Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.8e-81 305.8 150 100.0
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 3.9e-76 288.1 153 94.1
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 1.7e-47 193.0 154 67.5
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.9e-46 189.5 109 78.9
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 1.9e-46 189.5 111 78.4
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 3.2e-46 188.7 120 71.7
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 5.4e-46 188.0 154 62.3
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.2e-45 186.8 122 71.3
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.2e-45 186.8 134 67.2
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 1.6e-45 186.4 111 77.5
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 2.1e-45 186.0 110 77.3
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 2.1e-45 186.0 108 77.8
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 3.5e-45 185.3 132 66.7
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 6.0e-45 184.5 151 63.6
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 6.0e-45 184.5 143 65.0
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 7.8e-45 184.1 142 63.4
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 7.8e-45 184.1 109 76.1
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 1.0e-44 183.7 110 75.5
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 1.3e-44 183.3 120 70.0
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.7e-44 183.0 149 65.8
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 2.3e-44 182.6 111 78.4
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 3.9e-44 181.8 126 69.0
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 3.9e-44 181.8 138 63.0
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 5.1e-44 181.4 115 70.4
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 5.1e-44 181.4 115 70.4
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 5.1e-44 181.4 109 74.3
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 5.1e-44 181.4 121 70.2
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 6.6e-44 181.0 113 74.3
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 8.7e-44 180.6 113 73.5
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 8.7e-44 180.6 119 68.1
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 1.1e-43 180.3 107 75.7
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.1e-43 180.3 107 75.7
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.5e-43 179.9 155 61.3
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.5e-43 179.9 108 75.9
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 1.9e-43 179.5 111 71.2
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 1.9e-43 179.5 111 73.0
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 1.9e-43 179.5 115 72.2
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 2.5e-43 179.1 135 63.0
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 3.3e-43 178.7 118 71.2
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 4.3e-43 178.3 108 73.1
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 4.3e-43 178.3 108 74.1
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 4.3e-43 178.3 108 74.1
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 4.3e-43 178.3 111 73.0
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 5.6e-43 177.9 123 68.3
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 5.6e-43 177.9 123 68.3
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 5.6e-43 177.9 123 68.3
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 5.6e-43 177.9 155 60.0
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 5.6e-43 177.9 120 70.0
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 5.6e-43 177.9 120 70.8
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 7.3e-43 177.6 123 68.3
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 9.6e-43 177.2 111 73.9
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 9.6e-43 177.2 111 73.9
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 9.6e-43 177.2 111 73.9
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 9.6e-43 177.2 107 74.8
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 1.3e-42 176.8 108 74.1
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.6e-42 176.4 132 63.6
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 1.6e-42 176.4 134 61.9
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 1.6e-42 176.4 119 68.1
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 2.1e-42 176.0 110 70.9
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 2.8e-42 175.6 108 73.1
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 2.8e-42 175.6 108 73.1
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 2.8e-42 175.6 111 69.4
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 2.8e-42 175.6 110 69.1
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 2.8e-42 175.6 123 67.5
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 3.6e-42 175.3 108 74.1
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 3.6e-42 175.3 121 67.8
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 3.6e-42 175.3 152 57.2
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 8.1e-42 174.1 113 70.8
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 8.1e-42 174.1 113 70.8
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 8.1e-42 174.1 108 71.3
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 8.1e-42 174.1 117 68.4
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 8.1e-42 174.1 112 73.2
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 2.4e-41 172.6 105 73.3
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 2.4e-41 172.6 113 69.0
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 4.0e-41 171.8 113 69.9
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 6.9e-41 171.0 108 72.2
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 9.0e-41 170.6 134 59.7
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 1.2e-40 170.2 108 70.4
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.5e-40 169.9 120 66.7
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.6e-40 169.1 111 68.5
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 3.4e-40 168.7 109 69.7
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 3.4e-40 168.7 122 64.8
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 7.6e-40 167.5 121 66.9
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 9.9e-40 167.2 131 60.3
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 9.9e-40 167.2 108 68.5
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 9.9e-40 167.2 113 66.4
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 6.4e-39 164.5 112 67.9
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 8.4e-39 164.1 111 67.6
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 8.4e-39 164.1 106 68.9
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 1.1e-38 163.7 138 58.0
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 2.1e-37 159.5 143 55.2
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 2.7e-37 159.1 111 65.8
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 4.6e-37 158.3 109 63.3
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 2.3e-36 156.0 153 54.2
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.1e-36 154.8 97 74.2
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 8.7e-36 154.1 109 64.2
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 3.3e-35 152.1 161 49.7
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 1.6e-34 149.8 152 50.0
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 4.0e-33 145.2 142 52.8
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 6.9e-33 144.4 141 51.1
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.5e-32 143.3 97 70.1
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.0e-32 142.9 97 70.1
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 4.2e-30 135.2 106 56.6
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 6.0e-29 131.3 112 54.5
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 3.0e-28 129.0 112 54.5
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 2.6e-24 115.9 105 49.5
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 6.5e-23 111.3 93 55.9
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 8.7e-20 100.9 57 77.2
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 8.7e-20 100.9 88 61.4
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.6e-18 96.7 99 52.5
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 2.4e-17 92.8 97 45.4
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 5.3e-17 91.7 58 67.2
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 8.5e-15 84.3 53 69.8
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 1.9e-14 83.2 62 59.7
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 4.2e-14 82.0 53 66.0
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 1.2e-13 80.5 49 71.4
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.2e-13 80.5 64 57.8
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 1.6e-13 80.1 51 68.6
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 3.6e-13 79.0 48 70.8
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 3.6e-13 79.0 50 68.0
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 2.3e-12 76.3 44 72.7
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 5.3e-09 65.1 94 40.4


User provided reference genes

Program Settings