Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5523 Papaver somniferum HOM05D005474 ORTHO05D006551 2.5e-100 368.6 164 100.0
PSO063G4762 Papaver somniferum HOM05D005474 ORTHO05D006551 4.7e-67 258.1 121 91.7
PSO170G1345 Papaver somniferum HOM05D005474 ORTHO05D006551 1.0e-66 256.9 121 91.7
MBI06_g08456_MAGBIO Magnolia biondii HOM05D005474 ORTHO05D006551 9.4e-60 233.8 121 81.0
TAR629G2557 Trochodendron aralioides HOM05D005474 ORTHO05D006551 6.1e-59 231.1 121 81.8
QL02p030435 Quercus lobata HOM05D005474 ORTHO05D006551 1.0e-58 230.3 121 80.2
Aqoxy7G00102 Aquilegia oxysepala HOM05D005474 ORTHO05D006551 1.4e-58 229.9 121 79.3
Lj2C167G11 Lonicera japonica HOM05D005474 ORTHO05D006551 2.3e-58 229.2 121 79.3
MD06G1107100 Malus domestica HOM05D005474 ORTHO05D006551 2.3e-58 229.2 121 79.3
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 3.0e-58 228.8 121 80.2
MD14G1128900 Malus domestica HOM05D005474 ORTHO05D006551 3.0e-58 228.8 121 79.3
Cfa012014 Carpinus fangiana HOM05D005474 ORTHO05D006551 5.2e-58 228.0 121 80.2
Haze_09055 Corylus avellana HOM05D005474 ORTHO05D006551 6.8e-58 227.6 121 80.2
Ciclev10020308m.g Citrus clementina HOM05D005474 ORTHO05D006551 8.8e-58 227.3 121 77.7
Cc08_g16070 Coffea canephora HOM05D005474 ORTHO05D006551 8.8e-58 227.3 121 79.3
Lalb_Chr05g0211531 Lupinus albus HOM05D005474 ORTHO05D006551 8.8e-58 227.3 121 80.2
Actinidia22160 Actinidia chinensis HOM05D005474 ORTHO05D006551 1.5e-57 226.5 121 78.5
RcHm_v2.0_Chr7g0194791 Rosa chinensis HOM05D005474 ORTHO05D006551 2.0e-57 226.1 121 78.5
vmacro11424 Vaccinium macrocarpon HOM05D005474 ORTHO05D006551 2.0e-57 226.1 122 77.0
PGR042G2806 Punica granatum HOM05D005474 ORTHO05D006551 2.6e-57 225.7 121 76.9
CSS0001924 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 3.4e-57 225.3 121 78.5
FvH4_5g04600 Fragaria vesca HOM05D005474 ORTHO05D006551 3.4e-57 225.3 121 77.7
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 3.4e-57 225.3 121 77.7
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 3.4e-57 225.3 121 77.7
Prupe.5G120100 Prunus persica HOM05D005474 ORTHO05D006551 3.4e-57 225.3 121 77.7
FAN04G1263 Fragaria x ananassa HOM05D005474 ORTHO05D006551 5.7e-57 224.6 121 76.9
FAN08G2748 Fragaria x ananassa HOM05D005474 ORTHO05D006551 5.7e-57 224.6 121 76.9
Medtr5g009240 Medicago truncatula HOM05D005474 ORTHO05D006551 5.7e-57 224.6 121 77.7
TPR.G25600 Trifolium pratense HOM05D005474 ORTHO05D006551 5.7e-57 224.6 121 77.7
Peaxi162Scf00074g00931 Petunia axillaris HOM05D005474 ORTHO05D006551 7.5e-57 224.2 119 79.8
CiPaw.11G121500 Carya illinoinensis HOM05D005474 ORTHO05D006551 9.8e-57 223.8 121 77.7
Ca_24501_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 1.3e-56 223.4 121 76.9
Ca_29734_v3 Cicer arietinum L. HOM05D005474 ORTHO05D006551 1.3e-56 223.4 121 76.9
Glyma.11G017200 Glycine max HOM05D005474 ORTHO05D006551 1.3e-56 223.4 118 79.7
