Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6449 Papaver somniferum HOM05D003431 ORTHO05D303587 3.5e-112 408.3 203 100.0
PSO447G0223 Papaver somniferum HOM05D003431 ORTHO05D303557 2.7e-40 169.5 159 62.3
PSO173G0151 Papaver somniferum HOM05D003431 ORTHO05D304616 1.2e-32 144.1 185 46.5
PSO170G0877 Papaver somniferum HOM05D003431 ORTHO05D304563 9.6e-30 134.4 128 54.7
PSO063G0979 Papaver somniferum HOM05D003431 ORTHO05D305187 1.4e-25 120.6 153 48.4
PSO478G5253 Papaver somniferum HOM05D003431 ORTHO05D302051 2.5e-14 83.2 101 50.5
Migut.B00667 Erythranthe guttata HOM05D003431 ORTHO05D005152 9.7e-14 81.3 130 39.2
Potri.011G156300 Populus trichocarpa HOM05D003431 ORTHO05D005152 1.3e-13 80.9 130 40.0
Sabra11G0143500 Salix brachista HOM05D003431 ORTHO05D005152 2.2e-13 80.1 130 40.0
DCAR_013995 Daucus carota HOM05D003431 ORTHO05D005152 3.7e-13 79.3 130 40.8
vmacro01777 Vaccinium macrocarpon HOM05D003431 ORTHO05D005152 3.7e-13 79.3 130 41.5
HanXRQChr01g0021831 Helianthus annuus HOM05D003431 ORTHO05D005152 4.8e-13 79.0 130 37.7
Manes.07G013300 Manihot esculenta HOM05D003431 ORTHO05D005152 6.3e-13 78.6 130 40.0
Sabra16G0311800 Salix brachista HOM05D003431 ORTHO05D005152 6.3e-13 78.6 130 40.0
Atru.chr6.1030 Acer truncatum HOM05D003431 ORTHO05D005152 1.1e-12 77.8 130 40.0
Hma1.2p1_0557F.1_g178330 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 1.1e-12 77.8 130 39.2
Hma1.2p1_0557F.1_g178340 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 1.1e-12 77.8 130 39.2
Hma1.2p1_2850F.1_g329406 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 1.1e-12 77.8 130 39.2
Atru.chr6.1079 Acer truncatum HOM05D003431 ORTHO05D005152 1.4e-12 77.4 130 39.2
ATR0174G027 Amborella trichopoda HOM05D003431 ORTHO05D005152 1.8e-12 77.0 130 39.2
HanXRQChr03g0066511 Helianthus annuus HOM05D003431 ORTHO05D005152 2.4e-12 76.6 133 37.6
Actinidia39056 Actinidia chinensis HOM05D003431 ORTHO05D005152 3.1e-12 76.3 130 40.8
MSTRG.16533 Avicennia marina HOM05D003431 ORTHO05D005152 3.1e-12 76.3 130 38.5
TAR636G0765 Trochodendron aralioides HOM05D003431 ORTHO05D005152 3.1e-12 76.3 130 39.2
Lsat_1_v5_gn_7_77981 Lactuca sativa HOM05D003431 ORTHO05D005152 4.1e-12 75.9 130 36.9
Solyc01g104470.3 Solanum lycopersicum HOM05D003431 ORTHO05D005152 4.1e-12 75.9 130 37.7
Sopen01g046970 Solanum pennellii HOM05D003431 ORTHO05D005152 4.1e-12 75.9 130 37.7
PGSC0003DMG400023745 Solanum tuberosum HOM05D003431 ORTHO05D005152 4.1e-12 75.9 130 37.7
Carub.0001s2531 Capsella rubella HOM05D003431 ORTHO05D005152 5.3e-12 75.5 130 39.2
Cpa.g.sc2.27 Carica papaya HOM05D003431 ORTHO05D005152 5.3e-12 75.5 130 37.7
TWI14G0641 Tripterygium wilfordii HOM05D003431 ORTHO05D005152 5.3e-12 75.5 130 39.2
VMungo0540G2199 Vigna mungo HOM05D003431 ORTHO05D005152 5.3e-12 75.5 131 38.9
