Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3506 Papaver somniferum HOM05D005629 ORTHO05D008000 1.9e-176 622.5 326 100.0
Aqoxy3G01541 Aquilegia oxysepala HOM05D005629 ORTHO05D008000 1.7e-140 503.1 309 82.8
Cfa007230 Carpinus fangiana HOM05D005629 ORTHO05D008000 3.8e-137 491.9 335 78.2
CiPaw.03G055300 Carya illinoinensis HOM05D005629 ORTHO05D008000 7.2e-136 487.6 336 77.1
Actinidia36200 Actinidia chinensis HOM05D005629 ORTHO05D008000 9.4e-136 487.3 302 82.1
Haze_14872 Corylus avellana HOM05D005629 ORTHO05D008000 4.7e-135 485.0 325 78.8
FAN09G2642 Fragaria x ananassa HOM05D005629 ORTHO05D008000 4.7e-135 485.0 325 76.0
QL02p071469 Quercus lobata HOM05D005629 ORTHO05D008000 6.1e-135 484.6 338 76.9
FvH4_6g53470 Fragaria vesca HOM05D005629 ORTHO05D008000 1.0e-134 483.8 325 76.6
GSVIVG01033097001 Vitis vinifera HOM05D005629 ORTHO05D008000 1.4e-134 483.4 327 77.7
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla HOM05D005629 ORTHO05D008000 1.8e-134 483.0 328 76.8
AL5G16240 Arabidopsis lyrata HOM05D005629 ORTHO05D008000 6.7e-134 481.1 289 82.4
COL.COLO4_17207 Corchorus olitorius HOM05D005629 ORTHO05D008000 8.8e-134 480.7 298 80.2
Dinv33339 Davidia involucrata HOM05D005629 ORTHO05D008000 8.8e-134 480.7 321 77.3
Prupe.3G305800 Prunus persica HOM05D005629 ORTHO05D008000 1.2e-133 480.3 333 76.0
DCAR_011309 Daucus carota HOM05D005629 ORTHO05D008000 5.7e-133 478.0 318 78.3
BcaC06g33860 Brassica carinata HOM05D005629 ORTHO05D008000 7.5e-133 477.6 307 78.8
A06p41480 Brassica napus HOM05D005629 ORTHO05D008000 9.7e-133 477.2 307 78.8
BraA06t27073Z Brassica rapa HOM05D005629 ORTHO05D008000 9.7e-133 477.2 307 78.8
MD09G1011200 Malus domestica HOM05D005629 ORTHO05D008000 9.7e-133 477.2 329 76.0
Sp2g16240 Schrenkiella parvula HOM05D005629 ORTHO05D008000 9.7e-133 477.2 304 78.9
C07p36170 Brassica napus HOM05D005629 ORTHO05D008000 1.3e-132 476.9 307 78.8
CAN.G1751.5 Capsicum annuum HOM05D005629 ORTHO05D008000 1.3e-132 476.9 290 81.7
Nitab4.5_0000559g0400 Nicotiana tabacum HOM05D005629 ORTHO05D008000 1.3e-132 476.9 313 78.6
PGSC0003DMG400013378 Solanum tuberosum HOM05D005629 ORTHO05D008000 1.3e-132 476.9 293 81.6
Gohir.D07G235300 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.7e-132 476.5 303 77.9
BolC7t44133H Brassica oleracea HOM05D005629 ORTHO05D008000 2.2e-132 476.1 307 78.5
AT3G27110 Arabidopsis thaliana HOM05D005629 ORTHO05D008000 2.8e-132 475.7 289 81.7
Thhalv10004520m.g Eutrema salsugineum HOM05D005629 ORTHO05D008000 2.8e-132 475.7 307 78.5
BcaC06g31019 Brassica carinata HOM05D005629 ORTHO05D008000 8.2e-132 474.2 307 78.8
BcaC06g33857 Brassica carinata HOM05D005629 ORTHO05D008000 8.2e-132 474.2 307 78.8
CSS0048682 Camellia sinensis var. sinensis HOM05D005629 ORTHO05D004503 8.2e-132 474.2 294 81.3
Lju41A52T99 Lonicera japonica HOM05D005629 ORTHO05D008000 1.1e-131 473.8 310 79.0
ClCG05G013480 Citrullus lanatus HOM05D005629 ORTHO05D008000 1.4e-131 473.4 277 83.0