GSVIVG01019532001 Vitis vinifera HOM05D005474 ORTHO05D006551 1.7e-56 223.0 121 78.5
Psat2g185600 Pisum sativum HOM05D005474 ORTHO05D006551 2.2e-56 222.6 121 76.9
VMungo1215G0769 Vigna mungo HOM05D005474 ORTHO05D006551 2.2e-56 222.6 121 76.9
Migut.E01253 Erythranthe guttata HOM05D005474 ORTHO05D006551 2.8e-56 222.2 121 76.9
TAR374G0037 Trochodendron aralioides HOM05D005474 ORTHO05D006551 2.8e-56 222.2 121 77.7
ATR0602G179 Amborella trichopoda HOM05D005474 ORTHO05D006551 3.7e-56 221.9 121 76.9
CSS0018913 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 3.7e-56 221.9 121 77.7
ClCG01G001840 Citrullus lanatus HOM05D005474 ORTHO05D006551 4.8e-56 221.5 121 76.9
MELO3C005754.2 Cucumis melo HOM05D005474 ORTHO05D006551 4.8e-56 221.5 121 76.9
HanXRQChr03g0083521 Helianthus annuus HOM05D005474 ORTHO05D006551 4.8e-56 221.5 121 76.9
Sed0014344 Sechium edule HOM05D005474 ORTHO05D006551 4.8e-56 221.5 121 76.0
CSS0034140 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 6.3e-56 221.1 121 77.7
Nitab4.5_0002782g0080 Nicotiana tabacum HOM05D005474 ORTHO05D006551 6.3e-56 221.1 119 78.2
CsaV3_5G001990 Cucumis sativus L. HOM05D005474 ORTHO05D006551 8.3e-56 220.7 121 76.9
Phvul.002G164600 Phaseolus vulgaris HOM05D005474 ORTHO05D006551 8.3e-56 220.7 121 76.0
SalBow8G3265 Salvia bowleyana HOM05D005474 ORTHO05D006551 8.3e-56 220.7 121 76.0
SGA_v2.0_scaffold144G35858 Striga asiatica HOM05D005474 ORTHO05D006551 8.3e-56 220.7 121 74.4
CDE02G2859 Ceratophyllum demersum HOM05D002290 ORTHO05D002532 1.1e-55 220.3 121 76.9
FAN13G0565 Fragaria x ananassa HOM05D005474 ORTHO05D006551 1.1e-55 220.3 121 75.2
Atru.chr9.1979 Acer truncatum HOM05D005474 ORTHO05D006551 1.4e-55 219.9 121 76.0
Sopen08g030580 Solanum pennellii HOM05D005474 ORTHO05D006551 1.8e-55 219.5 119 77.3
PGSC0003DMG400012286 Solanum tuberosum HOM05D005474 ORTHO05D006551 1.8e-55 219.5 119 77.3
Atru.chr9.1994 Acer truncatum HOM05D005474 ORTHO05D006551 2.4e-55 219.2 121 76.0
CAN.G532.121 Capsicum annuum HOM05D005474 ORTHO05D006551 2.4e-55 219.2 119 77.3
Lalb_Chr16g0376951 Lupinus albus HOM05D005474 ORTHO05D006551 2.4e-55 219.2 120 77.5
TAR636G0569 Trochodendron aralioides HOM05D005474 ORTHO05D006551 2.4e-55 219.2 121 79.3
AL7G29500 Arabidopsis lyrata HOM05D005474 ORTHO05D006551 3.1e-55 218.8 121 75.2
CANSAT21G1635 Cannabis sativa HOM05D005474 ORTHO05D006551 3.1e-55 218.8 123 76.4
Eucgr.D01738 Eucalyptus grandis HOM05D005474 ORTHO05D006551 3.1e-55 218.8 121 75.2
Oeu034333.1 Olea europaea HOM05D005474 ORTHO05D006551 3.1e-55 218.8 121 75.2
Oeu063522.1 Olea europaea HOM05D005474 ORTHO05D006551 4.1e-55 218.4 121 75.2
Thhalv10025382m.g Eutrema salsugineum HOM05D005474 ORTHO05D006551 5.4e-55 218.0 121 75.2
Glyma.01G225700 Glycine max HOM05D005474 ORTHO05D006551 5.4e-55 218.0 118 78.0
Rhsim02G0243400 Rhododendron simsii HOM05D005474 ORTHO05D006551 5.4e-55 218.0 121 75.2
