Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 4.0e-249 864.4 464 100.0
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 9.6e-235 816.6 472 94.3
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 1.9e-129 466.8 379 67.0
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 4.2e-129 465.7 377 67.6
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 5.5e-129 465.3 340 69.7
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.7e-128 463.0 379 66.2
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 4.6e-128 462.2 379 64.9
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 5.1e-127 458.8 427 60.2
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 6.7e-127 458.4 379 65.2
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 1.1e-124 451.1 374 65.5
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 1.1e-124 451.1 373 65.1
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.4e-124 449.9 372 65.6
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 4.0e-124 449.1 381 64.6
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 5.3e-124 448.7 372 66.1
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 5.3e-124 448.7 380 62.6
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 5.3e-124 448.7 380 64.7
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 9.0e-124 448.0 342 68.7
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 9.0e-124 448.0 372 65.3
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 1.2e-123 447.6 375 65.1
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 2.6e-123 446.4 404 62.4
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.6e-123 446.4 368 65.2
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 3.4e-123 446.0 343 70.6
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 3.4e-123 446.0 370 65.7
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 4.5e-123 445.7 380 63.7
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 7.6e-123 444.9 343 69.7
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.3e-122 444.1 377 65.5
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 1.7e-122 443.7 343 70.6
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 2.2e-122 443.4 455 58.9
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 2.2e-122 443.4 380 63.9
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.9e-122 443.0 381 63.0
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 3.8e-122 442.6 371 65.5
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 3.8e-122 442.6 383 62.9
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 8.4e-122 441.4 380 63.9
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.4e-121 440.7 380 62.1
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 1.9e-121 440.3 381 62.7
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.5e-121 439.9 373 62.7
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 3.2e-121 439.5 381 62.5
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 3.2e-121 439.5 386 62.7
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 5.5e-121 438.7 380 64.5
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.5e-121 438.7 380 61.8
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 9.3e-121 438.0 383 62.1
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 9.3e-121 438.0 380 62.6
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 9.3e-121 438.0 380 62.9
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.2e-120 437.6 374 64.7
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 1.6e-120 437.2 371 63.1
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 1.6e-120 437.2 433 58.0
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.6e-120 437.2 380 62.1
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 3.5e-120 436.0 374 65.2
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 7.9e-120 434.9 436 57.1
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.1e-118 431.0 380 62.1
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.1e-118 431.0 381 61.4
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.1e-118 431.0 374 62.0
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.5e-118 429.9 375 62.1
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 3.3e-118 429.5 373 64.1
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 4.3e-118 429.1 374 63.6
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 4.3e-118 429.1 425 58.4
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 5.7e-118 428.7 383 61.4
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 5.7e-118 428.7 451 54.8
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 7.4e-118 428.3 378 61.9
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.3e-117 427.6 380 62.1
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.6e-117 427.2 374 62.0
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 2.8e-117 426.4 355 63.9
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 2.8e-117 426.4 344 66.0
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 3.7e-117 426.0 377 61.8
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 4.8e-117 425.6 378 61.4
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 6.3e-117 425.2 338 65.7
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.1e-116 424.5 346 65.3
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.1e-116 424.5 374 62.3
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.4e-116 424.1 342 65.5
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 1.8e-116 423.7 380 61.3
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 2.4e-116 423.3 346 65.0
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 3.1e-116 422.9 368 62.8
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 4.1e-116 422.5 382 62.3
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 4.1e-116 422.5 371 62.5
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 9.0e-116 421.4 333 68.5
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.6e-115 419.9 340 65.0
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 3.4e-115 419.5 381 60.9
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 3.4e-115 419.5 351 65.0
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 5.9e-115 418.7 349 64.5
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.0e-114 417.9 377 60.5
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 2.2e-114 416.8 385 59.0
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 3.8e-114 416.0 377 62.3
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 1.1e-113 414.5 305 73.1
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 1.1e-113 414.5 329 65.7
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 4.2e-113 412.5 373 61.9
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 5.5e-113 412.1 337 66.2
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.6e-112 410.6 372 59.9
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 4.3e-110 402.5 351 62.1
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.4e-108 397.5 363 61.4
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 4.2e-105 386.0 384 57.0
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 2.1e-104 383.6 374 58.8
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 1.4e-100 370.9 294 67.0
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 1.3e-90 337.8 370 55.1
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 1.9e-89 334.0 344 56.7
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 9.7e-86 321.6 241 69.7
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 7.7e-83 312.0 365 50.1
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 1.0e-82 311.6 384 49.7
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 8.5e-82 308.5 236 69.1
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 2.5e-81 307.0 370 50.3
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.2e-71 272.7 211 68.2
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 3.5e-67 260.0 361 44.6
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.7e-66 257.7 202 66.8
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 1.8e-63 247.7 341 44.3
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 3.0e-63 246.9 211 64.9
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 2.2e-61 240.7 347 39.2
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.8e-56 223.8 339 42.2
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 8.9e-55 218.8 213 55.4
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 1.4e-44 184.9 178 61.8
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 3.1e-39 167.2 185 53.5
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.2e-32 145.2 246 39.0
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 3.0e-26 124.0 81 72.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 3.1e-23 114.0 95 65.3
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 5.8e-22 109.8 102 62.7
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 3.5e-19 100.5 355 28.2
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.8e-18 98.2 104 53.8
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.5e-17 94.4 350 28.0
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 6.2e-16 89.7 153 41.8
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 7.6e-14 82.8 111 47.7
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 6.2e-08 63.2 142 35.9
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 3.4e-06 57.4 35 71.4


User provided reference genes

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