Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 8.3e-205 716.8 372 100.0
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 9.2e-196 686.8 372 95.4
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 4.5e-134 481.9 375 68.5
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 2.2e-128 463.0 383 66.1
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 5.7e-121 438.3 381 61.9
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 1.3e-120 437.2 382 61.8
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.1e-119 434.1 382 61.3
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 5.4e-119 431.8 382 61.0
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 5.4e-119 431.8 382 59.7
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 5.4e-119 431.8 382 61.0
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 7.0e-119 431.4 382 60.7
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 2.0e-118 429.9 383 60.1
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 4.5e-118 428.7 382 59.2
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.0e-117 427.6 382 61.0
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 3.8e-117 425.6 382 58.9
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 2.5e-116 422.9 382 59.7
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 9.5e-116 421.0 390 58.2
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 1.6e-115 420.2 382 59.2
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 2.8e-115 419.5 382 59.4
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 6.8e-114 414.8 389 58.4
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 8.8e-114 414.5 378 57.9
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 4.4e-113 412.1 372 62.1
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 6.3e-112 408.3 384 58.3
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 1.1e-111 407.5 383 58.7
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 1.4e-111 407.1 381 58.0
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 5.4e-111 405.2 381 58.3
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.7e-109 400.2 382 56.0
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 2.9e-109 399.4 382 55.8
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 5.0e-109 398.7 382 56.5
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 5.0e-109 398.7 387 56.3
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 8.6e-109 397.9 382 55.5
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.3e-108 396.0 385 56.6
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 5.6e-108 395.2 382 56.3
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 7.3e-108 394.8 372 60.2
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.6e-107 393.7 386 56.2
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 2.1e-107 393.3 382 55.0
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 2.1e-107 393.3 382 57.1
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 2.8e-107 392.9 380 55.5
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.6e-107 392.5 385 56.1
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 6.1e-107 391.7 382 55.2
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.4e-106 390.6 377 56.5
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 2.2e-104 383.3 371 56.6
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 1.8e-103 380.2 378 55.8
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 4.1e-103 379.0 394 55.3
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 5.4e-103 378.6 382 57.3
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 7.0e-103 378.3 382 53.4
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 9.2e-103 377.9 371 56.1
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 5.9e-102 375.2 382 55.5
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 1.0e-101 374.4 383 55.6
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 1.3e-101 374.0 381 54.1
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 2.3e-101 373.2 384 55.2
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 5.0e-101 372.1 384 54.9
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 8.6e-101 371.3 382 53.9
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 1.5e-100 370.5 382 55.2
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 5.6e-100 368.6 378 54.5
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 5.6e-100 368.6 385 55.1
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 9.5e-100 367.9 382 53.7
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 4.7e-99 365.5 384 53.9
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 4.7e-99 365.5 375 53.9
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 6.2e-99 365.2 337 56.1
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 6.2e-99 365.2 382 55.2
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 1.4e-98 364.0 381 53.0
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 1.4e-98 364.0 382 55.8
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 1.8e-98 363.6 378 54.0
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 2.3e-98 363.2 381 53.3
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 4.0e-98 362.5 383 53.3
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 2.0e-97 360.1 378 53.4
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 3.4e-97 359.4 386 52.3
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 5.8e-97 358.6 386 52.1
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 7.5e-97 358.2 382 53.1
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 7.5e-97 358.2 382 53.1
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 7.5e-97 358.2 379 53.8
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 9.8e-97 357.8 385 52.7
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 3.7e-96 355.9 378 54.5
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 8.3e-96 354.8 385 52.2
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 4.1e-95 352.4 386 53.1
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 5.4e-95 352.1 381 53.5
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.2e-94 350.9 405 50.1
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 2.7e-94 349.7 383 52.5
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 6.0e-94 348.6 403 51.9
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 7.8e-94 348.2 384 52.6
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 1.0e-93 347.8 401 50.4
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 3.3e-92 342.8 386 48.4
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 4.3e-92 342.4 387 50.4
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 2.1e-91 340.1 381 50.4
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 3.1e-90 336.3 386 51.0
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 2.0e-89 333.6 372 51.3
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 4.6e-86 322.4 386 47.4
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 2.1e-83 313.5 372 49.7
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 2.8e-83 313.2 379 49.3
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 7.6e-81 305.1 333 51.4
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 4.2e-71 272.7 288 55.6
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 1.9e-68 263.8 261 53.3
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 4.3e-68 262.7 257 54.5
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 5.6e-68 262.3 199 65.8
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 8.4e-64 248.4 385 42.1
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.4e-63 247.7 392 41.1
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 2.9e-56 223.4 378 39.2
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 6.4e-56 222.2 322 45.3
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 1.6e-54 217.6 230 54.8
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 1.1e-50 204.9 175 58.9
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 4.2e-47 193.0 234 48.7
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 6.7e-45 185.7 375 35.2
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.1e-44 184.9 166 57.2
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 9.0e-42 175.3 263 43.3
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 1.5e-41 174.5 175 58.3
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 2.9e-40 170.2 385 34.0
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.2e-38 164.9 173 55.5
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 9.7e-36 155.2 173 53.2
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 2.9e-32 143.7 161 48.4
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 9.4e-31 138.7 167 47.9
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.5e-28 131.3 187 41.2
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 2.0e-28 131.0 159 50.3
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.4e-28 129.8 187 41.2
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.8e-26 124.4 159 45.3
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 4.4e-20 103.2 160 33.1
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.4e-18 97.4 145 46.9
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.2e-15 86.7 92 46.7
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.2e-15 86.7 92 46.7
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 5.2e-13 79.7 81 50.6
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 1.2e-12 78.6 70 57.1
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 3.5e-09 67.0 82 40.2
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 1.3e-08 65.1 432 24.5
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 5.5e-07 59.7 73 41.1


User provided reference genes

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