Solyc08g082320.3 Solanum lycopersicum HOM05D005474 ORTHO05D006551 5.4e-55 218.0 119 77.3
TWI12G0204 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 7.0e-55 217.6 121 76.0
Hund14220 Selenicereus undatus HOM05D005474 ORTHO05D006551 9.1e-55 217.2 121 74.4
unitig_0.g387 Utricularia gibba HOM05D005474 ORTHO05D006551 9.1e-55 217.2 121 75.2
Lsat_1_v5_gn_6_83981 Lactuca sativa HOM05D005474 ORTHO05D006551 1.2e-54 216.9 114 79.8
AT4G23860 Arabidopsis thaliana HOM05D005474 ORTHO05D006551 1.6e-54 216.5 121 74.4
MSTRG.13885 Avicennia marina HOM05D005474 ORTHO05D006551 1.6e-54 216.5 121 74.4
LjContig00312_ERROPOS870357g0016174 Lotus japonicus HOM05D005474 ORTHO05D006551 2.0e-54 216.1 121 75.2
SalBow1G1678 Salvia bowleyana HOM05D005474 ORTHO05D006551 2.0e-54 216.1 121 73.6
SalBow1G8106 Salvia bowleyana HOM05D005474 ORTHO05D006551 2.0e-54 216.1 121 73.6
CARHR231240 Cardamine hirsuta HOM05D005474 ORTHO05D006551 2.7e-54 215.7 121 73.6
arahy.Tifrunner.gnm1.ann1.1UFI8K Arachis hypogaea HOM05D005474 ORTHO05D006551 3.5e-54 215.3 144 65.3
arahy.Tifrunner.gnm1.ann1.Z0ACGZ Arachis hypogaea HOM05D005474 ORTHO05D006551 3.5e-54 215.3 144 65.3
Sed0020716 Sechium edule HOM05D005474 ORTHO05D006551 3.5e-54 215.3 121 73.6
TWI56G1439 Tripterygium wilfordii HOM05D005474 ORTHO05D006551 4.5e-54 214.9 114 80.7
Carub.0007s1727 Capsella rubella HOM05D005474 ORTHO05D006551 5.9e-54 214.5 121 73.6
Manes.01G049100 Manihot esculenta HOM05D005474 ORTHO05D006551 1.0e-53 213.8 121 75.2
Aa31LG6G7070 Aethionema arabicum HOM05D005474 ORTHO05D006551 2.3e-53 212.6 121 72.7
Cpa.g.sc128.67 Carica papaya HOM05D005474 ORTHO05D006551 2.3e-53 212.6 122 71.3
BcaNung01092 Brassica carinata HOM05D005474 ORTHO05D006551 2.9e-53 212.2 119 74.8
Potri.003G140000 Populus trichocarpa HOM05D005474 ORTHO05D006551 2.9e-53 212.2 121 74.4
AUR62010840 Chenopodium quinoa HOM05D005474 ORTHO05D006551 6.5e-53 211.1 123 70.7
AUR62019839 Chenopodium quinoa HOM05D005474 ORTHO05D006551 6.5e-53 211.1 123 70.7
Sp7g21810 Schrenkiella parvula HOM05D005474 ORTHO05D006551 6.5e-53 211.1 121 72.7
COL.COLO4_10702 Corchorus olitorius HOM05D005474 ORTHO05D006551 8.6e-53 210.7 121 69.4
Duzib084G1138 Durio zibethinus HOM05D005474 ORTHO05D006551 1.1e-52 210.3 121 71.1
Thecc.03G298100 Theobroma cacao HOM05D005474 ORTHO05D006551 1.5e-52 209.9 121 70.2
Sabra01G0068000 Salix brachista HOM05D005474 ORTHO05D006551 1.9e-52 209.5 121 73.6
HPP92_026770 Vanilla planifolia HOM05D005474 ORTHO05D006551 2.5e-52 209.1 121 71.1
THA.LOC104806435 Tarenaya hassleriana HOM05D005474 ORTHO05D006551 5.5e-52 208.0 114 75.4
EL10Ac5g12915 Beta vulgaris HOM05D005474 ORTHO05D006551 2.8e-51 205.7 121 70.2
Potri.001G091600 Populus trichocarpa HOM05D005474 ORTHO05D006551 4.7e-51 204.9 116 75.9
ECA240G1977 Erigeron canadensis HOM05D005474 ORTHO05D006551 1.0e-50 203.8 122 69.7
Gohir.A12G236400 Gossypium hirsutum HOM05D005474 ORTHO05D006551 1.8e-50 203.0 113 73.5