Dinv24261 Davidia involucrata HOM05D003431 ORTHO05D005152 6.9e-12 75.1 130 38.5
Mapoly0015s0017 Marchantia polymorpha HOM05D003431 ORTHO05D005152 6.9e-12 75.1 130 36.2
Phvul.006G212200 Phaseolus vulgaris HOM05D003431 ORTHO05D005152 6.9e-12 75.1 130 38.5
arahy.Tifrunner.gnm1.ann1.I5HCXG Arachis hypogaea HOM05D003431 ORTHO05D005152 9.1e-12 74.7 130 38.5
Manes.10G132200 Manihot esculenta HOM05D003431 ORTHO05D005152 9.1e-12 74.7 130 38.5
Glyma.08G184300 Glycine max HOM05D003431 ORTHO05D005152 1.2e-11 74.3 130 38.5
PSO210G4636 Papaver somniferum HOM05D003431 ORTHO05D305602 1.2e-11 74.3 65 64.6
SGA_v2.0_scaffold1G00326 Striga asiatica HOM05D003431 ORTHO05D005152 1.2e-11 74.3 130 36.9
GSVIVG01023018001 Vitis vinifera HOM05D003431 ORTHO05D005152 1.2e-11 74.3 130 39.2
CSS0006665 Camellia sinensis var. sinensis HOM05D003431 ORTHO05D005152 1.5e-11 73.9 130 38.5
Eucgr.I02710 Eucalyptus grandis HOM05D003431 ORTHO05D005152 1.5e-11 73.9 130 38.5
Nitab4.5_0010140g0020 Nicotiana tabacum HOM05D003431 ORTHO05D005152 2.0e-11 73.6 130 37.7
PSO017G6291 Papaver somniferum HOM05D003431 ORTHO05D005152 2.0e-11 73.6 130 34.6
PSO170G4153 Papaver somniferum HOM05D003431 ORTHO05D005152 2.0e-11 73.6 130 34.6
Rhsim11G0131700 Rhododendron simsii HOM05D003431 ORTHO05D005152 2.0e-11 73.6 130 39.2
SalBow6G0908 Salvia bowleyana HOM05D003431 ORTHO05D005152 2.0e-11 73.6 130 37.7
TWI23G0077 Tripterygium wilfordii HOM05D003431 ORTHO05D005152 2.0e-11 73.6 130 37.7
Glyma.15G048200 Glycine max HOM05D003431 ORTHO05D005152 2.6e-11 73.2 130 38.5
MD08G1225200 Malus domestica HOM05D003431 ORTHO05D005152 2.6e-11 73.2 133 36.8
Peaxi162Scf00011g00014 Petunia axillaris HOM05D003431 ORTHO05D005152 2.6e-11 73.2 130 39.2
Zm00001eb163260 Zea mays HOM05D003431 ORTHO05D005152 3.4e-11 72.8 130 38.5
Aqoxy4G02442 Aquilegia oxysepala HOM05D003431 ORTHO05D005152 4.5e-11 72.4 130 36.2
AT1G25260 Arabidopsis thaliana HOM05D003431 ORTHO05D005152 4.5e-11 72.4 130 36.9
TAR633G0411 Trochodendron aralioides HOM05D003431 ORTHO05D005152 4.5e-11 72.4 130 37.7
unitig_22.g6119 Utricularia gibba HOM05D003431 ORTHO05D005152 4.5e-11 72.4 130 36.2
BcaC01g01674 Brassica carinata HOM05D003431 ORTHO05D005152 7.7e-11 71.6 130 37.7
BolC3t19610H Brassica oleracea HOM05D003431 ORTHO05D005152 7.7e-11 71.6 130 37.7
BraA08t34627Z Brassica rapa HOM05D003431 ORTHO05D005152 7.7e-11 71.6 130 37.7
CANSAT11G1865 Cannabis sativa HOM05D003431 ORTHO05D005152 7.7e-11 71.6 130 36.9
A08p26810 Brassica napus HOM05D003431 ORTHO05D005152 1.0e-10 71.2 130 37.7
Ciclev10002376m.g Citrus clementina HOM05D003431 ORTHO05D005152 1.0e-10 71.2 130 37.7
Oeu000195.1 Olea europaea HOM05D003431 ORTHO05D005152 1.3e-10 70.9 130 37.7
RcHm_v2.0_Chr7g0224251 Rosa chinensis HOM05D003431 ORTHO05D005152 1.3e-10 70.9 133 34.6
