Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 0.0e+00 1075.8 572 100.0
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 2.9e-289 998.0 554 96.8
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 3.3e-192 675.6 530 68.1
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 8.1e-191 671.0 529 67.9
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 3.1e-150 536.2 528 56.1
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 2.9e-148 529.6 517 55.3
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 1.9e-147 526.9 521 54.5
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.2e-146 524.2 526 53.4
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 7.9e-146 521.5 517 54.2
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 2.2e-143 513.5 550 52.4
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 3.7e-143 512.7 527 55.2
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 2.4e-142 510.0 553 51.4
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 4.1e-142 509.2 526 55.1
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 5.3e-142 508.8 517 53.6
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.9e-140 503.1 533 50.8
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 1.1e-139 501.1 531 53.9
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 9.4e-139 498.0 531 51.6
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 4.6e-138 495.7 519 51.8
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 3.3e-136 489.6 512 52.5
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.3e-136 489.6 531 52.7
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 1.3e-135 487.6 557 48.8
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 5.9e-133 478.8 531 49.3
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.0e-132 478.0 532 48.9
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 2.9e-132 476.5 524 51.5
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 8.5e-132 474.9 524 50.6
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 1.9e-131 473.8 552 48.4
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 6.1e-130 468.8 521 50.3
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 6.1e-130 468.8 521 50.3
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.3e-129 466.8 522 52.7
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.1e-128 464.5 532 49.8
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 4.4e-128 462.6 519 50.9
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 1.7e-127 460.7 520 49.6
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 2.8e-127 459.9 519 48.9
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.8e-127 459.9 520 49.6
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.8e-127 459.9 528 48.7
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 6.3e-127 458.8 520 49.0
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 1.8e-126 457.2 514 49.4
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 2.4e-126 456.8 521 49.5
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 5.3e-126 455.7 520 50.0
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 7.0e-126 455.3 519 50.1
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 1.2e-125 454.5 519 49.1
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.0e-124 451.4 532 48.9
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.8e-124 449.5 410 59.0
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 3.8e-124 449.5 531 48.2
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 5.0e-124 449.1 519 49.1
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 8.5e-124 448.4 533 47.3
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.5e-123 447.6 530 48.1
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 5.5e-123 445.7 525 48.2
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 9.4e-123 444.9 522 48.9
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 2.1e-122 443.7 534 48.1
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 1.8e-121 440.7 524 46.9
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 1.1e-120 438.0 589 46.0
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 4.4e-120 436.0 519 47.2
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.4e-120 436.0 516 46.9
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 2.8e-119 433.3 538 47.0
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 6.3e-119 432.2 523 47.4
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-118 431.0 519 46.8
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.4e-118 431.0 516 46.3
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.4e-118 431.0 516 46.3
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 1.8e-118 430.6 525 45.9
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 3.1e-118 429.9 521 46.6
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 5.3e-118 429.1 516 46.1
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 7.0e-118 428.7 529 47.8
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 7.7e-117 425.2 519 46.2
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 1.0e-116 424.9 520 46.9
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 3.8e-116 422.9 532 46.1
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.9e-115 420.6 520 46.3
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 2.5e-115 420.2 520 46.2
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 7.2e-115 418.7 504 47.8
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 7.2e-115 418.7 530 47.0
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 9.4e-115 418.3 522 46.2
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 9.4e-115 418.3 528 46.8
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 9.4e-115 418.3 543 44.4
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 2.7e-114 416.8 521 46.4
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 8.0e-114 415.2 523 44.4
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 8.0e-114 415.2 508 48.6
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 1.0e-113 414.8 555 45.0
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 4.0e-113 412.9 411 54.0
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 4.0e-113 412.9 516 45.9
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.5e-112 411.0 516 45.2
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 3.4e-112 409.8 516 45.2
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 3.4e-112 409.8 518 46.3
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 2.2e-111 407.1 530 44.5
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 1.1e-110 404.8 527 46.5
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 3.1e-110 403.3 525 43.6
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 3.1e-110 403.3 527 46.5
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 5.3e-110 402.5 519 44.7
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 9.1e-110 401.7 521 44.7
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 5.9e-109 399.1 537 46.0
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 7.7e-109 398.7 533 43.2
