Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6373 Papaver somniferum HOM05D003655 ORTHO05D004065 3.5e-297 1024.2 528 100.0
Aqoxy3G01151 Aquilegia oxysepala HOM05D003655 ORTHO05D004065 4.7e-60 236.5 558 31.9
TAR629G1826 Trochodendron aralioides HOM05D003655 ORTHO05D004065 1.8e-59 234.6 574 32.1
MBI10_g00730_MAGBIO Magnolia biondii HOM05D003655 ORTHO05D004065 5.2e-59 233.0 681 30.2
TAR622G0533 Trochodendron aralioides HOM05D003655 ORTHO05D004065 3.7e-57 226.9 642 29.4
Nn4g22660 Nelumbo nucifera HOM05D003655 ORTHO05D004065 2.7e-55 220.7 623 30.5
Dinv33450 Davidia involucrata HOM05D003655 ORTHO05D004065 1.2e-52 211.8 546 31.1
Dinv35101 Davidia involucrata HOM05D003655 ORTHO05D004065 6.1e-52 209.5 529 32.1
Potri.017G072100 Populus trichocarpa HOM05D003655 ORTHO05D004065 1.8e-51 208.0 636 28.3
PSO832G3537 Papaver somniferum HOM05D003655 ORTHO05D004065 4.0e-51 206.8 687 28.2
CSS0048500 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 2.6e-50 204.1 499 32.5
Actinidia36106 Actinidia chinensis HOM05D003655 ORTHO05D004065 9.8e-50 202.2 500 31.8
Manes.15G166100 Manihot esculenta HOM05D003655 ORTHO05D004065 6.3e-49 199.5 587 30.3
Nitab4.5_0000419g0080 Nicotiana tabacum HOM05D003655 ORTHO05D004065 2.0e-47 194.5 461 32.3
CSS0046674 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 4.5e-47 193.4 495 31.1
CSS0034547 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 5.9e-47 193.0 495 30.7
Sabra17G0060300 Salix brachista HOM05D003655 ORTHO05D004065 1.0e-46 192.2 476 31.1
Manes.17G115600 Manihot esculenta HOM05D003655 ORTHO05D004065 1.3e-46 191.8 560 29.6
MD09G1028400 Malus domestica HOM05D003655 ORTHO05D004065 1.7e-46 191.4 529 30.2
Sabra16G0231200 Salix brachista HOM05D003655 ORTHO05D004065 1.7e-46 191.4 448 31.7
Gorai.001G264400 Gossypium raimondii HOM05D003655 ORTHO05D004065 2.9e-46 190.7 427 31.9
Lsat_1_v5_gn_2_91520 Lactuca sativa HOM05D003655 ORTHO05D004065 3.9e-46 190.3 512 30.1
Thecc.04G015700 Theobroma cacao HOM05D003655 ORTHO05D004065 3.9e-46 190.3 423 33.6
Haze_14727 Corylus avellana HOM05D003655 ORTHO05D004065 5.0e-46 189.9 413 32.4
MD17G1029900 Malus domestica HOM05D003655 ORTHO05D004065 6.6e-46 189.5 530 30.8
PSO063G4513 Papaver somniferum HOM05D003655 ORTHO05D004065 6.6e-46 189.5 687 26.6
Sopen12g014870 Solanum pennellii HOM05D003655 ORTHO05D004065 6.6e-46 189.5 483 31.3
Gohir.D07G229300 Gossypium hirsutum HOM05D003655 ORTHO05D004065 8.6e-46 189.1 427 31.9
Psat1g054960 Pisum sativum HOM05D003655 ORTHO05D004065 8.6e-46 189.1 607 29.5
CiPaw.03G042300 Carya illinoinensis HOM05D003655 ORTHO05D004065 1.1e-45 188.7 491 31.8
Sopen02g031240 Solanum pennellii HOM05D003655 ORTHO05D004065 1.1e-45 188.7 468 32.1
Gohir.A07G222600 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.5e-45 188.3 426 31.0
Potri.001G351532 Populus trichocarpa HOM05D003655 ORTHO05D004065 3.3e-45 187.2 482 30.3