A09p39090 Brassica napus HOM05D003431 ORTHO05D005152 1.7e-10 70.5 130 36.9
C03p73140 Brassica napus HOM05D003431 ORTHO05D005152 1.7e-10 70.5 130 36.9
C05p25340 Brassica napus HOM05D003431 ORTHO05D005152 1.7e-10 70.5 130 36.9
BraA09t39409Z Brassica rapa HOM05D003431 ORTHO05D005152 1.7e-10 70.5 130 36.9
QL02p098641 Quercus lobata HOM05D003431 ORTHO05D005152 1.7e-10 70.5 130 36.2
Thhalv10008680m.g Eutrema salsugineum HOM05D003431 ORTHO05D005152 2.2e-10 70.1 130 36.9
THA.LOC104807949 Tarenaya hassleriana HOM05D003431 ORTHO05D005152 2.2e-10 70.1 130 37.7
BcaC06g35235 Brassica carinata HOM05D003431 ORTHO05D005152 2.9e-10 69.7 130 36.9
C07p18390 Brassica napus HOM05D003431 ORTHO05D005152 2.9e-10 69.7 130 36.9
Duzib248G1379 Durio zibethinus HOM05D003431 ORTHO05D005152 2.9e-10 69.7 130 37.7
Sp1g23030 Schrenkiella parvula HOM05D003431 ORTHO05D005152 2.9e-10 69.7 130 36.2
AL1G40100 Arabidopsis lyrata HOM05D003431 ORTHO05D005152 3.8e-10 69.3 130 36.2
BolC5t31269H Brassica oleracea HOM05D003431 ORTHO05D005152 3.8e-10 69.3 130 36.2
PSO339G0293 Papaver somniferum HOM05D003431 ORTHO05D005152 3.8e-10 69.3 130 35.4
PSO801G0645 Papaver somniferum HOM05D003431 ORTHO05D005152 3.8e-10 69.3 130 35.4
BcaB03g12039 Brassica carinata HOM05D003431 ORTHO05D005152 5.0e-10 68.9 130 36.9
BcaC05g26690 Brassica carinata HOM05D003431 ORTHO05D005152 5.0e-10 68.9 130 36.9
FAN08G2387 Fragaria x ananassa HOM05D003431 ORTHO05D005152 5.0e-10 68.9 133 33.8
FAN13G1098 Fragaria x ananassa HOM05D003431 ORTHO05D005152 5.0e-10 68.9 133 33.8
MD15G1418800 Malus domestica HOM05D003431 ORTHO05D005152 5.0e-10 68.9 133 34.6
Sed0002836 Sechium edule HOM05D003431 ORTHO05D005152 5.0e-10 68.9 130 36.2
Sed0006026 Sechium edule HOM05D003431 ORTHO05D005152 5.0e-10 68.9 130 36.2
BcaC05g26486 Brassica carinata HOM05D003431 ORTHO05D005152 6.5e-10 68.6 130 36.9
A07p12440 Brassica napus HOM05D003431 ORTHO05D005152 6.5e-10 68.6 130 36.9
BraA07t29025Z Brassica rapa HOM05D003431 ORTHO05D005152 6.5e-10 68.6 130 36.9
CiPaw.06G149000 Carya illinoinensis HOM05D003431 ORTHO05D005152 6.5e-10 68.6 130 35.4
ClCG02G000650 Citrullus lanatus HOM05D003431 ORTHO05D005152 6.5e-10 68.6 170 30.6
Lsat_1_v5_gn_9_116360 Lactuca sativa HOM05D003431 ORTHO05D005152 6.5e-10 68.6 123 38.2
Lalb_Chr18g0060821 Lupinus albus HOM05D003431 ORTHO05D005152 8.5e-10 68.2 130 37.7
AagrBONN_evm.TU.Sc2ySwM_369.396 Anthoceros agrestis HOM05D003431 ORTHO05D005152 1.1e-09 67.8 131 35.9
CDE12G0598 Ceratophyllum demersum HOM05D003431 ORTHO05D005152 1.1e-09 67.8 130 36.2
CsaV3_2G018120 Cucumis sativus L. HOM05D003431 ORTHO05D005152 1.1e-09 67.8 167 30.5
Hund24426 Selenicereus undatus HOM05D003431 ORTHO05D005152 1.1e-09 67.8 130 36.9
Aa31LG7G9280 Aethionema arabicum HOM05D003431 ORTHO05D005152 1.4e-09 67.4 120 39.2
