Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 3.2e-68 262.3 170 100.0
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 8.5e-37 157.9 157 60.5
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 2.7e-30 136.3 106 68.9
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 4.5e-30 135.6 107 69.2
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 5.9e-30 135.2 108 64.8
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 5.9e-30 135.2 96 74.0
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.3e-29 134.0 108 65.7
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.3e-29 134.0 112 66.1
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 5.0e-29 132.1 106 65.1
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 1.5e-28 130.6 94 72.3
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 2.5e-28 129.8 108 65.7
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 4.2e-28 129.0 99 69.7
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 7.2e-28 128.3 91 74.7
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 1.6e-27 127.1 114 61.4
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.6e-27 127.1 108 62.0
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 2.7e-27 126.3 91 70.3
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 2.7e-27 126.3 110 63.6
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 2.7e-27 126.3 106 67.0
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 4.7e-27 125.6 91 71.4
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 1.0e-26 124.4 99 65.7
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 1.4e-26 124.0 95 69.5
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 1.8e-26 123.6 108 63.9
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.8e-26 123.6 121 57.9
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 1.8e-26 123.6 116 62.9
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.8e-26 123.6 106 65.1
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 1.8e-26 123.6 106 64.2
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 2.3e-26 123.2 105 60.0
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 4.0e-26 122.5 92 67.4
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 4.0e-26 122.5 92 68.5
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 5.2e-26 122.1 99 69.7
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.2e-26 122.1 91 71.4
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 5.2e-26 122.1 106 63.2
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 6.8e-26 121.7 93 69.9
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 8.8e-26 121.3 93 69.9
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 8.8e-26 121.3 67 86.6
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 3.4e-25 119.4 93 72.0
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 7.5e-25 118.2 98 67.3
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 1.7e-24 117.1 96 67.7
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 2.8e-24 116.3 116 60.3
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 2.8e-24 116.3 96 65.6
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 3.7e-24 115.9 95 65.3
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 4.8e-24 115.5 104 63.5
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 6.3e-24 115.2 95 66.3
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 6.3e-24 115.2 114 60.5
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 8.3e-24 114.8 145 49.0
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 1.1e-23 114.4 111 61.3
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 1.1e-23 114.4 100 66.0
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.4e-23 114.0 108 63.0
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 2.4e-23 113.2 92 66.3
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 2.4e-23 113.2 69 78.3
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 2.4e-23 113.2 120 55.8
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 4.1e-23 112.5 106 57.5
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 1.2e-22 110.9 114 57.0
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.6e-22 110.5 63 85.7
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 1.6e-22 110.5 91 64.8
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 2.7e-22 109.8 71 78.9
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 3.5e-22 109.4 64 81.2
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 5.9e-22 108.6 97 62.9
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 5.9e-22 108.6 97 62.9
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 5.9e-22 108.6 109 56.9
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 5.9e-22 108.6 97 62.9
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 5.9e-22 108.6 105 58.1
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 5.9e-22 108.6 71 74.6
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 5.9e-22 108.6 63 82.5
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 7.7e-22 108.2 109 56.9
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 7.7e-22 108.2 105 60.0
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.0e-21 107.8 95 61.1
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 1.7e-21 107.1 80 70.0
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 1.7e-21 107.1 91 64.8
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 3.8e-21 105.9 63 84.1
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 3.8e-21 105.9 97 59.8
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 3.8e-21 105.9 134 49.3
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 8.5e-21 104.8 77 68.8
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 8.5e-21 104.8 106 57.5
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.1e-20 104.4 101 57.4
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.1e-20 104.4 91 61.5
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 1.5e-20 104.0 62 83.9
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 1.5e-20 104.0 62 83.9
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 2.5e-20 103.2 91 61.5
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 4.2e-20 102.4 86 68.6
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.2e-20 102.4 77 71.4
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 4.2e-20 102.4 67 74.6
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 5.5e-20 102.1 59 84.7
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 5.5e-20 102.1 104 56.7
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 2.1e-19 100.1 112 50.9
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 2.7e-19 99.8 114 52.6
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 6.1e-19 98.6 51 90.2
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.8e-18 97.1 52 84.6
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 2.3e-18 96.7 72 75.0
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 6.8e-18 95.1 92 59.8
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 2.6e-17 93.2 112 50.9
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 7.5e-17 91.7 77 64.9
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.7e-16 90.5 83 57.8
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 4.5e-14 82.4 116 45.7
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 8.3e-08 61.6 84 41.7


User provided reference genes

Program Settings