RcHm_v2.0_Chr2g0175511 Rosa chinensis HOM05D005629 ORTHO05D008000 1.4e-131 473.4 323 75.2
Cc07_g00800 Coffea canephora HOM05D005629 ORTHO05D008000 1.8e-131 473.0 283 82.0
Gorai.001G271100 Gossypium raimondii HOM05D005629 ORTHO05D008000 1.8e-131 473.0 304 78.0
Nitab4.5_0005161g0130 Nicotiana tabacum HOM05D005629 ORTHO05D008000 1.8e-131 473.0 306 79.1
HanXRQChr17g0550111 Helianthus annuus HOM05D005629 ORTHO05D008000 3.1e-131 472.2 306 77.8
Carub.0005s0536 Capsella rubella HOM05D005629 ORTHO05D008000 4.1e-131 471.9 340 72.4
Eucgr.I01649 Eucalyptus grandis HOM05D005629 ORTHO05D008000 4.1e-131 471.9 316 76.6
Thecc.04G035600 Theobroma cacao HOM05D005629 ORTHO05D008000 4.1e-131 471.9 304 77.0
Atru.chr6.2566 Acer truncatum HOM05D005629 ORTHO05D008000 7.0e-131 471.1 321 75.1
Actinidia05920 Actinidia chinensis HOM05D005629 ORTHO05D008000 9.1e-131 470.7 302 80.5
Solyc03g005000.4 Solanum lycopersicum HOM05D005629 ORTHO05D008000 9.1e-131 470.7 293 80.5
Sopen03g001010 Solanum pennellii HOM05D005629 ORTHO05D008000 9.1e-131 470.7 293 80.5
Aa31LG2G5490 Aethionema arabicum HOM05D005629 ORTHO05D008000 2.0e-130 469.5 307 77.9
Sc03g0006560 Simmondsia chinensis HOM05D005629 ORTHO05D008000 2.0e-130 469.5 329 73.9
Cpa.g.sc171.18 Carica papaya HOM05D005629 ORTHO05D008000 2.7e-130 469.2 293 77.5
THA.LOC104825621 Tarenaya hassleriana HOM05D005629 ORTHO05D008000 3.5e-130 468.8 285 81.1
Lj1g0025061 Lotus japonicus HOM05D005629 ORTHO05D008000 4.5e-130 468.4 307 78.2
Sed0004120 Sechium edule HOM05D005629 ORTHO05D008000 4.5e-130 468.4 318 75.8
TWI56G1125 Tripterygium wilfordii HOM05D005629 ORTHO05D008000 4.5e-130 468.4 305 77.0
Ciclev10015840m.g Citrus clementina HOM05D005629 ORTHO05D008000 1.0e-129 467.2 313 75.4
ECA246G2396 Erigeron canadensis HOM05D005629 ORTHO05D008000 1.3e-129 466.8 301 76.7
Peaxi162Scf00700g00023 Petunia axillaris HOM05D005629 ORTHO05D008000 1.7e-129 466.5 337 72.4
Migut.F00066 Erythranthe guttata HOM05D005629 ORTHO05D008000 2.2e-129 466.1 293 78.2
CANSAT64G1539 Cannabis sativa HOM05D005629 ORTHO05D008000 2.9e-129 465.7 303 77.9
PGR142G0641 Punica granatum HOM05D005629 ORTHO05D008000 2.9e-129 465.7 311 76.2
Gohir.A11G064500 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.8e-129 465.3 339 71.1
CsaV3_3G027030 Cucumis sativus L. HOM05D005629 ORTHO05D008000 5.0e-129 464.9 331 72.8
Gohir.D11G068800 Gossypium hirsutum HOM05D005629 ORTHO05D008000 8.5e-129 464.2 339 70.8
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea HOM05D005629 ORTHO05D008000 1.1e-128 463.8 326 73.3
ATR0561G239 Amborella trichopoda HOM05D005629 ORTHO05D008000 1.5e-128 463.4 291 79.0
Gohir.A07G228100 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.9e-128 463.0 327 73.4
Ca_26782_v3 Cicer arietinum L. HOM05D005629 ORTHO05D008000 2.5e-128 462.6 328 74.1
Glyma.16G056900 Glycine max HOM05D005629 ORTHO05D008000 9.4e-128 460.7 329 72.9
Gorai.007G073600 Gossypium raimondii HOM05D005629 ORTHO05D008000 9.4e-128 460.7 340 70.9
Medtr7g033405 Medicago truncatula HOM05D005629 ORTHO05D008000 1.6e-127 459.9 314 74.8
