Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0655 Papaver somniferum HOM05D008740 ORTHO05D006738 5.1e-145 517.7 255 100.0
PSO063G1165 Papaver somniferum HOM05D008740 ORTHO05D006738 9.5e-75 284.3 253 56.9
PSO017G3608 Papaver somniferum HOM05D008740 ORTHO05D006738 2.9e-68 262.7 253 51.8
PSO478G1479 Papaver somniferum HOM05D008740 ORTHO05D006738 1.2e-66 257.3 253 52.6
PSO478G5133 Papaver somniferum HOM05D008740 ORTHO05D006738 1.5e-64 250.4 254 50.0
PSO017G1214 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-61 239.2 239 51.5
PSO699G0051 Papaver somniferum HOM05D008740 ORTHO05D006738 3.0e-60 236.1 246 51.2
PSO339G1961 Papaver somniferum HOM05D008740 ORTHO05D006738 1.5e-56 223.8 216 52.8
PSO675G4489 Papaver somniferum HOM05D008740 ORTHO05D006738 2.6e-56 223.0 219 53.0
PSO478G3009 Papaver somniferum HOM05D008740 ORTHO05D006738 8.3e-55 218.0 218 49.1
PSO478G4901 Papaver somniferum HOM05D008740 ORTHO05D006738 9.2e-54 214.5 203 53.2
PSO063G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-53 213.8 254 46.1
PSO478G2639 Papaver somniferum HOM05D008740 ORTHO05D006738 7.8e-53 211.5 202 52.0
PSO675G0876 Papaver somniferum HOM05D008740 ORTHO05D006738 1.7e-52 210.3 236 48.3
PSO478G5192 Papaver somniferum HOM05D008740 ORTHO05D006738 8.6e-52 208.0 205 55.1
PSO017G4275 Papaver somniferum HOM05D008740 ORTHO05D006738 1.6e-45 187.2 205 48.3
PSO837G0046 Papaver somniferum HOM05D008740 ORTHO05D006738 8.6e-44 181.4 203 47.8
PSO170G6863 Papaver somniferum HOM05D008740 ORTHO05D006738 4.2e-38 162.5 171 48.5
PSO591G0052 Papaver somniferum HOM05D008740 ORTHO05D006738 3.0e-36 156.4 154 52.6
PSO017G1969 Papaver somniferum HOM05D008740 ORTHO05D006738 3.3e-35 152.9 175 46.9
PSO063G0429 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-32 142.9 255 34.9
PSO724G0332 Papaver somniferum HOM05D008740 ORTHO05D006738 5.8e-32 142.1 151 53.0
PSO017G7304 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-31 139.4 221 38.0
PSO541G3800 Papaver somniferum HOM05D008740 ORTHO05D006738 1.1e-30 137.9 228 39.9
PSO675G5251 Papaver somniferum HOM05D008740 ORTHO05D006738 9.3e-30 134.8 240 33.8
PSO478G1708 Papaver somniferum HOM05D000003 ORTHO05D006738 1.2e-29 134.4 146 48.6
PSO478G1834 Papaver somniferum HOM05D008740 ORTHO05D006738 2.1e-29 133.7 254 35.0
PSO339G3265 Papaver somniferum HOM05D008740 ORTHO05D006738 1.5e-27 127.5 197 37.6
PSO170G3818 Papaver somniferum HOM05D008740 ORTHO05D006738 3.3e-27 126.3 146 45.9
PSO357G0702 Papaver somniferum HOM05D008740 ORTHO05D006738 3.6e-26 122.9 221 34.8
PSO782G4427 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-25 120.2 257 31.9
PSO761G0259 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-24 116.3 190 37.9
PSO732G0569 Papaver somniferum HOM05D008740 ORTHO05D006738 4.5e-24 115.9 249 31.7
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 7.6e-24 115.2 255 29.8
PSO528G0097 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-23 114.4 255 31.0
PSO732G0669 Papaver somniferum HOM05D008740 ORTHO05D006738 1.3e-23 114.4 249 31.3
PSO339G4796 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-23 114.0 256 30.1
PSO339G4317 Papaver somniferum HOM05D007919 ORTHO05D006738 3.8e-23 112.8 251 30.7
PSO832G2737 Papaver somniferum HOM05D007919 ORTHO05D006738 3.8e-23 112.8 257 29.2
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 1.4e-22 110.9 265 28.3
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 3.2e-22 109.8 257 28.4
PSO170G5434 Papaver somniferum HOM05D007919 ORTHO05D006738 5.4e-22 109.0 253 27.7
PSO782G5603 Papaver somniferum HOM05D008740 ORTHO05D006738 1.6e-21 107.5 139 41.7
PSO754G0011 Papaver somniferum HOM05D008740 ORTHO05D006738 7.9e-21 105.1 155 40.0
