Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.9e-119 432.6 227 100.0
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 1.8e-117 426.0 227 98.2
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 8.4e-99 364.0 227 83.3
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 9.3e-98 360.5 227 81.1
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 5.8e-92 341.3 227 77.1
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 2.9e-91 339.0 227 76.7
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 2.9e-91 339.0 227 77.5
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 3.8e-91 338.6 227 76.7
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 6.4e-91 337.8 225 77.3
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 6.4e-91 337.8 227 77.1
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.4e-90 336.7 227 75.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 3.2e-90 335.5 227 76.7
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.2e-89 333.6 227 74.9
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.6e-89 333.2 227 75.3
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 1.6e-89 333.2 225 75.6
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 2.1e-89 332.8 227 77.1
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 2.7e-89 332.4 218 79.4
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.6e-89 331.6 227 74.9
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 7.8e-89 330.9 227 74.9
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.0e-88 330.5 227 74.9
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 1.3e-88 330.1 227 76.2
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 1.3e-88 330.1 227 74.9
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 1.7e-88 329.7 227 72.7
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.3e-88 329.3 227 75.8
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.3e-88 329.3 250 70.4
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 3.0e-88 328.9 227 75.8
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 3.9e-88 328.6 224 75.9
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 5.1e-88 328.2 227 74.9
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 5.1e-88 328.2 227 74.9
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 8.7e-88 327.4 227 74.0
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 3.3e-87 325.5 225 73.3
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 3.3e-87 325.5 225 72.9
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 4.3e-87 325.1 227 73.6
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 5.6e-87 324.7 227 73.6
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 1.3e-86 323.6 237 71.7
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 2.8e-86 322.4 225 72.4
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 2.8e-86 322.4 227 74.0
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 4.8e-86 321.6 227 72.7
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 4.8e-86 321.6 227 72.2
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 4.8e-86 321.6 227 71.8
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 6.2e-86 321.2 227 73.6
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 6.2e-86 321.2 227 72.7
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 8.1e-86 320.9 227 72.7
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 3.1e-85 318.9 224 72.8
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 5.3e-85 318.2 227 73.1
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 6.9e-85 317.8 224 71.9
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 2.0e-84 316.2 225 73.3
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 2.0e-84 316.2 225 73.3
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 2.0e-84 316.2 225 73.3
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.4e-84 315.5 221 73.3
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 3.4e-84 315.5 227 72.2
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 4.5e-84 315.1 227 71.8
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 5.8e-84 314.7 267 64.4
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 7.6e-84 314.3 225 71.6
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 2.2e-83 312.8 224 71.9
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 8.4e-83 310.8 228 71.1
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 8.4e-83 310.8 224 69.6
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 5.4e-82 308.1 210 76.2
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 9.3e-82 307.4 222 71.6
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 9.3e-82 307.4 260 64.2
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 9.3e-82 307.4 227 71.4
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 1.6e-81 306.6 225 70.2
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 3.5e-81 305.4 227 68.7
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 6.0e-81 304.7 227 67.8
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.0e-80 303.9 227 70.0
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 1.3e-80 303.5 227 67.4
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.3e-80 303.5 224 67.9
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.0e-80 302.4 221 70.6
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.3e-79 298.9 215 71.6
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 1.3e-78 297.0 207 72.9
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 3.7e-78 295.4 227 65.2
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 4.8e-78 295.0 225 67.1
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 4.8e-78 295.0 210 69.5
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.4e-77 292.7 225 68.4
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 3.1e-77 292.4 224 68.8
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 4.0e-77 292.0 227 65.6
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 4.0e-77 292.0 227 65.6
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.5e-76 290.0 227 64.3
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.5e-76 290.0 227 64.3
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 4.5e-76 288.5 227 64.8
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 5.8e-76 288.1 227 68.3
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 5.8e-76 288.1 227 66.5
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 7.6e-76 287.7 227 63.9
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 7.6e-76 287.7 227 63.9
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 7.6e-76 287.7 227 63.9
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 4.9e-75 285.0 242 66.9
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 4.9e-75 285.0 224 67.0
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 6.5e-75 284.6 203 70.9
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.1e-74 283.9 227 65.6
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 1.1e-74 283.9 224 67.0
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 2.1e-73 279.6 194 73.2
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.1e-71 273.9 207 68.1
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 1.9e-71 273.1 195 73.8
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 3.3e-71 272.3 227 64.3
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 4.8e-70 268.5 227 61.2
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 4.8e-70 268.5 207 66.7
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 1.2e-68 263.8 222 62.6
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 5.8e-68 261.5 198 68.2
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 8.4e-67 257.7 223 61.9
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 1.8e-64 250.0 221 58.4
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.5e-63 246.9 193 65.8
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 1.1e-61 240.7 222 58.1
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.4e-61 239.6 222 57.7
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.4e-61 239.6 222 57.7
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 1.5e-55 220.3 204 52.9
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 1.4e-48 197.2 213 49.8
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 3.7e-46 189.1 180 58.9
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 9.1e-45 184.5 139 65.5
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.5e-44 183.7 196 46.9
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 2.6e-36 156.4 187 50.8
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 4.8e-30 135.6 94 68.1
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.0e-27 127.9 99 70.7
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.5e-26 123.2 163 48.5
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 4.3e-18 95.9 220 29.1
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 2.1e-17 93.6 195 30.8
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 2.3e-11 73.6 217 28.1
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 1.4e-08 64.3 106 45.3
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 9.8e-07 58.2 95 43.2


User provided reference genes

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