Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 2.5e-215 751.9 405 100.0
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.4e-197 693.0 362 97.0
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.3e-139 500.4 403 65.8
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 4.0e-136 488.8 389 64.8
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 9.0e-136 487.6 387 66.1
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 2.2e-134 483.0 395 63.5
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.2e-132 477.2 395 63.0
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.1e-132 476.5 391 63.7
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 2.7e-132 476.1 400 63.0
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.7e-131 471.1 402 62.9
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.7e-131 471.1 395 62.3
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.9e-130 469.9 396 63.6
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 4.3e-130 468.8 395 62.3
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 1.6e-129 466.8 399 60.4
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.4e-128 463.8 400 62.0
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 2.4e-128 463.0 396 60.1
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 6.9e-128 461.5 396 59.6
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 9.0e-128 461.1 393 61.1
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 3.4e-127 459.1 396 59.3
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 9.9e-127 457.6 392 61.5
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.7e-126 456.8 392 60.7
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.2e-126 456.4 391 59.8
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.9e-126 456.1 392 60.7
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.9e-126 456.1 392 60.7
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 4.9e-126 455.3 397 62.2
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 6.4e-126 454.9 395 60.8
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 6.4e-126 454.9 391 59.8
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.1e-125 454.1 398 60.1
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 1.4e-125 453.8 396 60.1
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 1.4e-125 453.8 399 60.2
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.9e-125 453.4 398 59.8
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 9.3e-125 451.1 396 59.6
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 9.3e-125 451.1 397 61.0
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.2e-124 450.7 390 59.2
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.6e-124 450.3 396 59.6
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 2.1e-124 449.9 392 59.4
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.7e-124 449.5 394 61.9
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.0e-123 447.6 398 61.1
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.3e-123 447.2 397 60.7
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.3e-123 446.4 396 58.8
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 5.6e-122 441.8 401 57.6
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 9.6e-122 441.0 396 59.1
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 1.3e-121 440.7 396 58.3
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 2.1e-121 439.9 398 60.1
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 2.8e-121 439.5 384 60.2
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.8e-120 436.8 396 58.8
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.8e-120 436.8 398 59.3
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 4.0e-120 435.6 393 59.0
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 6.9e-120 434.9 401 57.1
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 3.4e-119 432.6 391 59.3
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 4.5e-119 432.2 397 58.7
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 7.6e-119 431.4 395 56.7
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-118 430.6 340 64.1
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 1.1e-117 427.6 408 55.1
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 9.3e-117 424.5 394 56.9
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 9.3e-117 424.5 394 58.4
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 1.2e-116 424.1 422 54.7
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.2e-116 424.1 367 60.8
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.0e-115 421.0 363 60.3
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.8e-115 420.2 392 58.7
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 1.8e-115 420.2 392 57.9
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 5.1e-115 418.7 395 57.7
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 6.7e-115 418.3 395 57.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.1e-114 417.5 390 57.9
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.5e-114 417.2 388 55.9
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 5.6e-114 415.2 392 58.2
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 3.7e-113 412.5 391 57.8
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 4.8e-113 412.1 422 51.7
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 6.2e-113 411.8 415 54.0
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 3.1e-112 409.5 403 58.1
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 2.9e-110 402.9 397 56.4
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 4.9e-110 402.1 355 56.3
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 3.2e-109 399.4 385 56.1
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 4.2e-109 399.1 372 56.7
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 5.5e-109 398.7 392 55.9
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 9.3e-109 397.9 397 55.9
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.6e-108 397.1 312 64.7
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 3.0e-107 392.9 348 59.2
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 3.9e-107 392.5 389 54.8
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.5e-106 390.6 392 55.6
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 4.3e-106 389.0 410 52.9
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.3e-105 387.5 387 54.5
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 2.2e-105 386.7 336 60.1
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 3.1e-104 382.9 398 51.8
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 4.5e-103 379.0 346 58.1
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 9.4e-101 371.3 443 49.0
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 4.6e-100 369.0 373 55.2
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.8e-99 367.1 395 52.9
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.5e-98 364.0 326 56.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.5e-95 354.0 450 43.6
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 4.5e-95 352.4 405 50.1
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 4.7e-92 342.4 422 45.3
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 6.7e-91 338.6 399 46.4
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-87 327.4 334 53.9
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.0e-86 322.4 341 52.8
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.5e-86 321.6 343 52.5
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.2e-85 318.5 302 57.0
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.7e-84 316.6 302 57.0
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.7e-84 316.6 302 57.0
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.7e-84 316.6 302 57.0
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 5.0e-78 295.8 345 51.0
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 6.5e-78 295.4 298 52.7
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.0e-74 283.9 286 55.6
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.8e-72 277.3 205 69.3
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.8e-67 260.8 225 60.9
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 4.5e-63 246.1 175 70.9
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.3e-62 244.6 256 51.6
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 1.5e-53 214.5 582 29.0
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 7.1e-32 142.5 205 42.0
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.6e-31 141.4 180 47.2
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.4e-26 123.2 123 52.8
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 7.6e-26 122.5 124 54.0
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.1e-23 114.4 164 40.9
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.6e-23 113.2 66 78.8
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 3.2e-08 63.9 40 72.5
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 8.7e-06 55.8 44 59.1


User provided reference genes

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