CDE06G2242 Ceratophyllum demersum HOM05D003655 ORTHO05D004065 7.3e-45 186.0 441 31.1
Solyc12g035250.3 Solanum lycopersicum HOM05D003655 ORTHO05D004065 7.3e-45 186.0 483 31.1
QL02p075116 Quercus lobata HOM05D003655 ORTHO05D004065 9.5e-45 185.7 548 29.4
PGSC0003DMG400004231 Solanum tuberosum HOM05D003655 ORTHO05D004065 9.5e-45 185.7 565 28.7
Nitab4.5_0006802g0070 Nicotiana tabacum HOM05D003655 ORTHO05D004065 2.8e-44 184.1 332 34.9
HanXRQChr07g0198951 Helianthus annuus HOM05D003655 ORTHO05D004065 3.6e-44 183.7 519 30.8
Cpa.g.sc108.55 Carica papaya HOM05D003655 ORTHO05D004065 4.7e-44 183.3 420 33.3
Duzib187G1135 Durio zibethinus HOM05D003655 ORTHO05D004065 4.7e-44 183.3 383 33.2
Medtr6g004970 Medicago truncatula HOM05D003655 ORTHO05D004065 4.7e-44 183.3 671 27.9
TWI56G0063 Tripterygium wilfordii HOM05D003655 ORTHO05D004065 1.4e-43 181.8 585 28.0
MELO3C009984.2 Cucumis melo HOM05D003655 ORTHO05D004065 1.8e-43 181.4 580 27.9
Solyc02g086510.4 Solanum lycopersicum HOM05D003655 ORTHO05D004065 1.8e-43 181.4 439 32.1
Sed0000390 Sechium edule HOM05D003655 ORTHO05D004065 2.3e-43 181.0 679 26.5
Nitab4.5_0002385g0010 Nicotiana tabacum HOM05D003655 ORTHO05D004065 4.0e-43 180.3 493 30.0
ClCG10G013970 Citrullus lanatus HOM05D003655 ORTHO05D004065 5.2e-43 179.9 539 29.3
HanXRQChr14g0450511 Helianthus annuus HOM05D003655 ORTHO05D004065 5.2e-43 179.9 438 32.2
CANSAT64G1680 Cannabis sativa HOM05D003655 ORTHO05D004065 6.8e-43 179.5 369 35.5
PGR142G1836 Punica granatum HOM05D003655 ORTHO05D004065 8.9e-43 179.1 490 30.4
PGSC0003DMG400012599 Solanum tuberosum HOM05D003655 ORTHO05D004065 8.9e-43 179.1 468 31.0
Glyma.19G004000 Glycine max HOM05D003655 ORTHO05D004065 4.4e-42 176.8 530 29.4
Gohir.A09G028600 Gossypium hirsutum HOM05D003655 ORTHO05D004065 5.8e-42 176.4 354 34.5
Peaxi162Scf00129g01426 Petunia axillaris HOM05D003655 ORTHO05D004065 7.5e-42 176.0 580 28.4
CsaV3_3G042720 Cucumis sativus L. HOM05D003655 ORTHO05D004065 9.8e-42 175.6 633 27.3
ECA238G4588 Erigeron canadensis HOM05D003655 ORTHO05D004065 9.8e-42 175.6 475 30.7
Sed0015855 Sechium edule HOM05D003655 ORTHO05D004065 1.3e-41 175.3 606 26.7
Lsat_1_v5_gn_4_183501 Lactuca sativa HOM05D003655 ORTHO05D004065 1.7e-41 174.9 267 37.5
Ca_04156_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 2.2e-41 174.5 595 27.1
AUR62009456 Chenopodium quinoa HOM05D003655 ORTHO05D004065 2.9e-41 174.1 343 33.8
Gohir.D09G028200 Gossypium hirsutum HOM05D003655 ORTHO05D004065 2.9e-41 174.1 498 29.5
Gorai.012G063700 Gossypium raimondii HOM05D003655 ORTHO05D004065 3.7e-41 173.7 549 28.4
Rhsim08G0051400 Rhododendron simsii HOM05D003655 ORTHO05D004065 6.4e-41 172.9 343 32.4
vmacro18276 Vaccinium macrocarpon HOM05D003655 ORTHO05D004065 6.4e-41 172.9 343 33.2
Cc07_g01820 Coffea canephora HOM05D003655 ORTHO05D004065 8.3e-41 172.6 538 27.5
