Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 2.8e-261 904.8 480 100.0
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 1.9e-249 865.5 481 96.0
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.2e-131 474.2 495 54.7
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.2e-131 474.2 495 54.7
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 1.8e-122 443.7 478 53.8
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 8.7e-122 441.4 484 51.0
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 4.3e-121 439.1 487 53.2
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 9.6e-121 438.0 486 49.4
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 4.8e-120 435.6 489 53.0
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.1e-119 434.5 420 58.8
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 3.1e-119 433.0 488 53.5
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 2.0e-118 430.3 491 49.5
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 4.5e-118 429.1 483 49.5
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 3.8e-117 426.0 477 49.5
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 6.5e-117 425.2 488 51.8
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 1.4e-116 424.1 481 50.3
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 1.4e-116 424.1 477 53.5
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.9e-116 423.7 477 53.5
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 3.2e-116 422.9 477 53.2
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 1.6e-115 420.6 489 49.3
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 2.7e-115 419.9 489 49.5
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 3.5e-115 419.5 490 48.0
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 6.1e-115 418.7 493 48.7
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 1.0e-114 417.9 483 49.9
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 1.8e-114 417.2 488 48.8
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 1.8e-114 417.2 480 49.4
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 3.0e-114 416.4 486 49.0
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 3.0e-114 416.4 485 49.5
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 3.0e-114 416.4 484 51.2
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 3.9e-114 416.0 481 48.4
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 5.1e-114 415.6 474 52.3
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 1.1e-111 407.9 489 47.9
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 1.4e-111 407.5 494 51.4
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 1.0e-109 401.4 476 48.7
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 1.3e-109 401.0 495 50.3
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 2.9e-109 399.8 497 48.3
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 6.5e-109 398.7 484 47.3
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 1.9e-108 397.1 482 45.9
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 1.9e-108 397.1 482 46.1
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 1.9e-108 397.1 481 52.0
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 3.2e-108 396.4 486 50.6
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 3.2e-108 396.4 479 47.4
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 5.5e-108 395.6 479 47.6
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 1.2e-107 394.4 421 50.8
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 2.1e-107 393.7 479 48.6
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 3.0e-106 389.8 483 46.8
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 8.8e-106 388.3 484 46.9
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 4.3e-105 386.0 480 47.7
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 5.7e-105 385.6 494 46.4
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 1.3e-104 384.4 482 50.8
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 1.4e-103 380.9 481 45.1
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 6.9e-103 378.6 488 49.8
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 6.9e-103 378.6 476 44.5
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 2.6e-102 376.7 490 46.5
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 1.4e-100 370.9 470 48.1
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 1.4e-100 370.9 486 47.7
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 2.5e-100 370.2 494 48.2
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 7.2e-100 368.6 483 45.3
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 1.2e-99 367.9 482 44.8
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 1.6e-99 367.5 479 49.5
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.1e-99 367.1 483 49.7
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 7.9e-99 365.2 486 47.7
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 5.1e-98 362.5 490 48.0
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 5.1e-98 362.5 411 50.9
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 6.7e-98 362.1 418 48.3
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 5.7e-97 359.0 481 47.8
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.7e-97 359.0 489 46.4
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 1.3e-96 357.8 485 48.9
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 1.7e-96 357.5 494 46.6
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 1.7e-96 357.5 490 44.1
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.1e-95 352.8 488 49.2
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.0e-94 350.5 481 48.6
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 2.6e-94 350.1 484 47.9
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 2.2e-93 347.1 499 42.5
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 3.8e-93 346.3 490 46.1
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 3.8e-93 346.3 490 46.1
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 5.0e-93 345.9 416 50.2
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.1e-92 344.7 364 52.5
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.9e-92 344.0 484 45.9
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.2e-91 341.3 486 43.8
