Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 9.5e-311 1069.7 694 100.0
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 6.4e-299 1030.4 694 97.0
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 6.5e-211 738.0 682 75.4
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 1.5e-210 736.9 698 74.5
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 1.2e-209 733.8 692 73.3
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 1.8e-208 729.9 626 81.5
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 2.3e-208 729.6 685 74.9
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.6e-207 726.1 701 68.0
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.6e-207 726.1 697 71.4
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 3.3e-207 725.7 693 73.4
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 4.4e-207 725.3 676 76.9
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 1.3e-206 723.8 682 71.8
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 3.5e-204 715.7 675 74.4
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 2.9e-203 712.6 680 72.1
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 6.5e-203 711.4 683 74.4
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 7.2e-202 708.0 680 74.3
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 1.6e-201 706.8 696 73.6
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 3.6e-201 705.7 694 72.3
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 6.1e-201 704.9 686 72.6
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 3.0e-200 702.6 678 72.3
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 2.6e-199 699.5 715 66.2
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 3.4e-199 699.1 674 71.2
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.3e-198 697.2 689 68.8
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.7e-198 696.8 689 72.9
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 3.7e-198 695.7 664 72.6
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 4.8e-198 695.3 689 72.9
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 8.3e-198 694.5 693 66.5
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 1.1e-197 694.1 690 72.0
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 1.1e-197 694.1 681 71.2
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 1.4e-197 693.7 682 74.3
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 5.4e-197 691.8 693 72.4
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 5.9e-196 688.3 662 74.9
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.0e-195 687.6 676 73.7
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.7e-195 686.8 669 74.9
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 1.7e-195 686.8 688 63.2
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 2.3e-195 686.4 690 74.3
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 2.3e-195 686.4 676 65.2
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 5.0e-195 685.3 683 69.7
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 5.0e-195 685.3 688 70.3
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 5.0e-195 685.3 690 74.1
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 2.5e-194 682.9 699 67.5
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 5.5e-194 681.8 694 69.7
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 3.6e-193 679.1 647 77.0
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 3.6e-193 679.1 676 74.1
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 4.7e-193 678.7 680 68.5
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 8.0e-193 677.9 679 74.2
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 3.0e-192 676.0 694 69.6
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 3.0e-192 676.0 693 73.4
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 5.2e-192 675.2 690 71.6
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 5.2e-192 675.2 675 69.3
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 8.8e-192 674.5 647 76.8
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 2.6e-191 672.9 667 74.8
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 7.5e-191 671.4 680 72.6
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 3.7e-190 669.1 677 71.3
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 6.3e-190 668.3 678 69.5
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 3.1e-189 666.0 666 68.9
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 5.4e-189 665.2 676 71.2
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 5.4e-189 665.2 689 66.6
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 9.2e-189 664.5 666 69.1
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 9.2e-189 664.5 685 72.7
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 2.7e-188 662.9 674 69.0
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 2.7e-188 662.9 674 69.0
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 3.5e-188 662.5 684 70.0
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 3.5e-188 662.5 671 68.7
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 3.5e-188 662.5 657 73.8
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 4.5e-188 662.1 671 68.9
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 5.9e-188 661.8 671 68.7
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 7.8e-188 661.4 671 68.7
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 1.0e-187 661.0 671 68.7
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 5.0e-187 658.7 687 67.8
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 8.6e-187 657.9 689 66.2
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 1.1e-186 657.5 566 79.0
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 1.5e-186 657.1 662 68.9
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 1.5e-186 657.1 665 70.4
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 1.9e-186 656.8 672 68.5
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.9e-186 656.8 672 68.3
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 4.3e-186 655.6 688 72.4
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 9.5e-186 654.4 670 66.6
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 9.5e-186 654.4 682 68.8
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 2.1e-185 653.3 706 69.7
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 2.1e-185 653.3 701 67.0
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.3e-182 644.0 674 70.0
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 2.2e-182 643.3 664 72.0
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 1.4e-181 640.6 680 69.1
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 2.4e-181 639.8 672 69.3
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 2.4e-181 639.8 682 69.4
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 3.2e-181 639.4 686 69.4
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 4.1e-181 639.0 683 69.0
