Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2836 Papaver somniferum HOM05D004762 ORTHO05D005972 4.3e-152 541.2 254 100.0
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 1.2e-151 539.7 253 99.6
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 5.8e-149 530.8 253 97.6
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 9.2e-147 523.5 253 94.9
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 1.2e-146 523.1 253 95.3
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 2.1e-119 432.6 253 77.1
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 4.8e-119 431.4 251 77.3
Dinv21748 Davidia involucrata HOM05D004762 ORTHO05D005972 7.6e-117 424.1 247 74.9
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 1.3e-116 423.3 255 73.3
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 2.2e-116 422.5 249 73.9
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 6.5e-116 421.0 249 74.7
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 2.5e-115 419.1 251 75.3
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 4.2e-115 418.3 247 74.1
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 2.7e-114 415.6 235 78.7
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 2.7e-114 415.6 251 72.1
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 3.5e-114 415.2 251 73.3
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 1.0e-113 413.7 251 72.9
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 5.1e-113 411.4 252 73.0
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 6.7e-113 411.0 253 73.1
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 8.7e-113 410.6 253 72.3
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 1.1e-112 410.2 254 71.3
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 1.5e-112 409.8 253 73.5
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 2.5e-112 409.1 248 73.0
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 2.5e-112 409.1 253 72.7
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 3.3e-112 408.7 250 71.6
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 5.7e-112 407.9 252 73.8
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 7.4e-112 407.5 250 71.6
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 9.6e-112 407.1 248 71.8
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 1.6e-111 406.4 254 71.7
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 2.1e-111 406.0 254 72.8
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 2.1e-111 406.0 254 72.8
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 2.1e-111 406.0 253 72.7
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.1e-111 406.0 250 71.6
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 4.8e-111 404.8 249 71.9
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 6.3e-111 404.4 252 72.2
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 1.4e-110 403.3 252 72.2
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 2.4e-110 402.5 253 72.3
MELO3C018365.2 Cucumis melo HOM05D004762 ORTHO05D005972 2.4e-110 402.5 253 71.1
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 2.4e-110 402.5 253 70.0
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 3.1e-110 402.1 250 70.4
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 3.1e-110 402.1 249 71.1
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.1e-110 402.1 246 72.0
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 4.1e-110 401.7 248 69.8
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 5.3e-110 401.4 253 71.1
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 6.9e-110 401.0 253 70.8
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 1.5e-109 399.8 254 70.9
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 1.5e-109 399.8 283 66.4
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 2.0e-109 399.4 245 71.8
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 2.6e-109 399.1 248 72.6
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 3.4e-109 398.7 253 69.2
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 5.9e-109 397.9 248 73.8
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 5.9e-109 397.9 253 70.8
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 1.0e-108 397.1 248 69.8
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 1.3e-108 396.7 219 79.5
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 1.7e-108 396.4 248 69.8
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 1.7e-108 396.4 253 70.4
Sopen10g028440 Solanum pennellii HOM05D004762 ORTHO05D005972 1.7e-108 396.4 259 69.9
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 1.7e-108 396.4 248 69.8
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.2e-108 396.0 248 71.4
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 2.9e-108 395.6 253 68.4
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 5.0e-108 394.8 252 71.0
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 6.5e-108 394.4 252 71.0
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 1.9e-107 392.9 248 71.8
SGA_v2.0_scaffold44G16679 Striga asiatica HOM05D004762 ORTHO05D005972 4.2e-107 391.7 245 70.2
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 5.5e-107 391.3 253 68.8
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 7.2e-107 391.0 248 71.8
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 9.3e-107 390.6 248 71.4