Gohir.D12G237600 Gossypium hirsutum HOM05D005474 ORTHO05D006551 1.8e-50 203.0 113 73.5
Gorai.008G254400 Gossypium raimondii HOM05D005474 ORTHO05D006551 1.8e-50 203.0 113 73.5
Sc22g0005000 Simmondsia chinensis HOM05D005474 ORTHO05D006551 1.8e-50 203.0 121 70.2
BraA01t01454Z Brassica rapa HOM05D005474 ORTHO05D006551 3.0e-50 202.2 119 71.4
Pp3c18_8230 Physcomitrium patens HOM05D005474 ORTHO05D006551 4.0e-50 201.8 118 70.3
Sabra03G0101000 Salix brachista HOM05D005474 ORTHO05D006551 5.2e-50 201.4 136 65.4
PGSC0003DMG401028714 Solanum tuberosum HOM05D005474 ORTHO05D006551 6.8e-50 201.1 119 70.6
A01p15160 Brassica napus HOM05D005474 ORTHO05D006551 8.9e-50 200.7 119 70.6
Os06g0529800 Oryza sativa ssp. japonica HOM05D005474 ORTHO05D006551 1.5e-49 199.9 121 66.9
BcaC09g50941 Brassica carinata HOM05D005474 ORTHO05D006551 2.0e-49 199.5 119 69.7
C01p19060 Brassica napus HOM05D005474 ORTHO05D006551 2.0e-49 199.5 119 69.7
BolC1t01832H Brassica oleracea HOM05D005474 ORTHO05D006551 2.6e-49 199.1 119 69.7
Mapoly0095s0049 Marchantia polymorpha HOM05D005474 ORTHO05D006551 9.8e-49 197.2 118 66.9
Pp3c7_4800 Physcomitrium patens HOM05D005474 ORTHO05D006551 6.3e-48 194.5 120 67.5
Zm00001eb277940 Zea mays HOM05D005474 ORTHO05D006551 1.4e-47 193.4 121 66.1
SMO200G0193 Selaginella moellendorffii HOM05D005474 ORTHO05D006551 5.9e-46 188.0 121 64.5
CBR_g50475 Chara braunii HOM05D005474 ORTHO05D006551 6.6e-45 184.5 124 61.3
CiPaw.12G083000 Carya illinoinensis HOM05D005474 ORTHO05D006551 8.6e-45 184.1 121 64.5
CSS0004779 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.9e-40 169.1 95 75.8
CSS0021446 Camellia sinensis var. sinensis HOM05D005474 ORTHO05D006551 2.9e-40 169.1 91 78.0
Hma1.2p1_1746F.1_g300392 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 2.9e-40 169.1 89 77.5
Hma1.2p1_1746F.1_g300400 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 2.9e-40 169.1 89 77.5
SEGI_30990 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 3.9e-37 158.7 89 69.7
DCAR_027700 Daucus carota HOM05D005474 ORTHO05D006551 6.6e-21 104.8 67 61.2
Cfa025394 Carpinus fangiana HOM05D005474 ORTHO05D122676 1.9e-15 86.7 145 35.9
Nn3g19016 Nelumbo nucifera HOM05D005474 ORTHO05D006551 1.1e-10 70.9 61 57.4
SHI06991 Sapria himalayana HOM05D005474 ORTHO05D006551 4.0e-10 68.9 38 76.3
Duzib084G0281 Durio zibethinus HOM05D005474 ORTHO05D006551 2.0e-09 66.6 34 79.4
PGSC0003DMG400011405 Solanum tuberosum HOM05D005474 ORTHO05D006551 7.6e-09 64.7 35 71.4
Hma1.2p1_1746F.1_g300390 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 6.4e-08 61.6 30 86.7
Hma1.2p1_1746F.1_g300398 Hydrangea macrophylla HOM05D005474 ORTHO05D006551 6.4e-08 61.6 30 86.7
SEGI_08425 Sequoiadendron giganteum HOM05D005474 ORTHO05D006551 1.1e-07 60.8 33 75.8


User provided reference genes

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