Gohir.D04G057000 Gossypium hirsutum HOM05D003655 ORTHO05D004065 8.3e-41 172.6 549 28.4
VMungo0464G0503 Vigna mungo HOM05D003655 ORTHO05D004065 8.3e-41 172.6 490 29.4
Glyma.05G004100 Glycine max HOM05D003655 ORTHO05D004065 1.1e-40 172.2 524 29.0
AUR62023138 Chenopodium quinoa HOM05D003655 ORTHO05D004065 1.9e-40 171.4 343 33.2
Gohir.A05G356200 Gossypium hirsutum HOM05D003655 ORTHO05D004065 2.4e-40 171.0 492 29.7
Lj4C88T15 Lonicera japonica HOM05D003655 ORTHO05D004065 2.4e-40 171.0 541 27.4
Os04g0394300 Oryza sativa ssp. japonica HOM05D003655 ORTHO05D004065 2.4e-40 171.0 509 29.3
Gorai.006G032800 Gossypium raimondii HOM05D003655 ORTHO05D004065 3.2e-40 170.6 500 29.4
COL.COLO4_29094 Corchorus olitorius HOM05D003655 ORTHO05D004065 4.1e-40 170.2 554 28.5
DCAR_011248 Daucus carota HOM05D003655 ORTHO05D004065 4.1e-40 170.2 509 27.3
Phvul.004G007600 Phaseolus vulgaris HOM05D003655 ORTHO05D004065 5.4e-40 169.9 490 29.6
RcHm_v2.0_Chr2g0173051 Rosa chinensis HOM05D003655 ORTHO05D004065 5.4e-40 169.9 608 27.1
FAN09G1146 Fragaria x ananassa HOM05D003655 ORTHO05D004065 7.0e-40 169.5 515 30.3
Lj2g0025004 Lotus japonicus HOM05D003655 ORTHO05D004065 9.2e-40 169.1 534 28.8
Zm00001eb085110 Zea mays HOM05D003655 ORTHO05D004065 9.2e-40 169.1 549 28.6
ATR0568G013 Amborella trichopoda HOM05D003655 ORTHO05D004065 1.6e-39 168.3 676 26.9
MSTRG.24033 Avicennia marina HOM05D003655 ORTHO05D004065 2.7e-39 167.5 441 30.8
EL10Ac2g04412 Beta vulgaris HOM05D003655 ORTHO05D004065 3.5e-39 167.2 462 29.2
FAN05G1583 Fragaria x ananassa HOM05D003655 ORTHO05D004065 3.5e-39 167.2 498 30.1
Sc03g0007560 Simmondsia chinensis HOM05D003655 ORTHO05D004065 4.6e-39 166.8 522 27.2
Duzib264G1220 Durio zibethinus HOM05D003655 ORTHO05D004065 7.8e-39 166.0 423 32.2
Migut.H00084 Erythranthe guttata HOM05D003655 ORTHO05D004065 7.8e-39 166.0 586 28.7
Eucgr.I01752 Eucalyptus grandis HOM05D003655 ORTHO05D004065 7.8e-39 166.0 398 30.4
FAN05G2840 Fragaria x ananassa HOM05D003655 ORTHO05D004065 7.8e-39 166.0 499 30.3
arahy.Tifrunner.gnm1.ann1.MY3LMM Arachis hypogaea HOM05D003655 ORTHO05D004065 1.7e-38 164.9 421 28.7
Ciclev10014173m.g Citrus clementina HOM05D003655 ORTHO05D004065 1.7e-38 164.9 340 32.6
FAN02G0206 Fragaria x ananassa HOM05D003655 ORTHO05D004065 1.7e-38 164.9 498 29.9
MSTRG.3149 Avicennia marina HOM05D003655 ORTHO05D004065 2.3e-38 164.5 473 29.2
PGR083G1229 Punica granatum HOM05D003655 ORTHO05D004065 2.3e-38 164.5 316 35.1
Lj4A88G37 Lonicera japonica HOM05D003655 ORTHO05D004065 3.0e-38 164.1 324 33.0
FvH4_6g51350 Fragaria vesca HOM05D003655 ORTHO05D004065 3.9e-38 163.7 477 30.4
FAN14G5704 Fragaria x ananassa HOM05D003655 ORTHO05D004065 3.9e-38 163.7 477 30.4
Peaxi162Scf00700g00429 Petunia axillaris HOM05D003655 ORTHO05D004065 5.0e-38 163.3 483 29.6
Aa31LG2G4980 Aethionema arabicum HOM05D003655 ORTHO05D004065 6.6e-38 162.9 393 30.8