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.2e-108 397.1 527 46.1
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.2e-107 393.3 365 61.6
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 8.8e-105 385.2 513 43.3
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 5.7e-104 382.5 521 43.8
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.3e-103 381.3 389 54.5
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 4.8e-103 379.4 525 43.2
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 8.3e-103 378.6 519 44.3
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 8.6e-100 368.6 523 41.3
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 9.5e-99 365.2 524 41.4
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 2.3e-97 360.5 513 40.9
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 3.0e-97 360.1 512 43.4
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 6.8e-97 359.0 529 39.5
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 1.5e-96 357.8 521 39.7
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 2.6e-96 357.1 331 57.1
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 5.7e-96 355.9 533 38.5
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 6.3e-95 352.4 521 38.2
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 6.3e-95 352.4 521 39.2
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.8e-94 350.9 404 49.0
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 2.4e-94 350.5 534 38.8
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 7.0e-94 349.0 521 39.2
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.2e-93 348.2 522 39.1
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 2.0e-93 347.4 535 40.2
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 3.9e-92 343.2 421 45.1
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 6.6e-92 342.4 520 42.7
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 2.5e-91 340.5 511 39.5
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 4.3e-91 339.7 526 40.9
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 1.2e-90 338.2 525 42.5
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 8.0e-90 335.5 403 45.2
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 1.0e-89 335.1 524 38.2
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 3.1e-89 333.6 402 47.5
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 1.5e-88 331.3 409 47.2
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.4e-86 324.7 427 43.6
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.3e-84 318.2 266 65.4
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 1.2e-77 295.0 511 36.8
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 1.6e-74 284.6 515 35.3
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 6.8e-73 279.3 507 35.9
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.9e-71 273.9 262 56.1
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 5.1e-68 263.1 414 37.9
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.5e-67 261.5 329 48.3
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.8e-65 254.6 427 36.8
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.3e-58 231.9 250 51.2
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 2.1e-45 188.0 333 35.1
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 6.0e-45 186.4 346 34.1
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 6.7e-44 183.0 248 43.1
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 5.3e-41 173.3 442 28.3
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.0e-39 169.1 193 48.7
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.8e-36 158.3 210 43.3
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.3e-34 152.1 164 51.2
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.1e-34 151.4 150 48.7
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 2.8e-34 151.0 510 25.3
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.2e-32 145.6 153 54.9
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.0e-32 144.8 153 54.9
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 5.8e-32 143.3 524 25.8
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 2.2e-31 141.4 162 43.2
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 1.9e-30 138.3 525 24.2
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 6.7e-28 129.8 152 50.0
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 9.7e-27 125.9 148 46.6
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 4.8e-26 123.6 536 23.3
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.1e-25 120.9 162 43.8
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 6.9e-25 119.8 139 49.6
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 3.4e-24 117.5 142 43.7
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 4.5e-24 117.1 157 37.6
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.5e-24 117.1 118 57.6
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 9.4e-22 109.4 163 41.7
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.7e-21 107.8 123 48.8
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 3.9e-20 104.0 101 53.5
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 5.1e-20 103.6 162 41.4
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 6.7e-20 103.2 472 23.9
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 2.0e-19 101.7 95 57.9
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 9.7e-19 99.4 127 46.5
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 6.3e-18 96.7 133 43.6
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.1e-17 94.4 101 55.4
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 3.4e-16 90.9 134 40.3
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 5.9e-16 90.1 460 22.8
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.0e-15 89.4 487 21.6
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 1.1e-14 85.9 123 40.7
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 7.2e-14 83.2 67 59.7
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.1e-13 81.6 84 51.2
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 2.7e-13 81.3 160 31.9
AagrBONN_evm.TU.Sc2ySwM_228.1577 Anthoceros agrestis HOM05D003578 ORTHO05D004021 1.4e-12 79.0 369 24.4
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 1.8e-12 78.6 211 26.5
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 5.7e-11 73.6 111 39.6
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 5.7e-11 73.6 111 38.7
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.2e-10 71.6 65 56.9
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.2e-10 71.6 65 56.9
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 8.2e-10 69.7 71 60.6
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 9.1e-09 66.2 68 55.9
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 2.0e-08 65.1 82 37.8
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 1.0e-07 62.8 78 41.0
Sopen01g047030 Solanum pennellii HOM05D003578 ORTHO05D004021 1.0e-07 62.8 96 39.6
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 1.1e-06 59.3 54 55.6


User provided reference genes

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