PSO541G4887 Papaver somniferum HOM05D007919 ORTHO05D006738 1.0e-20 104.8 206 30.1
PSO478G4658 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-20 104.4 259 30.1
PSO170G5422 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-20 104.0 194 31.4
PSO478G2359 Papaver somniferum HOM05D007919 ORTHO05D006738 3.9e-20 102.8 214 30.8
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 3.9e-20 102.8 252 25.0
PSO478G3230 Papaver somniferum HOM05D008740 ORTHO05D006738 8.7e-20 101.7 167 38.3
PSO384G0598 Papaver somniferum HOM05D008740 ORTHO05D006738 1.5e-19 100.9 121 42.1
PSO675G4995 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-19 99.8 255 27.1
PSO782G1079 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-19 99.8 226 28.3
PSO832G0177 Papaver somniferum HOM05D008740 ORTHO05D006738 3.3e-19 99.8 176 36.9
PSO339G5774 Papaver somniferum HOM05D007919 ORTHO05D006738 5.6e-19 99.0 220 27.7
PSO017G4699 Papaver somniferum HOM05D007919 ORTHO05D006738 6.2e-18 95.5 254 27.6
PSO339G1049 Papaver somniferum HOM05D007919 ORTHO05D006738 6.2e-18 95.5 172 31.4
PSO461G0002 Papaver somniferum HOM05D007919 ORTHO05D006738 6.2e-18 95.5 256 28.9
PSO541G2695 Papaver somniferum HOM05D008740 ORTHO05D006738 6.2e-18 95.5 135 38.5
PSO210G7233 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-17 93.6 228 28.9
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-17 93.6 256 28.1
PSO478G3403 Papaver somniferum HOM05D008740 ORTHO05D006738 3.1e-17 93.2 195 30.3
PSO478G1651 Papaver somniferum HOM05D007919 ORTHO05D006738 4.0e-17 92.8 222 28.8
PSO782G1037 Papaver somniferum HOM05D000017 ORTHO05D000013 5.3e-17 92.4 116 40.5
PSO210G1893 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-16 91.3 248 27.8
PSO210G1365 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-16 90.9 200 30.0
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-16 90.1 251 27.1
PSO782G5696 Papaver somniferum HOM05D008740 ORTHO05D006738 2.6e-16 90.1 135 38.5
PSO339G5584 Papaver somniferum HOM05D007919 ORTHO05D006738 5.8e-16 89.0 252 26.6
PSO063G7010 Papaver somniferum HOM05D007919 ORTHO05D006738 1.0e-15 88.2 189 28.0
PSO017G1384 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-15 87.8 249 26.5
PSO170G6506 Papaver somniferum HOM05D007919 ORTHO05D006738 2.9e-15 86.7 207 26.6
PSO210G6357 Papaver somniferum HOM05D008740 ORTHO05D006738 2.9e-15 86.7 146 36.3
PSO764G0105 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-14 84.7 200 29.0
PSO210G5373 Papaver somniferum HOM05D007919 ORTHO05D006738 4.2e-14 82.8 210 30.5
PSO541G3792 Papaver somniferum HOM05D007919 ORTHO05D006738 5.5e-14 82.4 252 25.4
PSO063G2448 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-13 81.3 207 27.5
PSO339G1538 Papaver somniferum HOM05D008740 ORTHO05D006738 1.6e-13 80.9 109 39.4
PSO170G2360 Papaver somniferum HOM05D008740 ORTHO05D006738 7.9e-13 78.6 117 35.0
PSO210G1764 Papaver somniferum HOM05D007919 ORTHO05D006738 7.9e-13 78.6 150 31.3
PSO170G1038 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-12 77.8 215 27.0
PSO478G0556 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-12 77.4 195 29.2
PSO782G3402 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-12 77.4 255 22.7
PSO063G6155 Papaver somniferum HOM05D007919 ORTHO05D006738 3.0e-12 76.6 182 26.4
PSO223G0058 Papaver somniferum HOM05D000003 ORTHO05D000004 3.9e-12 76.3 157 32.5
PSO339G4202 Papaver somniferum HOM05D000003 ORTHO05D006738 3.9e-12 76.3 152 30.9
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 3.9e-12 76.3 130 33.8
PSO017G1601 Papaver somniferum HOM05D007919 ORTHO05D006738 5.1e-12 75.9 227 29.5
PSO478G2225 Papaver somniferum HOM05D007919 ORTHO05D006738 5.1e-12 75.9 199 28.1
