Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 1.7e-247 859.0 476 100.0
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 1.7e-226 789.3 476 93.7
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 7.6e-118 428.3 468 58.8
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 6.4e-101 372.1 489 51.1
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 1.1e-100 371.3 464 53.7
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 8.7e-98 361.7 479 51.1
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 1.1e-97 361.3 414 51.7
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 1.9e-97 360.5 479 50.9
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 3.3e-97 359.8 482 51.5
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 5.6e-97 359.0 472 52.8
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 9.6e-97 358.2 473 51.6
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 2.1e-96 357.1 400 52.2
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 1.8e-95 354.0 475 51.4
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 5.8e-94 349.0 464 51.7
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 1.9e-92 344.0 474 51.5
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 3.2e-92 343.2 480 49.2
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 4.2e-92 342.8 463 51.0
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 1.2e-91 341.3 452 48.0
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.8e-90 337.4 467 52.9
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 1.8e-90 337.4 472 48.9
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 8.7e-90 335.1 476 50.4
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 1.1e-89 334.7 385 50.1
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 1.5e-89 334.3 471 51.2
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.5e-89 334.3 476 50.8
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 3.7e-88 329.7 475 50.1
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 1.1e-87 328.2 491 50.3
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 5.3e-87 325.9 472 48.5
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 9.0e-87 325.1 473 50.1
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 1.2e-86 324.7 479 48.0
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 4.5e-86 322.8 502 46.4
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 4.5e-86 322.8 472 48.1
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 1.0e-85 321.6 481 48.0
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 1.1e-84 318.2 405 47.2
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 1.4e-84 317.8 471 48.0
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 7.2e-84 315.5 483 48.2
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 2.7e-83 313.5 374 49.7
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 6.1e-83 312.4 464 48.3
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 7.9e-83 312.0 482 44.4
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 1.3e-82 311.2 516 44.2
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 1.3e-82 311.2 486 45.3
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 1.8e-82 310.8 488 45.9
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 3.9e-82 309.7 506 44.7
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 5.1e-82 309.3 489 48.3
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.5e-81 307.8 468 48.5
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 2.5e-81 307.0 371 49.9
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 3.7e-80 303.1 389 45.8
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 1.5e-78 297.7 395 46.3
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 1.5e-78 297.7 357 47.9
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 2.0e-78 297.4 497 45.7
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 5.9e-78 295.8 442 43.9
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 7.7e-78 295.4 483 47.2
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.0e-77 295.0 402 45.5
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 2.2e-77 293.9 512 39.8
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 1.1e-76 291.6 396 48.0
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 5.5e-76 289.3 489 44.6
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 1.0e-74 285.0 476 45.4
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 1.4e-74 284.6 461 44.5
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 1.8e-74 284.3 515 43.3
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 1.5e-73 281.2 558 40.3
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 2.6e-73 280.4 342 49.1
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 3.3e-73 280.0 418 43.3
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 1.7e-72 277.7 530 39.8
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 2.8e-72 276.9 410 42.4
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 4.8e-72 276.2 386 44.8
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 1.4e-71 274.6 440 42.3
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 4.1e-71 273.1 519 38.7
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 5.3e-71 272.7 272 55.5
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 6.9e-71 272.3 384 43.2
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 3.4e-70 270.0 382 44.5
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 1.3e-69 268.1 463 43.6
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 1.3e-69 268.1 463 43.6
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 3.8e-69 266.5 483 44.7
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 5.0e-69 266.2 445 44.5
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 1.4e-68 264.6 470 44.9
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 2.5e-68 263.8 278 50.7
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 5.5e-68 262.7 525 38.7
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.8e-66 257.7 361 45.2
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 5.2e-66 256.1 543 41.8
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 8.8e-66 255.4 496 43.1
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 7.4e-65 252.3 409 38.9
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 5.3e-63 246.1 389 41.1
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 4.5e-62 243.0 401 41.1
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 5.9e-62 242.7 505 43.8
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 1.2e-59 235.0 407 37.1
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 1.2e-57 228.4 283 45.9
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 4.2e-52 209.9 416 37.0
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 4.4e-49 199.9 319 40.4
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 5.7e-49 199.5 458 34.1
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.1e-47 195.3 401 34.4
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 1.6e-43 181.4 341 37.5
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 2.3e-42 177.6 388 35.1
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 4.0e-42 176.8 183 51.4
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 1.2e-38 165.2 281 37.7
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.9e-36 157.9 298 44.0
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 3.6e-35 153.7 284 46.8
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 1.0e-34 152.1 211 45.0
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 4.0e-34 150.2 284 37.7
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 2.0e-33 147.9 279 39.1
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 2.6e-33 147.5 248 36.7
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 3.9e-29 133.7 117 59.8
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 2.5e-28 131.0 155 45.8
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 4.3e-28 130.2 403 27.5
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 6.0e-22 109.8 107 52.3
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 4.7e-19 100.1 69 69.6
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 2.1e-14 84.7 134 41.0
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.3e-13 82.0 69 60.9
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 1.9e-12 78.2 73 63.0
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 3.6e-11 73.9 76 50.0
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 2.0e-09 68.2 192 43.8
Actinidia22110 Actinidia chinensis HOM05D005384 ORTHO05D006477 2.1e-06 58.2 111 34.2
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 2.1e-06 58.2 112 33.9
vmacro14142 Vaccinium macrocarpon HOM05D005384 ORTHO05D006477 2.1e-06 58.2 127 32.3
PSO063G3637 Papaver somniferum HOM05D005384 ORTHO05D006477 3.5e-06 57.4 303 24.4


User provided reference genes

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