Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 4.1e-72 274.6 138 100.0
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 4.5e-71 271.2 138 98.6
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 4.7e-60 234.6 138 86.2
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 8.8e-59 230.3 138 84.8
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 1.5e-58 229.6 138 84.8
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 7.4e-58 227.3 138 83.3
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 1.3e-57 226.5 138 84.1
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 1.7e-57 226.1 138 81.9
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 2.8e-57 225.3 138 82.6
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 3.7e-57 224.9 138 83.3
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 3.7e-57 224.9 137 83.2
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 4.8e-57 224.6 138 81.2
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 6.3e-57 224.2 138 82.6
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.1e-56 223.4 138 81.2
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 1.1e-56 223.4 137 81.8
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 5.3e-56 221.1 138 81.2
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 5.3e-56 221.1 138 80.4
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 5.3e-56 221.1 137 82.5
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 1.5e-55 219.5 138 80.4
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.5e-55 219.5 137 81.8
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 2.6e-55 218.8 135 83.0
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.6e-55 218.8 137 79.6
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 2.6e-55 218.8 137 80.3
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 3.5e-55 218.4 137 79.6
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 7.7e-55 217.2 138 79.0
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 1.0e-54 216.9 125 84.0
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 1.3e-54 216.5 137 79.6
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.7e-54 216.1 137 80.3
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 1.7e-54 216.1 137 80.3
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 1.7e-54 216.1 137 78.1
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 3.8e-54 214.9 138 79.0
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 5.0e-54 214.5 141 78.0
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 8.5e-54 213.8 128 80.5
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 8.5e-54 213.8 125 82.4
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 1.5e-53 213.0 138 78.3
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 3.2e-53 211.8 134 77.6
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 4.2e-53 211.5 138 77.5
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 5.5e-53 211.1 134 77.6
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 7.2e-53 210.7 135 75.6
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 7.2e-53 210.7 136 78.7
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 7.2e-53 210.7 138 77.5
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 7.2e-53 210.7 137 78.1
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 7.2e-53 210.7 137 78.1
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 9.4e-53 210.3 139 79.1
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 3.6e-52 208.4 125 80.8
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 3.6e-52 208.4 137 75.9
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 4.7e-52 208.0 138 76.1
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 6.1e-52 207.6 136 77.9
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 8.0e-52 207.2 137 76.6
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 8.0e-52 207.2 136 75.7
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 1.0e-51 206.8 139 74.1
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.0e-51 206.8 137 76.6
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 1.4e-51 206.5 139 75.5
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.4e-51 206.5 139 75.5
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 2.3e-51 205.7 136 77.2
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.3e-51 205.7 139 74.8
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 3.9e-51 204.9 139 75.5
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 5.2e-51 204.5 137 75.9
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 8.8e-51 203.8 128 78.9
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 8.8e-51 203.8 122 81.1
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 8.8e-51 203.8 139 74.1
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 2.0e-50 202.6 138 75.4
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.6e-50 202.2 139 74.8
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 5.7e-50 201.1 135 75.6
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 7.4e-50 200.7 137 73.7
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 7.4e-50 200.7 165 66.7
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 9.7e-50 200.3 135 73.3
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 9.7e-50 200.3 137 74.5
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 9.7e-50 200.3 137 74.5
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 1.3e-49 199.9 133 77.4
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 2.2e-49 199.1 135 71.1
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 2.2e-49 199.1 137 74.5
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 2.8e-49 198.7 138 73.9
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 2.8e-49 198.7 135 72.6
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 3.7e-49 198.4 135 71.9
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 3.7e-49 198.4 135 71.9
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 4.8e-49 198.0 140 72.1
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 4.8e-49 198.0 139 71.9
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 8.2e-49 197.2 135 71.9
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 1.1e-48 196.8 135 71.1
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 1.8e-48 196.1 135 70.4
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 1.8e-48 196.1 135 70.4
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 1.8e-48 196.1 125 74.4
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 2.4e-48 195.7 137 74.5
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 4.1e-48 194.9 135 70.4
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 4.1e-48 194.9 132 75.0
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 5.3e-48 194.5 135 70.4
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 1.6e-47 193.0 128 74.2
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 5.9e-47 191.0 135 70.4
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 7.7e-47 190.7 138 71.7
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 1.0e-46 190.3 135 69.6
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 1.0e-46 190.3 138 71.0
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 2.2e-46 189.1 118 79.7
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 2.2e-46 189.1 138 70.3
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 2.9e-46 188.7 122 77.9
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 3.8e-46 188.3 122 76.2
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 6.5e-46 187.6 137 69.3
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 8.5e-46 187.2 137 70.8
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 1.1e-45 186.8 130 70.8
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 2.5e-45 185.7 135 69.6
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 5.5e-45 184.5 134 69.4
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 6.1e-44 181.0 107 83.2
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 6.1e-44 181.0 133 69.9
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 1.2e-42 176.8 114 74.6
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.5e-42 176.4 124 73.4
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 4.4e-42 174.9 126 69.0
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 5.7e-42 174.5 121 72.7
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 9.1e-40 167.2 134 66.4
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 8.5e-38 160.6 137 62.8
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 1.1e-37 160.2 118 66.1
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 8.0e-36 154.1 134 58.2
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 7.5e-34 147.5 135 60.7
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 9.1e-32 140.6 117 59.8
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.9e-30 135.6 84 73.8
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 2.9e-30 135.6 140 55.0
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 3.8e-30 135.2 119 58.0
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 1.5e-29 133.3 145 51.7
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 9.5e-29 130.6 137 55.5
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 6.8e-27 124.4 99 62.6
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 8.9e-27 124.0 104 58.7
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 1.3e-25 120.2 122 54.9
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.9e-25 119.0 137 53.3
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.4e-24 116.7 122 55.7
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 1.8e-24 116.3 109 53.2
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 7.0e-24 114.4 80 72.5
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 6.8e-19 97.8 72 76.4
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 6.8e-19 97.8 85 58.8
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-18 95.9 137 42.3
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 6.2e-12 74.7 54 61.1
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 4.9e-09 65.1 116 37.9
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 6.4e-09 64.7 40 72.5
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 7.8e-07 57.8 35 74.3


User provided reference genes

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