Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6479 Papaver somniferum HOM05D010434 ORTHO05D012099 1.4e-242 842.4 410 100.0
PSO675G7191 Papaver somniferum HOM05D010434 ORTHO05D012099 8.0e-116 421.4 361 65.4
PSO675G1207 Papaver somniferum HOM05D010434 ORTHO05D012099 9.2e-96 354.8 293 63.8
PSO675G5043 Papaver somniferum HOM05D010434 ORTHO05D012099 3.3e-85 319.7 273 63.4
PSO541G3677 Papaver somniferum HOM05D010434 ORTHO05D012099 7.8e-79 298.5 266 62.8
PSO541G6407 Papaver somniferum HOM05D010434 ORTHO05D012099 2.3e-75 287.0 300 55.0
PSO675G4518 Papaver somniferum HOM05D010434 ORTHO05D012099 1.2e-74 284.6 287 56.4
PSO407G0222 Papaver somniferum HOM05D010434 ORTHO05D012099 9.3e-64 248.4 321 47.0
PSO675G5403 Papaver somniferum HOM05D010434 ORTHO05D012099 1.6e-60 237.7 224 58.9
PSO541G0642 Papaver somniferum HOM05D010434 ORTHO05D012099 1.1e-56 224.9 266 50.0
PSO675G8751 Papaver somniferum HOM05D010434 ORTHO05D012099 3.0e-54 216.9 261 53.6
PSO541G0487 Papaver somniferum HOM05D010434 ORTHO05D012099 6.2e-52 209.1 323 42.4
PSO675G7526 Papaver somniferum HOM05D010434 ORTHO05D012099 8.4e-49 198.7 251 47.8
PSO675G8523 Papaver somniferum HOM05D010434 ORTHO05D012099 6.5e-33 146.0 133 59.4
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 2.5e-29 134.0 301 36.2
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 2.2e-28 131.0 259 37.5
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 2.8e-20 104.0 169 40.2
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 3.1e-19 100.5 246 30.9
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 1.2e-18 98.6 257 30.7
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 4.5e-18 96.7 274 31.0
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 1.3e-17 95.1 247 28.7
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.3e-17 95.1 273 27.8
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 2.9e-17 94.0 341 24.6
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 6.5e-17 92.8 261 30.7
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.5e-17 92.8 262 27.9
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 6.5e-17 92.8 278 29.5
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 1.1e-16 92.0 257 29.6
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 1.1e-16 92.0 253 30.4
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.4e-16 91.7 259 30.1
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 1.4e-16 91.7 256 29.7
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.4e-16 91.7 263 29.3
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 1.4e-16 91.7 257 29.6
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.9e-16 91.3 257 30.0
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 1.9e-16 91.3 264 30.3
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 4.2e-16 90.1 259 29.7
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 5.5e-16 89.7 267 31.5
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 7.2e-16 89.4 262 27.9
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 9.4e-16 89.0 257 31.1
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.2e-15 88.6 262 27.9
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.2e-15 88.6 262 27.9
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.6e-15 88.2 264 29.5
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 2.7e-15 87.4 252 29.8
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 6.1e-15 86.3 270 28.5
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 7.9e-15 85.9 250 30.0
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.0e-14 85.5 165 32.1
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.0e-14 85.5 255 28.6
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 1.1e-13 82.0 262 30.5
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 2.0e-13 81.3 256 27.7
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 2.0e-13 81.3 252 28.6
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 2.0e-13 81.3 246 28.0
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.0e-13 81.3 241 27.4
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.2e-12 77.8 260 26.9
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.2e-12 77.8 263 27.8
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 2.8e-12 77.4 271 28.8
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 3.7e-12 77.0 272 28.7
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 3.7e-12 77.0 253 26.1
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 4.8e-12 76.6 286 28.7
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 6.3e-12 76.3 306 25.2
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.1e-11 75.5 263 28.5
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 1.4e-11 75.1 263 28.5
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.8e-11 74.7 273 25.6
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.4e-11 74.3 165 30.9
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 2.4e-11 74.3 162 30.2
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 2.4e-11 74.3 250 26.0
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 4.1e-11 73.6 258 24.8
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 5.3e-11 73.2 204 29.9
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 7.0e-11 72.8 273 28.9
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 7.0e-11 72.8 263 25.5
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 7.0e-11 72.8 163 30.7
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 9.1e-11 72.4 248 25.4
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 1.2e-10 72.0 257 27.2
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 2.0e-10 71.2 271 26.6
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 2.0e-10 71.2 271 28.0
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 2.0e-10 71.2 272 27.6
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 3.5e-10 70.5 273 28.2
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 3.5e-10 70.5 271 25.1
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 3.5e-10 70.5 136 32.4
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 5.9e-10 69.7 165 30.3
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 5.9e-10 69.7 154 31.8
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 7.7e-10 69.3 296 26.4
PSO541G3427 Papaver somniferum HOM05D010434 ORTHO05D012099 1.0e-09 68.9 52 71.2
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 1.0e-09 68.9 169 30.2
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.3e-09 68.6 255 28.2
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.7e-09 68.2 157 30.6
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 1.7e-09 68.2 281 28.5
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 8.5e-09 65.9 262 22.5
SEGI_08864 Sequoiadendron giganteum HOM05D002270 ORTHO05D012099 8.5e-09 65.9 165 31.5
SEGI_33198 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 8.5e-09 65.9 165 31.5
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 1.5e-08 65.1 186 28.0
SEGI_39597 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.5e-08 64.3 165 30.9
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.5e-08 64.3 248 27.8
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 3.2e-08 63.9 161 31.1
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 4.2e-08 63.5 170 33.5
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 9.4e-08 62.4 163 30.7
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 2.7e-07 60.8 170 32.9
Nn5g26982 Nelumbo nucifera HOM05D002270 ORTHO05D012099 2.7e-07 60.8 65 49.2
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 2.7e-07 60.8 162 32.7
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 3.6e-07 60.5 170 32.9
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 4.7e-07 60.1 170 32.9
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 4.7e-07 60.1 164 31.1
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 6.1e-07 59.7 274 24.8
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 1.0e-06 58.9 161 26.7
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.4e-06 58.5 176 31.2
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.4e-06 58.5 170 30.6
VMungo0464G0658 Vigna mungo HOM05D002270 ORTHO05D002866 1.8e-06 58.2 164 26.2
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 2.3e-06 57.8 336 20.5
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 5.2e-06 56.6 176 30.1


User provided reference genes

Program Settings