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 5.4e-181 638.6 683 71.6
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 7.0e-181 638.3 670 72.1
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 2.0e-180 636.7 645 71.8
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 4.6e-180 635.6 654 66.7
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 7.8e-180 634.8 685 66.9
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 3.3e-178 629.4 659 68.4
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 3.3e-178 629.4 672 66.4
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 7.3e-178 628.2 577 68.8
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 2.1e-177 626.7 671 66.5
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 1.4e-176 624.0 672 69.9
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 1.4e-176 624.0 719 58.8
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 3.1e-176 622.9 676 66.0
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 1.5e-175 620.5 703 68.1
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 4.6e-172 609.0 569 73.3
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 3.1e-168 596.3 671 64.5
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 4.0e-168 595.9 641 64.9
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 2.2e-166 590.1 683 66.0
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 4.9e-166 589.0 586 72.4
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 4.3e-162 575.9 608 71.9
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 2.1e-161 573.5 671 54.1
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.0e-155 554.7 528 79.0
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 6.6e-155 552.0 670 61.9
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 2.0e-151 540.4 674 67.8
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 5.4e-149 532.3 529 73.5
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 6.0e-148 528.9 689 55.6
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 6.0e-148 528.9 624 60.7
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 2.1e-140 503.8 729 61.5
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 5.6e-138 495.7 531 72.1
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 7.6e-135 485.3 503 75.3
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 2.9e-134 483.4 674 52.1
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 7.9e-132 475.3 540 70.0
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 5.3e-128 462.6 672 50.9
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 7.1e-125 452.2 674 52.5
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 2.1e-124 450.7 548 59.5
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 4.8e-113 412.9 263 77.9
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 5.9e-111 406.0 483 68.7
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 3.8e-110 403.3 511 58.9
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.1e-106 391.7 301 70.8
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 8.5e-102 375.6 269 71.0
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 6.1e-100 369.4 324 65.1
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 1.3e-94 351.7 451 45.7
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 7.0e-88 329.3 477 57.9
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.1e-80 305.4 223 77.6
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 3.3e-77 293.9 292 88.4
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 3.7e-73 280.4 307 52.4
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 7.0e-72 276.2 241 58.9
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 8.0e-68 262.7 172 84.9
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 1.3e-65 255.4 319 71.2
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 1.1e-64 252.3 188 68.1
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 1.4e-64 251.9 286 52.8
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 1.6e-63 248.4 291 49.8
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 1.1e-51 209.1 301 44.2
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 2.9e-49 201.1 138 71.7
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 3.2e-48 197.6 221 51.1
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 9.2e-48 196.1 305 43.3
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 1.7e-46 191.8 289 78.9
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 1.2e-42 179.1 111 80.2
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 7.6e-42 176.4 87 90.8
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 1.9e-40 171.8 111 77.5
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 4.0e-35 154.1 167 53.9
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 7.1e-32 143.3 322 55.0
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 9.3e-32 142.9 131 53.4
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.3e-30 139.0 201 46.3
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.4e-24 119.0 93 64.5
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.2e-24 117.9 98 64.3
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 5.4e-24 117.1 107 60.7
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.5e-23 114.4 98 64.3
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 1.0e-22 112.8 176 40.9
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 2.5e-21 108.2 388 37.1
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 5.8e-18 97.1 199 34.7
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 3.5e-15 87.8 182 31.3
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 6.0e-15 87.0 69 59.4
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 6.0e-15 87.0 545 29.7
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 6.7e-14 83.6 118 42.4
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.5e-13 81.6 67 62.7
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 7.4e-13 80.1 68 54.4
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 1.3e-12 79.3 62 58.1
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 1.3e-12 79.3 80 52.5
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 3.7e-12 77.8 71 50.7
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 5.3e-11 73.9 56 58.9
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.2e-10 72.8 54 63.0
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 2.5e-08 65.1 68 47.1
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 4.6e-07 60.8 59 47.5
BolC2t09162H Brassica oleracea HOM05D003766 ORTHO05D004607 7.9e-07 60.1 79 46.8
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 1.0e-06 59.7 48 54.2
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 1.3e-06 59.3 71 45.1
BraA05t22403Z Brassica rapa HOM05D003766 ORTHO05D004607 3.9e-06 57.8 44 56.8
Oeu049536.1 Olea europaea HOM05D003766 ORTHO05D004607 6.7e-06 57.0 125 32.8


User provided reference genes

Program Settings