SalBow6G0256 Salvia bowleyana HOM05D003655 ORTHO05D004065 1.5e-37 161.8 535 28.0
unitig_0.g1601 Utricularia gibba HOM05D003655 ORTHO05D004065 1.5e-37 161.8 498 29.5
Prupe.3G290100 Prunus persica HOM05D003655 ORTHO05D004065 1.9e-37 161.4 525 28.8
Aa31LG2G4970 Aethionema arabicum HOM05D003655 ORTHO05D004065 2.5e-37 161.0 299 35.8
Lalb_Chr06g0175811 Lupinus albus HOM05D003655 ORTHO05D004065 2.5e-37 161.0 523 29.4
TPR.G14089 Trifolium pratense HOM05D003655 ORTHO05D004065 3.3e-37 160.6 464 30.2
Hma1.2p1_1291F.1_g273550 Hydrangea macrophylla HOM05D003655 ORTHO05D004065 9.5e-37 159.1 440 30.2
HPP92_000306 Vanilla planifolia HOM05D003655 ORTHO05D004065 9.5e-37 159.1 458 31.2
Hund16251 Selenicereus undatus HOM05D003655 ORTHO05D004065 1.6e-36 158.3 334 31.1
Ah.16g100890 Amaranthus hybridus HOM05D003655 ORTHO05D004065 2.8e-36 157.5 377 31.3
Gorai.007G075900 Gossypium raimondii HOM05D003655 ORTHO05D004065 2.8e-36 157.5 429 30.3
Actinidia35766 Actinidia chinensis HOM05D003655 ORTHO05D004065 3.6e-36 157.1 504 28.4
Ah.10g038310 Amaranthus hybridus HOM05D003655 ORTHO05D004065 3.6e-36 157.1 466 28.8
SEGI_17646 Sequoiadendron giganteum HOM05D003655 ORTHO05D004065 4.7e-36 156.8 541 27.5
Gohir.D11G070750 Gossypium hirsutum HOM05D003655 ORTHO05D004065 2.3e-35 154.5 429 30.1
Actinidia39401 Actinidia chinensis HOM05D003655 ORTHO05D004065 3.1e-35 154.1 449 30.7
HanXRQChr09g0255101 Helianthus annuus HOM05D003655 ORTHO05D004065 3.1e-35 154.1 442 28.5
THA.LOC104823948 Tarenaya hassleriana HOM05D003655 ORTHO05D004065 4.0e-35 153.7 376 29.8
BcaC03g17479 Brassica carinata HOM05D003655 ORTHO05D004065 5.2e-35 153.3 411 28.7
C02p54430 Brassica napus HOM05D003655 ORTHO05D004065 5.2e-35 153.3 411 28.7
Thhalv10003632m.g Eutrema salsugineum HOM05D003655 ORTHO05D004065 5.2e-35 153.3 310 31.6
Carub.0005s0625 Capsella rubella HOM05D003655 ORTHO05D004065 6.8e-35 152.9 473 27.1
SGA_v2.0_scaffold481G52311 Striga asiatica HOM05D003655 ORTHO05D004065 6.8e-35 152.9 461 29.5
A06p40940 Brassica napus HOM05D003655 ORTHO05D004065 8.9e-35 152.5 312 32.1
BolC2t11504H Brassica oleracea HOM05D003655 ORTHO05D004065 1.2e-34 152.1 411 29.0
BraA06t27015Z Brassica rapa HOM05D003655 ORTHO05D004065 1.2e-34 152.1 312 32.1
A02p35600 Brassica napus HOM05D003655 ORTHO05D004065 1.5e-34 151.8 329 30.7
BraA02t08562Z Brassica rapa HOM05D003655 ORTHO05D004065 1.5e-34 151.8 329 30.7
BcaB07g30148 Brassica carinata HOM05D003655 ORTHO05D004065 2.0e-34 151.4 320 30.6
C07p36880 Brassica napus HOM05D003655 ORTHO05D004065 2.0e-34 151.4 316 31.6
BolC7t44200H Brassica oleracea HOM05D003655 ORTHO05D004065 2.0e-34 151.4 316 31.6
AT3G27700 Arabidopsis thaliana HOM05D003655 ORTHO05D004065 4.4e-34 150.2 390 28.7
unitig_748.g6986 Utricularia gibba HOM05D003655 ORTHO05D004065 4.4e-34 150.2 586 27.3