SGA_v2.0_scaffold253G45198 Striga asiatica HOM05D005629 ORTHO05D008000 2.1e-127 459.5 319 74.0
SalBow4G2288 Salvia bowleyana HOM05D005629 ORTHO05D008000 4.7e-127 458.4 307 74.9
TPR.G38340 Trifolium pratense HOM05D005629 ORTHO05D008000 4.7e-127 458.4 308 75.6
Psat3g164800 Pisum sativum HOM05D005629 ORTHO05D008000 8.0e-127 457.6 305 75.7
Oeu058781.1 Olea europaea HOM05D005629 ORTHO05D008000 1.0e-126 457.2 316 74.7
VMungo1383G2395 Vigna mungo HOM05D005629 ORTHO05D008000 1.4e-126 456.8 332 72.0
Phvul.001G094100 Phaseolus vulgaris HOM05D005629 ORTHO05D008000 2.3e-126 456.1 332 71.7
Lalb_Chr14g0363391 Lupinus albus HOM05D005629 ORTHO05D008000 3.0e-126 455.7 324 72.8
EL10Ac6g15359 Beta vulgaris HOM05D005629 ORTHO05D008000 2.0e-125 453.0 308 72.7
Potri.001G330800 Populus trichocarpa HOM05D005629 ORTHO05D008000 2.6e-125 452.6 323 72.8
unitig_52.g17654 Utricularia gibba HOM05D005629 ORTHO05D008000 9.8e-125 450.7 309 74.4
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 1.4e-123 446.8 318 73.0
Os01g0970700 Oryza sativa ssp. japonica HOM05D005629 ORTHO05D008000 9.1e-123 444.1 276 78.3
HPP92_024304 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.6e-122 443.4 276 77.5
Zm00001eb127160 Zea mays HOM05D005629 ORTHO05D008000 2.7e-122 442.6 272 78.7
Mapoly0033s0112 Marchantia polymorpha HOM05D005629 ORTHO05D008000 1.7e-121 439.9 288 75.7
HPP92_024293 Vanilla planifolia HOM05D005629 ORTHO05D008000 2.9e-121 439.1 275 77.5
Rhsim10G0006600 Rhododendron simsii HOM05D005629 ORTHO05D008000 5.0e-121 438.3 318 74.2
Ah.02g120470 Amaranthus hybridus HOM05D005629 ORTHO05D008000 1.5e-120 436.8 320 70.0
SEGI_10761 Sequoiadendron giganteum HOM05D005629 ORTHO05D008000 9.5e-120 434.1 307 72.3
vmacro05954 Vaccinium macrocarpon HOM05D005629 ORTHO05D008000 1.4e-118 430.3 316 72.5
Migut.H00778 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.8e-118 429.9 262 81.7
Duzib264G0865 Durio zibethinus HOM05D005629 ORTHO05D008000 2.8e-116 422.5 328 68.6
Hund04337 Selenicereus undatus HOM05D005629 ORTHO05D008000 1.3e-113 413.7 327 64.5
Nn4g22342 Nelumbo nucifera HOM05D005629 ORTHO05D008000 2.6e-109 399.4 334 68.9
Migut.K01513 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.8e-107 393.3 273 75.1
Dinv25662 Davidia involucrata HOM05D005629 ORTHO05D000552 7.8e-106 387.9 228 84.2
AUR62003511 Chenopodium quinoa HOM05D005629 ORTHO05D008000 9.8e-101 370.9 243 74.5
Gorai.004G126700 Gossypium raimondii HOM05D005629 ORTHO05D008000 2.2e-100 369.8 237 77.2
Gohir.D08G117950 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.5e-98 362.5 235 76.2
AUR62017822 Chenopodium quinoa HOM05D005629 ORTHO05D008000 2.3e-97 359.8 235 74.9
Migut.G01029 Erythranthe guttata HOM05D005629 ORTHO05D008000 3.0e-97 359.4 244 77.0
Cre14.g620150 Chlamydomonas reinhardtii HOM05D005629 ORTHO05D008000 6.6e-97 358.2 269 63.6
MCO03G471 Micromonas commoda HOM05D005629 ORTHO05D008000 2.8e-95 352.8 258 65.9