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 9.3e-107 390.6 248 71.4
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 9.3e-107 390.6 253 67.6
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 9.3e-107 390.6 253 68.4
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 2.1e-106 389.4 251 70.1
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 3.5e-106 388.7 247 68.4
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 4.6e-106 388.3 253 68.8
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 6.1e-106 387.9 253 68.4
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 6.1e-106 387.9 248 69.8
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 1.3e-105 386.7 257 70.4
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 1.3e-105 386.7 244 70.5
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 1.3e-105 386.7 251 69.7
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 1.8e-105 386.3 253 68.0
DCAR_007786 Daucus carota HOM05D004762 ORTHO05D005972 1.8e-105 386.3 244 70.1
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 2.3e-105 386.0 253 68.4
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 3.9e-105 385.2 253 68.8
CARHR135230 Cardamine hirsuta HOM05D004762 ORTHO05D005972 6.7e-105 384.4 253 67.6
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 8.7e-105 384.0 253 67.2
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 8.7e-105 384.0 253 67.6
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 1.1e-104 383.6 253 67.2
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 1.9e-104 382.9 253 66.4
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 2.5e-104 382.5 253 66.8
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 9.7e-104 380.6 253 66.8
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 1.3e-103 380.2 218 75.7
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 1.6e-103 379.8 286 62.6
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 3.7e-103 378.6 253 65.6
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 3.7e-103 378.6 253 65.6
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 6.3e-103 377.9 223 72.6
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 2.6e-101 372.5 249 66.7
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 3.4e-101 372.1 249 67.5
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 5.9e-101 371.3 244 68.4
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 5.5e-99 364.8 300 58.7
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 9.4e-99 364.0 218 72.5
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.0e-97 360.5 248 66.5
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 3.0e-97 359.0 323 54.5
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 1.5e-96 356.7 251 64.1
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 2.4e-94 349.4 392 47.4
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 6.5e-92 341.3 244 61.5
Actinidia33916 Actinidia chinensis HOM05D004762 ORTHO05D005972 3.2e-91 339.0 254 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 1.7e-84 316.6 237 62.0
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 4.2e-83 312.0 244 59.4
Mapoly0096s0017 Marchantia polymorpha HOM05D004762 ORTHO05D005972 1.2e-82 310.5 253 56.5
AUR62022908 Chenopodium quinoa HOM05D004762 ORTHO05D005972 7.7e-77 291.2 170 74.1
TPR.G15355 Trifolium pratense HOM05D004762 ORTHO05D005972 2.7e-74 282.7 153 78.4
BcaC02g12136 Brassica carinata HOM05D004762 ORTHO05D005972 1.0e-73 280.8 230 59.1
SMO358G0322 Selaginella moellendorffii HOM05D004762 ORTHO05D005972 5.2e-73 278.5 245 55.9
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 1.3e-71 273.9 242 53.7
Hma1.2p1_2705F.1_g327160 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.7e-71 273.5 154 78.6
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 1.6e-69 266.9 178 64.0
Cpa.g.sc1441.3 Carica papaya HOM05D004762 ORTHO05D005972 1.9e-67 260.0 158 73.4
Aqoxy4G02491 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 8.0e-66 254.6 202 65.3
MCO10G125 Micromonas commoda HOM05D004762 ORTHO05D005972 6.6e-60 235.0 219 51.6
PRCOL_00001728 Prasinoderma coloniale HOM05D004762 ORTHO05D005972 2.0e-56 223.4 222 48.2
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 3.1e-49 199.5 249 39.0
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 1.3e-44 184.1 246 43.5
Phvul.010G113266 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 1.5e-40 170.6 119 63.0
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 7.8e-37 158.3 248 35.9
TPR.G10834 Trifolium pratense HOM05D004762 ORTHO05D005972 1.7e-31 140.6 87 70.1
Hma1.2p1_0812F.1_g222370 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.3e-28 131.0 93 63.4
Nitab4.5_0001180g0090 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.0e-28 129.8 93 61.3
Aqoxy4G02490 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 8.4e-23 111.7 58 77.6
Os12g0583000 Oryza sativa ssp. japonica HOM05D004762 ORTHO05D005972 1.7e-15 87.4 48 66.7
Gohir.D08G135600 Gossypium hirsutum HOM05D004762 ORTHO05D005972 6.2e-10 68.9 37 73.0
Gorai.004G138800 Gossypium raimondii HOM05D004762 ORTHO05D005972 6.2e-10 68.9 44 63.6
Gohir.D06G056233 Gossypium hirsutum HOM05D004762 ORTHO05D005972 4.0e-09 66.2 44 61.4
GSVIVG01022727001 Vitis vinifera HOM05D004762 ORTHO05D005972 2.6e-08 63.5 51 58.8


User provided reference genes

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