Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 1.4e-203 713.0 446 100.0
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 2.3e-156 556.2 392 92.9
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.1e-146 523.1 452 68.4
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 2.1e-141 506.5 446 78.3
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 5.1e-140 501.9 458 70.5
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 1.1e-137 494.2 451 75.2
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 4.4e-136 488.8 449 69.9
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.3e-135 487.3 451 72.7
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 2.4e-134 483.0 448 70.3
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.4e-134 483.0 450 73.3
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 4.1e-134 482.3 456 73.2
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 3.5e-133 479.2 458 70.7
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 8.6e-132 474.6 445 75.1
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 1.1e-131 474.2 451 74.3
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 5.6e-131 471.9 452 66.8
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 5.6e-131 471.9 450 71.8
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 1.2e-130 470.7 446 61.9
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 1.2e-130 470.7 444 72.3
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 3.6e-130 469.2 455 70.8
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 3.6e-130 469.2 456 71.1
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 4.7e-130 468.8 451 69.6
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 1.4e-129 467.2 448 74.6
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.4e-129 467.2 445 72.4
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 3.1e-129 466.1 448 69.9
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 8.9e-129 464.5 266 87.6
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 2.6e-128 463.0 257 87.5
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 3.4e-128 462.6 448 70.1
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 4.4e-128 462.2 452 71.5
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 7.6e-128 461.5 461 66.4
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 9.9e-128 461.1 460 68.3
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 1.3e-127 460.7 469 67.8
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 2.9e-127 459.5 254 86.6
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 2.9e-127 459.5 445 65.6
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 3.8e-127 459.1 447 67.3
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 3.8e-127 459.1 448 71.2
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 3.8e-127 459.1 451 72.1
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 6.4e-127 458.4 447 65.8
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.1e-126 457.6 448 71.0
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 5.4e-126 455.3 448 71.4
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 7.1e-126 454.9 445 74.2
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 9.2e-126 454.5 436 70.9
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 1.2e-125 454.1 445 67.6
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 1.6e-125 453.8 453 72.6
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 3.5e-125 452.6 435 72.6
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 4.6e-125 452.2 466 65.2
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.3e-124 450.7 448 70.8
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 1.7e-124 450.3 472 62.7
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 3.0e-124 449.5 455 71.4
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 8.7e-124 448.0 449 59.9
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 8.7e-124 448.0 436 69.7
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-123 447.6 429 68.1
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 1.1e-123 447.6 445 73.0
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 1.5e-123 447.2 534 63.5
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 1.5e-123 447.2 456 67.3
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 1.9e-123 446.8 441 68.5
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 3.3e-123 446.0 450 70.9
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.3e-123 445.7 437 70.3
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 9.6e-123 444.5 266 81.2
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.8e-122 443.0 437 70.0
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 2.8e-122 443.0 230 89.1
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.1e-121 441.0 495 63.2
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 1.1e-121 441.0 434 71.2
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 2.0e-120 436.8 447 69.8
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 5.8e-120 435.3 243 85.2
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 7.6e-120 434.9 432 59.7
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 1.3e-119 434.1 437 70.9
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 2.2e-119 433.3 260 83.5
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 4.9e-119 432.2 463 65.4
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 1.1e-118 431.0 447 69.4
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 1.9e-118 430.3 231 88.3
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 5.4e-118 428.7 461 55.3
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 7.1e-118 428.3 464 63.6
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 9.3e-118 427.9 447 68.0
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 6.0e-117 425.2 446 62.6
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 6.0e-117 425.2 446 67.9
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 7.8e-117 424.9 448 60.5
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 3.9e-116 422.5 512 60.2
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 3.9e-116 422.5 450 65.3
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 6.6e-116 421.8 450 64.9
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 6.6e-116 421.8 446 68.2
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 1.1e-115 421.0 229 87.8
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 3.3e-115 419.5 447 65.3
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 4.3e-115 419.1 244 82.4
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 5.6e-115 418.7 233 86.3
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 7.3e-115 418.3 449 59.0
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 7.3e-115 418.3 225 88.9
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 4.8e-114 415.6 447 67.6
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 6.2e-114 415.2 449 65.0
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 8.1e-114 414.8 448 67.6
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 4.0e-113 412.5 446 63.9
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 6.9e-113 411.8 260 76.2
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 9.0e-113 411.4 428 53.5
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.5e-112 410.6 447 66.0
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 7.6e-112 408.3 446 61.2
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 5.4e-110 402.1 256 76.6
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 7.1e-110 401.7 447 64.4
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 6.0e-109 398.7 520 55.4
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 9.6e-107 391.3 228 78.9
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 9.6e-107 391.3 228 78.9
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 2.8e-106 389.8 228 80.3
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 3.7e-106 389.4 524 53.6
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 7.6e-104 381.7 263 71.9
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 2.1e-101 373.6 445 60.0
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 3.0e-100 369.8 246 74.0
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 6.5e-95 352.1 393 69.7
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 1.9e-94 350.5 400 63.8
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.7e-85 320.1 157 91.7
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 2.0e-80 303.9 209 70.8
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 2.5e-78 297.0 149 89.9
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 3.7e-74 283.1 352 63.1
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.5e-72 276.6 137 89.8
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 1.3e-66 258.1 353 66.0
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.7e-66 256.5 334 57.2
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 3.1e-65 253.4 154 81.8
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.2e-64 251.5 144 83.3
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 7.7e-64 248.8 352 63.6
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 2.2e-63 247.3 276 51.8
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 3.0e-60 236.9 175 68.6
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 4.0e-60 236.5 362 59.9
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 4.0e-60 236.5 329 68.4
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 3.4e-59 233.4 218 51.4
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 1.3e-58 231.5 204 53.9
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 2.1e-53 214.2 334 57.5
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 6.1e-53 212.6 111 87.4
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 3.4e-51 206.8 323 63.2
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 2.4e-49 200.7 102 90.2
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.5e-46 191.4 96 89.6
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 2.8e-45 187.2 97 91.8
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 6.1e-45 186.0 412 47.3
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 1.8e-44 184.5 317 58.7
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 9.8e-43 178.7 96 85.4
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 2.9e-42 177.2 97 85.6
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 5.4e-41 172.9 111 77.5
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 5.4e-41 172.9 129 63.6
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 8.6e-39 165.6 84 89.3
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 9.5e-38 162.2 83 88.0
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.6e-37 161.4 86 89.5
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 1.6e-37 161.4 301 59.1
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 8.3e-34 149.1 80 88.8
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 5.4e-33 146.4 80 86.2
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 3.5e-32 143.7 80 86.2
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 6.8e-28 129.4 77 80.5
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 4.4e-27 126.7 84 76.2
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 5.4e-25 119.8 275 41.1
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.1e-25 119.4 268 59.0
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.0e-23 115.5 272 57.4
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 7.3e-22 109.4 74 67.6
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 2.3e-20 104.4 60 83.3
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 3.1e-20 104.0 68 67.6
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 6.8e-20 102.8 306 51.3
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 4.9e-18 96.7 328 46.6
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 1.5e-14 85.1 61 62.3
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 1.4e-12 78.6 43 86.0
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 2.9e-10 70.9 266 50.0
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.3e-06 56.2 109 52.3


User provided reference genes

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