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 6.7e-12 75.5 267 28.1
PSO782G2749 Papaver somniferum HOM05D008740 ORTHO05D006738 8.7e-12 75.1 203 29.1
PSO210G4402 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-11 74.3 200 30.5
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.5e-11 74.3 246 24.8
PSO384G0027 Papaver somniferum HOM05D007919 ORTHO05D006738 2.5e-11 73.6 186 30.6
PSO832G3082 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-11 73.2 134 32.8
PSO170G1593 Papaver somniferum HOM05D007919 ORTHO05D006738 7.4e-11 72.0 206 26.7
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 7.4e-11 72.0 218 25.7
AT2G34320 Arabidopsis thaliana HOM05D000003 ORTHO05D001091 9.6e-11 71.6 256 23.8
CANSAT56G0969 Cannabis sativa HOM05D000003 ORTHO05D000167 9.6e-11 71.6 247 26.3
PSO478G4994 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-10 71.2 150 34.7
PSO210G2509 Papaver somniferum HOM05D007919 ORTHO05D006738 2.1e-10 70.5 213 25.8
PSO761G0007 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-10 70.5 235 25.5
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.8e-10 69.3 230 27.4
PSO170G4716 Papaver somniferum HOM05D000003 ORTHO05D001026 4.8e-10 69.3 255 27.5
PSO724G1229 Papaver somniferum HOM05D007919 ORTHO05D006738 4.8e-10 69.3 169 29.0
PSO675G0069 Papaver somniferum HOM05D000003 ORTHO05D001026 6.3e-10 68.9 257 24.5
PSO478G3681 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-09 68.2 194 24.2
PSO478G1036 Papaver somniferum HOM05D003407 ORTHO05D001026 1.4e-09 67.8 230 26.5
Lj3g0003452 Lotus japonicus HOM05D000003 ORTHO05D000004 1.8e-09 67.4 217 25.3
PSO017G0119 Papaver somniferum HOM05D000003 ORTHO05D006738 1.8e-09 67.4 130 33.1
PSO063G1644 Papaver somniferum HOM05D003407 ORTHO05D001026 2.4e-09 67.0 218 27.5
PSO724G0347 Papaver somniferum HOM05D008740 ORTHO05D006738 2.4e-09 67.0 163 30.7
AUR62034608 Chenopodium quinoa HOM05D009702 ORTHO05D000004 3.1e-09 66.6 179 29.6
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 3.1e-09 66.6 185 29.7
PSO478G1611 Papaver somniferum HOM05D007919 ORTHO05D006738 4.1e-09 66.2 193 25.9
QL07p019929 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-09 66.2 263 25.9
TWI23G1168 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.1e-09 66.2 214 26.2
TAR346G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 4.1e-09 66.2 260 26.2
Lj5g0011892 Lotus japonicus HOM05D000003 ORTHO05D007254 6.9e-09 65.5 215 27.4
PSO339G2402 Papaver somniferum HOM05D007919 ORTHO05D006738 9.0e-09 65.1 148 30.4
Nn1g05893 Nelumbo nucifera HOM05D066907 ORTHO05D036848 1.5e-08 64.3 116 32.8
EL10Ac6g13992 Beta vulgaris HOM05D000003 ORTHO05D000004 2.0e-08 63.9 265 26.4
CANSAT01G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 2.0e-08 63.9 210 24.8
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-08 63.5 256 24.2
PSO832G2095 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-08 63.5 247 23.5
TAR351G0004 Trochodendron aralioides HOM05D000003 ORTHO05D009135 2.6e-08 63.5 180 33.3
FvH4_5g08844 Fragaria vesca HOM05D000003 ORTHO05D000004 3.4e-08 63.2 224 25.4
PSO478G1451 Papaver somniferum HOM05D007919 ORTHO05D006738 3.4e-08 63.2 150 29.3
TAR121G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.4e-08 63.2 271 25.8
PSO170G3207 Papaver somniferum HOM05D003407 ORTHO05D001026 7.6e-08 62.0 196 24.5
TWI23G0127 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 7.6e-08 62.0 208 27.9
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.0e-07 61.6 208 23.6
CANSAT11G2638 Cannabis sativa HOM05D000003 ORTHO05D009135 1.0e-07 61.6 253 22.1
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-07 61.6 250 27.2