PGR142G4046 Punica granatum HOM05D003431 ORTHO05D005152 1.4e-09 67.4 125 36.0
Thecc.02G041300 Theobroma cacao HOM05D003431 ORTHO05D005152 1.4e-09 67.4 130 36.2
BcaB03g14023 Brassica carinata HOM05D003431 ORTHO05D005152 1.9e-09 67.0 120 37.5
Gohir.A01G176900 Gossypium hirsutum HOM05D003431 ORTHO05D005152 1.9e-09 67.0 130 36.9
Gohir.D01G167700 Gossypium hirsutum HOM05D003431 ORTHO05D005152 1.9e-09 67.0 130 36.9
Gorai.002G208400 Gossypium raimondii HOM05D003431 ORTHO05D005152 1.9e-09 67.0 130 36.9
Psat1g220040 Pisum sativum HOM05D003431 ORTHO05D005152 1.9e-09 67.0 130 35.4
Duzib132G0664 Durio zibethinus HOM05D003431 ORTHO05D005152 2.5e-09 66.6 126 37.3
MBI15_g28822_MAGBIO Magnolia biondii HOM05D003431 ORTHO05D005152 2.5e-09 66.6 130 36.2
Medtr2g007780 Medicago truncatula HOM05D003431 ORTHO05D005152 2.5e-09 66.6 129 35.7
Sc11g0006640 Simmondsia chinensis HOM05D003431 ORTHO05D005152 2.5e-09 66.6 130 37.7
Lj9A308T36 Lonicera japonica HOM05D003431 ORTHO05D005152 3.2e-09 66.2 130 33.8
Prupe.1G562900 Prunus persica HOM05D003431 ORTHO05D005152 3.2e-09 66.2 130 36.2
Cc02_g22270 Coffea canephora HOM05D003431 ORTHO05D005152 4.2e-09 65.9 130 36.2
Ca_00090_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 5.5e-09 65.5 129 34.9
Ca_29929_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 5.5e-09 65.5 129 34.9
TPR.G39937 Trifolium pratense HOM05D003431 ORTHO05D005152 5.5e-09 65.5 130 34.6
CARHR026300 Cardamine hirsuta HOM05D003431 ORTHO05D005152 7.2e-09 65.1 130 36.2
Lj6g0011327 Lotus japonicus HOM05D003431 ORTHO05D005152 7.2e-09 65.1 130 35.4
ECA236G3864 Erigeron canadensis HOM05D003431 ORTHO05D005152 9.4e-09 64.7 130 33.8
arahy.Tifrunner.gnm1.ann1.N8P1ZJ Arachis hypogaea HOM05D003431 ORTHO05D005152 1.6e-08 63.9 111 37.8
FAN04G1904 Fragaria x ananassa HOM05D003431 ORTHO05D005152 1.6e-08 63.9 135 32.6
BolC7t42349H Brassica oleracea HOM05D003431 ORTHO05D005152 4.7e-08 62.4 120 37.5
SMO367G0584 Selaginella moellendorffii HOM05D003431 ORTHO05D005152 7.9e-08 61.6 130 33.8
FvH4_5g30060 Fragaria vesca HOM05D003431 ORTHO05D005152 1.0e-07 61.2 114 33.3
FAN18G1423 Fragaria x ananassa HOM05D003431 ORTHO05D005152 1.0e-07 61.2 134 32.1
Cfa023894 Carpinus fangiana HOM05D003431 ORTHO05D005152 1.8e-07 60.5 190 27.9
AUR62020868 Chenopodium quinoa HOM05D003431 ORTHO05D005152 6.7e-07 58.5 128 32.8
AUR62018551 Chenopodium quinoa HOM05D003431 ORTHO05D005152 1.5e-06 57.4 128 32.8
EL10Ac3g07449 Beta vulgaris HOM05D003431 ORTHO05D005152 2.6e-06 56.6 128 32.8
CDE06G1320 Ceratophyllum demersum HOM05D003431 ORTHO05D005152 4.4e-06 55.8 112 34.8
CAN.G1352.24 Capsicum annuum HOM05D003431 ORTHO05D005152 5.7e-06 55.5 101 36.6


User provided reference genes

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