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.7e-91 340.1 486 40.7
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 6.1e-91 339.0 485 42.3
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.4e-90 337.8 486 40.5
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 6.7e-90 335.5 505 42.6
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 8.8e-90 335.1 479 48.9
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 1.3e-88 331.3 502 41.8
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 1.7e-88 330.9 506 42.5
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.0e-86 323.9 487 45.0
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.3e-85 321.2 484 44.4
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 2.2e-85 320.5 487 39.4
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 5.0e-85 319.3 484 40.9
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.5e-85 318.9 490 42.4
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 8.5e-85 318.5 490 43.9
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 1.1e-84 318.2 495 41.4
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.7e-83 312.8 481 43.7
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 8.0e-83 312.0 502 38.8
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 8.0e-83 312.0 306 52.9
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 8.0e-83 312.0 479 42.8
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 8.8e-82 308.5 433 44.6
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.0e-81 307.4 495 38.2
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 7.0e-79 298.9 320 51.6
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 3.5e-78 296.6 413 43.1
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 3.5e-78 296.6 247 59.5
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.7e-77 294.3 378 45.8
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 8.5e-77 292.0 320 50.6
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 7.2e-76 288.9 508 38.6
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 8.0e-75 285.4 486 41.4
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 8.0e-75 285.4 486 41.4
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 2.3e-74 283.9 313 48.6
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 3.0e-74 283.5 481 38.3
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-73 281.6 484 42.4
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.4e-73 280.0 291 56.7
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 5.7e-73 279.3 443 40.9
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 9.8e-73 278.5 347 45.8
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 5.4e-71 272.7 511 37.6
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 7.0e-71 272.3 490 42.4
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 3.5e-70 270.0 339 51.0
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 1.9e-68 264.2 291 52.9
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 6.1e-67 259.2 266 53.0
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.8e-66 255.8 485 39.6
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 7.5e-65 252.3 375 44.5
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 7.5e-65 252.3 365 45.5
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 6.4e-64 249.2 486 35.6
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.6e-61 239.2 484 38.2
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 6.8e-58 229.2 237 57.8
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 9.2e-55 218.8 335 40.0
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.6e-53 212.6 293 40.3
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 1.5e-52 211.5 217 52.1
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 2.4e-47 194.1 298 41.3
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.7e-46 190.7 177 56.5
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.6e-46 189.9 156 64.7
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 4.0e-42 176.8 420 33.3
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.3e-37 161.8 241 38.6
ATR0589G064 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.7e-37 161.4 329 38.3
CSS0034270 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.1e-36 158.7 169 63.9
FAN05G3698 Fragaria x ananassa HOM05D004871 ORTHO05D005755 8.9e-34 149.1 160 61.9
TAR629G3424 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.2e-32 144.4 236 39.0
ATR0762G040 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.4e-31 141.7 292 39.4
FAN27G1866 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.9e-31 141.4 196 42.3
FAN09G0037 Fragaria x ananassa HOM05D004871 ORTHO05D005755 8.7e-29 132.5 134 55.2
BcaB07g32983 Brassica carinata HOM05D004871 ORTHO05D005755 7.3e-28 129.4 117 56.4
CSS0039002 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 3.6e-27 127.1 88 75.0
Solyc02g086440.4 Solanum lycopersicum HOM05D004871 ORTHO05D005755 6.9e-26 122.9 206 41.3
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.6e-22 111.7 152 43.4
HanXRQChr07g0188231 Helianthus annuus HOM05D004871 ORTHO05D005755 1.1e-20 105.5 149 37.6
CSS0033026 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 7.4e-20 102.8 72 73.6
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.4e-20 102.8 104 44.2
TAR314G0001 Trochodendron aralioides HOM05D004871 ORTHO05D005755 6.4e-16 89.7 125 40.8
FAN14G0631 Fragaria x ananassa HOM05D004871 ORTHO05D005755 9.3e-15 85.9 59 78.0
Nitab4.5_0007441g0020 Nicotiana tabacum HOM05D004871 ORTHO05D005755 2.5e-12 77.8 70 51.4
Glyma.14G200300 Glycine max HOM05D002125 ORTHO05D002105 2.6e-09 67.8 228 25.9
CANSAT54G1695 Cannabis sativa HOM05D002125 ORTHO05D002105 4.5e-09 67.0 231 24.7
TAR314G0006 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.8e-08 63.9 95 40.0
Psat3g054040 Pisum sativum HOM05D001219 ORTHO05D001017 7.1e-07 59.7 350 22.3
Psat3g054120 Pisum sativum HOM05D001219 ORTHO05D001017 9.3e-07 59.3 350 22.3
ClCG02G019190 Citrullus lanatus HOM05D002125 ORTHO05D002105 4.6e-06 57.0 219 22.4
MELO3C025685.2 Cucumis melo HOM05D002125 ORTHO05D002105 6.0e-06 56.6 219 23.3


User provided reference genes

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