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis HOM05D005629 ORTHO05D008000 8.9e-94 347.8 207 80.2
FAN05G5024 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.1e-90 336.7 239 73.2
FAN02G3075 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.3e-89 333.2 245 72.2
Manes.15G160600 Manihot esculenta HOM05D005629 ORTHO05D008000 2.3e-89 333.2 246 72.4
MELO3C014882.2 Cucumis melo HOM05D005629 ORTHO05D008000 1.6e-87 327.0 248 69.8
CARHR148330 Cardamine hirsuta HOM05D005629 ORTHO05D008000 1.4e-86 323.9 221 74.2
FAN14G4117 Fragaria x ananassa HOM05D005629 ORTHO05D008000 3.9e-81 305.8 301 58.5
PRCOL_00001739 Prasinoderma coloniale HOM05D005629 ORTHO05D008000 2.2e-76 290.0 272 51.8
Lsat_1_v5_gn_9_1240 Lactuca sativa HOM05D005629 ORTHO05D008000 1.3e-73 280.8 159 86.2
CDE05G1086 Ceratophyllum demersum HOM05D001132 ORTHO05D002510 1.3e-68 264.2 196 71.4
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 2.6e-61 240.0 205 61.5
Migut.K01251 Erythranthe guttata HOM05D005629 ORTHO05D008000 6.7e-57 225.3 159 74.2
Zm00001eb427710 Zea mays HOM05D005629 ORTHO05D003422 2.5e-51 206.8 120 81.7
Zm00001eb174780 Zea mays HOM05D005629 ORTHO05D008000 4.6e-50 202.6 121 80.2
FvH4_6g53390 Fragaria vesca HOM05D005629 ORTHO05D022663 7.9e-50 201.8 324 41.7
TAR622G1261 Trochodendron aralioides HOM05D005629 ORTHO05D008000 5.1e-49 199.1 119 84.0
Zm00001eb146790 Zea mays HOM05D005629 ORTHO05D003607 1.1e-48 198.0 116 83.6
FvH4_6g53350 Fragaria vesca HOM05D005629 ORTHO05D022663 3.3e-48 196.4 324 41.7
FvH4_6g53420 Fragaria vesca HOM05D005629 ORTHO05D022663 2.8e-47 193.4 223 50.2
Zm00001eb332250 Zea mays HOM05D002343 ORTHO05D002443 2.4e-46 190.3 128 73.4
FAN14G1519 Fragaria x ananassa HOM05D005629 ORTHO05D022663 1.4e-33 147.9 294 36.4
CDE02G4678 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 1.3e-31 141.4 231 40.3
FAN02G3684 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.2e-31 140.6 82 81.7
PRCOL_00005410 Prasinoderma coloniale HOM05D005629 ORTHO05D333266 2.6e-29 133.7 295 31.5
arahy.Tifrunner.gnm1.ann1.0H9GWB Arachis hypogaea HOM05D005629 ORTHO05D008000 7.2e-27 125.6 76 77.6
MELO3C032122.2 Cucumis melo HOM05D005629 ORTHO05D008000 1.2e-26 124.8 63 92.1
Zm00001eb048250 Zea mays HOM05D005629 ORTHO05D008000 8.8e-25 118.6 71 78.9
AagrBONN_evm.TU.Sc2ySwM_228.873 Anthoceros agrestis HOM05D005629 ORTHO05D008000 7.4e-24 115.5 334 26.6
Lsat_1_v5_gn_0_46360 Lactuca sativa HOM05D005629 ORTHO05D008000 2.0e-21 107.5 94 61.7
FAN02G2357 Fragaria x ananassa HOM05D005629 ORTHO05D008000 9.4e-19 98.6 107 49.5
A02p35090 Brassica napus HOM05D005629 ORTHO05D008000 1.8e-17 94.4 81 65.4
BraA02t08515Z Brassica rapa HOM05D005629 ORTHO05D008000 2.0e-16 90.9 75 66.7
CAN.G792.7 Capsicum annuum HOM05D002518 ORTHO05D002630 6.8e-09 65.9 47 68.1
BolC2t11443H Brassica oleracea HOM05D005629 ORTHO05D008000 7.5e-08 62.4 53 64.2
Zm00001eb059400 Zea mays HOM05D003056 ORTHO05D003422 8.3e-07 58.9 60 58.3


User provided reference genes

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