SGA_v2.0_scaffold135G34898 Striga asiatica HOM05D003655 ORTHO05D004065 1.3e-33 148.7 523 27.7
THA.LOC104805377 Tarenaya hassleriana HOM05D003655 ORTHO05D004065 2.2e-33 147.9 443 28.0
AL5G17140 Arabidopsis lyrata HOM05D003655 ORTHO05D004065 2.9e-33 147.5 391 28.4
BcaC06g30963 Brassica carinata HOM05D003655 ORTHO05D004065 1.9e-32 144.8 409 28.1
CARHR149170 Cardamine hirsuta HOM05D003655 ORTHO05D004065 2.4e-32 144.4 436 27.3
Sp2g16820 Schrenkiella parvula HOM05D003655 ORTHO05D004065 3.2e-32 144.1 437 26.8
Oeu063478.1 Olea europaea HOM05D003655 ORTHO05D004065 5.4e-32 143.3 517 26.9
CiPaw.04G027900 Carya illinoinensis HOM05D003655 ORTHO05D004065 2.5e-29 134.4 184 41.3
Medtr2g449870 Medicago truncatula HOM05D003655 ORTHO05D004065 5.6e-29 133.3 298 33.2
Pp3c2_22950 Physcomitrium patens HOM05D003655 ORTHO05D004065 6.2e-28 129.8 364 28.0
GSVIVG01032423001 Vitis vinifera HOM05D003655 ORTHO05D004065 2.3e-27 127.9 201 37.8
SMO367G0495 Selaginella moellendorffii HOM05D003655 ORTHO05D004065 8.9e-27 125.9 289 34.6
Mapoly0078s0024 Marchantia polymorpha HOM05D003655 ORTHO05D004065 2.0e-26 124.8 480 26.7
Pp3c1_17760 Physcomitrium patens HOM05D003655 ORTHO05D004065 2.6e-26 124.4 366 29.2
CDE04G0669 Ceratophyllum demersum HOM05D003655 ORTHO05D004065 7.6e-26 122.9 443 27.1
SEGI_07755 Sequoiadendron giganteum HOM05D003655 ORTHO05D004065 2.2e-25 121.3 515 25.4
Atru.chr6.2365 Acer truncatum HOM05D003655 ORTHO05D004065 2.9e-25 120.9 199 39.2
Actinidia16938 Actinidia chinensis HOM05D003655 ORTHO05D004065 2.9e-25 120.9 139 48.9
Atru.chr6.2366 Acer truncatum HOM05D003655 ORTHO05D004065 6.4e-25 119.8 276 33.3
Atru.chr6.2272 Acer truncatum HOM05D003655 ORTHO05D004065 1.4e-24 118.6 142 47.9
Nitab4.5_0002682g0090 Nicotiana tabacum HOM05D003655 ORTHO05D004065 5.4e-24 116.7 96 59.4
Pp3c2_21410 Physcomitrium patens HOM05D003655 ORTHO05D004065 7.8e-23 112.8 460 25.9
SHI22312 Sapria himalayana HOM05D003655 ORTHO05D004065 7.8e-23 112.8 82 63.4
Gohir.A11G066766 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.9e-21 108.2 130 46.9
Prupe.3G289600 Prunus persica HOM05D003655 ORTHO05D004065 4.0e-19 100.5 209 36.4
Pp3c1_20440 Physcomitrium patens HOM05D003655 ORTHO05D004065 2.6e-18 97.8 119 46.2
Nn3g16761 Nelumbo nucifera HOM05D003655 ORTHO05D004065 3.8e-17 94.0 344 27.3
SHI22307 Sapria himalayana HOM05D003655 ORTHO05D004065 1.7e-14 85.1 163 34.4
CBR_g4653 Chara braunii HOM05D003655 ORTHO05D004065 1.9e-13 81.6 94 40.4
Actinidia06004 Actinidia chinensis HOM05D003655 ORTHO05D004065 3.3e-13 80.9 203 30.0
Medtr2g449950 Medicago truncatula HOM05D003655 ORTHO05D004065 2.4e-11 74.7 72 48.6
Haze_14709 Corylus avellana HOM05D003655 ORTHO05D004065 7.6e-10 69.7 95 36.8
CBR_g57010 Chara braunii HOM05D003655 ORTHO05D004065 2.4e-08 64.7 45 53.3


User provided reference genes

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