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 61.2 249 25.7
Lj3g0020321 Lotus japonicus HOM05D000003 ORTHO05D000126 1.3e-07 61.2 204 26.5
PSO170G5004 Papaver somniferum HOM05D000003 ORTHO05D001026 1.3e-07 61.2 166 27.7
Gorai.003G055100 Gossypium raimondii HOM05D016941 ORTHO05D019244 1.7e-07 60.8 153 28.8
Rhsim01G0175900 Rhododendron simsii HOM05D001813 ORTHO05D026101 1.7e-07 60.8 184 26.1
TAR571G0001 Trochodendron aralioides HOM05D024081 ORTHO05D026209 1.7e-07 60.8 194 24.7
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 60.5 248 23.4
Aqoxy2G01964 Aquilegia oxysepala HOM05D000003 ORTHO05D006738 2.2e-07 60.5 143 25.9
Ah.12g061370 Amaranthus hybridus HOM05D000003 ORTHO05D000167 2.9e-07 60.1 248 25.4
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 2.9e-07 60.1 204 26.5
PSO063G0028 Papaver somniferum HOM05D007919 ORTHO05D006738 2.9e-07 60.1 138 34.1
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 3.8e-07 59.7 216 25.9
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 5.0e-07 59.3 253 23.7
Lj3g0008362 Lotus japonicus HOM05D000003 ORTHO05D000004 5.0e-07 59.3 262 27.1
PSO675G0004 Papaver somniferum HOM05D003407 ORTHO05D001026 5.0e-07 59.3 243 22.2
Gorai.004G068400 Gossypium raimondii HOM05D008183 ORTHO05D007254 6.5e-07 58.9 151 28.5
Aqoxy4G02038 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 8.4e-07 58.5 232 25.0
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-07 58.5 194 24.7
AUR62028046 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.4e-07 58.5 203 29.6
PSO170G1812 Papaver somniferum HOM05D007919 ORTHO05D006738 8.4e-07 58.5 185 24.3
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 58.2 256 25.0
PSO017G2202 Papaver somniferum HOM05D003407 ORTHO05D001026 1.1e-06 58.2 213 23.5
CANSAT54G0730 Cannabis sativa HOM05D000003 ORTHO05D009135 1.4e-06 57.8 252 22.6
Ah.12g061120 Amaranthus hybridus HOM05D000003 ORTHO05D000167 1.9e-06 57.4 192 27.6
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 1.9e-06 57.4 212 26.9
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 1.9e-06 57.4 132 31.1
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-06 57.0 185 28.6
CANSAT78G2409 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-06 56.6 207 25.6
PSO170G3605 Papaver somniferum HOM05D008740 ORTHO05D006738 3.2e-06 56.6 135 28.9
Aa31sc314G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.2e-06 56.2 202 24.8
Aa31sc466G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.2e-06 56.2 248 21.8
Aqoxy5G02089 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 4.2e-06 56.2 197 26.9
CANSAT25G2255 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-06 56.2 171 25.7
Prupe.8G032200 Prunus persica HOM05D000003 ORTHO05D000004 5.5e-06 55.8 240 24.2
TPR.G39142 Trifolium pratense HOM05D000003 ORTHO05D015712 5.5e-06 55.8 230 24.3
Aqoxy7G02093 Aquilegia oxysepala HOM05D008675 ORTHO05D000004 7.2e-06 55.5 90 30.0
AT3G09510 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 7.2e-06 55.5 211 25.6
CANSAT21G2025 Cannabis sativa HOM05D000003 ORTHO05D000167 7.2e-06 55.5 207 26.1
Rhsim02G0067500 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.2e-06 55.5 171 25.1
Aa31sc146G90 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.3e-06 55.1 260 23.5
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 9.3e-06 55.1 202 28.7
CANSAT64G0189 Cannabis sativa HOM05D000003 ORTHO05D000004 9.3e-06 55.1 252 23.0
AUR62030228 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.3e-06 55.1 190 24.7
TPR.G26335 Trifolium pratense HOM05D000007 ORTHO05D048973 9.3e-06 55.1 154 28.6


User provided reference genes

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