62.5
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.6e-34 150.2 93 71.0
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 4.7e-34 148.7 109 59.6
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 8.0e-34 147.9 136 55.9
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.8e-33 146.7 136 52.9
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 2.3e-33 146.4 105 62.9
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 2.3e-33 146.4 105 62.9
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 8.9e-33 144.4 118 55.1
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.2e-32 144.1 108 59.3
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.2e-32 144.1 106 60.4
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 2.6e-32 142.9 105 61.9
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 4.4e-32 142.1 105 61.0
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 5.7e-32 141.7 108 58.3
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 5.7e-32 141.7 127 54.3
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 7.5e-32 141.4 102 61.8
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.3e-31 140.6 114 55.3
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.3e-31 140.6 105 61.0
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 2.2e-31 139.8 130 51.5
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 2.8e-31 139.4 133 51.9
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.8e-31 139.4 108 59.3
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 2.8e-31 139.4 105 60.0
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.7e-31 139.0 132 52.3
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 4.9e-31 138.7 108 58.3
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 8.3e-31 137.9 105 58.1
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 8.3e-31 137.9 104 59.6
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.8e-30 136.7 107 57.9
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 2.4e-30 136.3 117 52.1
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.4e-30 136.3 127 52.0
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.2e-30 136.0 126 55.6
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.1e-30 135.6 168 45.2
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 5.4e-30 135.2 110 54.5
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 7.0e-30 134.8 139 50.4
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 9.2e-30 134.4 106 55.7
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 9.2e-30 134.4 106 55.7
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 9.2e-30 134.4 109 54.1
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.2e-29 134.0 102 58.8
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 2.0e-29 133.3 105 56.2
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 2.7e-29 132.9 106 56.6
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.7e-29 132.9 106 56.6
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 5.9e-29 131.7 108 53.7
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 7.8e-29 131.3 115 50.4
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.0e-28 131.0 108 52.8
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.3e-28 130.6 109 52.3
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.3e-28 130.6 106 53.8
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.7e-28 130.2 168 44.0
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.7e-28 130.2 168 44.0
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.9e-28 129.4 96 62.5
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 6.6e-28 128.3 108 54.6
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.5e-27 127.1 108 48.1
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.5e-27 127.1 65 87.7
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 7.3e-27 124.8 102 54.9
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 9.5e-27 124.4 109 51.4
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.6e-26 123.6 115 53.0
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 2.8e-26 122.9 63 84.1
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 3.6e-26 122.5 130 46.2
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 6.1e-26 121.7 104 57.7
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.8e-25 120.2 143 43.4
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 4.0e-25 119.0 107 50.5
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 4.0e-25 119.0 97 54.6
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.0e-24 116.7 111 46.8
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 9.8e-24 114.4 103 50.5
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.7e-23 113.6 140 40.7
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 4.9e-23 112.1 180 37.8
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.6e-21 107.1 136 39.7
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 2.0e-21 106.7 116 44.8
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 2.3e-20 103.2 223 31.4
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 1.1e-19 100.9 54 77.8
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 1.2e-18 97.4 59 69.5
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.2e-18 97.4 98 54.1
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 1.6e-18 97.1 119 47.9
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 1.1e-17 94.4 91 47.3
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.1e-17 94.4 246 28.5
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 4.0e-17 92.4 107 43.9
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 2.6e-16 89.7 62 61.3
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 3.9e-12 75.9 60 60.0
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 5.1e-12 75.5 78 48.7
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.8e-10 69.7 95 37.9
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 1.5e-08 63.9 47 59.6
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 1.7e-07 60.5 51 52.9
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 3.7e-07 59.3 48 52.1
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 8.4e-07 58.2 47 57.4
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 4.1e-06 55.8 50 52.0


User provided reference genes

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