Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 3.9e-262 907.5 435 100.0
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 6.4e-180 634.4 341 91.2
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 5.6e-176 621.3 435 70.1
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 5.2e-174 614.8 377 75.3
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 5.2e-174 614.8 388 72.4
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 5.2e-174 614.8 403 70.5
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 6.8e-174 614.4 410 70.2
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 7.5e-173 610.9 417 68.8
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 1.0e-169 600.5 380 71.1
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 3.0e-169 599.0 433 66.5
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 6.6e-169 597.8 388 70.9
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 8.6e-169 597.4 407 67.6
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 1.1e-168 597.0 389 69.9
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 1.2e-167 593.6 388 70.4
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 6.2e-167 591.3 419 66.6
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 6.2e-167 591.3 370 71.4
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 1.8e-166 589.7 397 68.0
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 6.8e-166 587.8 385 69.9
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 8.9e-166 587.4 417 67.1
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 2.0e-165 586.3 379 70.4
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 2.6e-165 585.9 369 71.5
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 2.6e-165 585.9 398 68.8
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 4.4e-165 585.1 370 70.5
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 7.5e-165 584.3 374 70.1
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 1.3e-164 583.6 372 73.4
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 1.7e-164 583.2 382 69.1
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 3.2e-163 578.9 367 71.7
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 4.1e-163 578.6 390 68.5
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 2.1e-162 576.2 419 65.2
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 3.5e-162 575.5 377 70.6
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 4.6e-162 575.1 409 64.3
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 4.6e-162 575.1 370 71.1
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 7.8e-162 574.3 402 66.4
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 7.8e-162 574.3 408 66.2
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 2.3e-161 572.8 385 67.5
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 2.3e-161 572.8 369 71.0
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 3.9e-161 572.0 415 66.0
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 6.6e-161 571.2 472 59.5
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 6.6e-161 571.2 368 70.9
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 8.6e-161 570.9 371 71.7
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 2.5e-160 569.3 419 63.2
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 2.5e-160 569.3 388 67.5
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 7.3e-160 567.8 434 61.5
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 7.3e-160 567.8 396 65.4
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.6e-159 566.6 369 70.2
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 4.7e-159 565.1 437 60.2
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 6.2e-159 564.7 398 67.1
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 1.1e-158 563.9 368 70.7
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 1.8e-158 563.1 400 66.2
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 2.4e-158 562.8 384 67.4
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 2.4e-158 562.8 409 62.6
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 5.2e-158 561.6 368 69.8
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 6.8e-158 561.2 428 63.6
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 2.0e-157 559.7 368 70.1
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 3.4e-157 558.9 371 68.7
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 5.8e-157 558.1 432 63.9
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 7.6e-157 557.8 384 66.9
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 9.9e-157 557.4 377 66.6
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 1.3e-156 557.0 395 65.1
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 1.4e-155 553.5 410 63.7
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.6e-154 550.1 389 63.0
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 1.5e-152 543.5 390 62.8
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 2.8e-151 539.3 384 63.3
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 3.6e-151 538.9 369 66.4
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 1.8e-150 536.6 369 64.5
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 3.1e-150 535.8 421 60.6
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 2.6e-149 532.7 396 62.1
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 2.6e-149 532.7 396 62.1
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 4.4e-149 531.9 369 66.4
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 4.4e-149 531.9 401 61.3
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 5.8e-149 531.6 403 59.8
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 5.8e-149 531.6 369 65.6
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 1.3e-148 530.4 350 70.6
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 2.2e-148 529.6 369 65.9
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 2.2e-148 529.6 420 60.2
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.9e-148 529.3 370 65.4
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 2.9e-148 529.3 400 62.2
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 1.4e-147 526.9 368 63.3
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 9.3e-147 524.2 421 59.1
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 9.3e-147 524.2 370 65.7
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 1.2e-146 523.9 422 60.0
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 6.0e-146 521.5 371 63.3
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 7.8e-146 521.2 429 58.0
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 7.8e-146 521.2 367 66.8
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 1.0e-145 520.8 328 73.8
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 3.0e-145 519.2 369 64.2
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 3.0e-145 519.2 365 65.2
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 1.3e-143 513.8 368 64.4
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 4.0e-142 508.8 435 55.9
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 1.2e-138 497.3 438 56.8
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 8.7e-137 491.1 335 66.3
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 1.4e-134 483.8 403 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 2.7e-130 469.5 413 53.0
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 2.3e-129 466.5 328 64.9
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 1.5e-128 463.8 310 68.7
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 3.3e-128 462.6 293 70.3
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 1.6e-127 460.3 371 56.3
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 6.9e-126 454.9 308 66.2
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 7.9e-122 441.4 369 52.8
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 4.3e-120 435.6 369 52.0
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 3.1e-118 429.5 380 52.4
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 6.1e-106 388.7 369 48.2
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 5.9e-101 372.1 284 65.5
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 1.1e-99 367.9 263 66.5
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 7.0e-94 348.6 232 69.0
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 5.0e-92 342.4 371 46.1
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 4.9e-79 299.3 392 44.6
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 5.4e-78 295.8 343 47.2
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 7.8e-69 265.4 245 56.3
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 4.6e-61 239.6 189 58.7
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 3.0e-52 210.3 471 29.5
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 1.1e-51 208.4 195 52.8
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.4e-49 201.4 238 41.2
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 6.2e-42 176.0 129 59.7
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.4e-30 138.3 102 56.9
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 3.4e-24 117.1 208 34.1
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 6.0e-21 106.3 90 56.7
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 1.5e-19 101.7 62 71.0
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.9e-19 101.3 62 71.0
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.9e-19 101.3 65 70.8
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 3.1e-17 94.0 72 59.7
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 4.6e-13 80.1 45 73.3
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 8.7e-12 75.9 42 73.8
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 5.7e-11 73.2 54 59.3
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 7.4e-11 72.8 65 52.3
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 5.9e-08 63.2 71 47.9


User provided reference genes

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